RNA–Protein interactions for RNA: YDR487C

RIB3, Transcript of 3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase), yeast

Gene RIB3, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIB3	YDR487C	URA3	P03962	267 aa		7.72	□□□□□ -1.17
RIB3	YDR487C	HEM13	P11353	328 aa	Known RBP	7.72	□□□□□ -1.17
RIB3	YDR487C	RPL3	P14126	387 aa	Known RBP	7.72	□□□□□ -1.17
RIB3	YDR487C	CKA1	P15790	372 aa		7.72	□□□□□ -1.17
RIB3	YDR487C	REC104	P33323	182 aa		7.72	□□□□□ -1.17
RIB3	YDR487C	YUH1	P35127	236 aa		7.72	□□□□□ -1.17
RIB3	YDR487C	UTP30	P36144	274 aa	Known RBP	7.72	□□□□□ -1.17
RIB3	YDR487C	MBA1	P38300	278 aa		7.72	□□□□□ -1.17
RIB3	YDR487C	HPA3	P39979	161 aa		7.72	□□□□□ -1.17
RIB3	YDR487C	YFL054C	P43549	646 aa		7.72	□□□□□ -1.17
RIB3	YDR487C	YNL234W	P53857	426 aa		7.72	□□□□□ -1.17
RIB3	YDR487C	GIM3	P53900	129 aa		7.72	□□□□□ -1.17
RIB3	YDR487C	NGL2	Q03264	515 aa	Known RBP	7.72	□□□□□ -1.17
RIB3	YDR487C	YML018C	Q03730	393 aa		7.72	□□□□□ -1.17
RIB3	YDR487C	TSA2	Q04120	196 aa		7.72	□□□□□ -1.17
RIB3	YDR487C	RGC1	Q06108	1083 aa	Known RBP	7.72	□□□□□ -1.17
RIB3	YDR487C	SOG2	Q08817	791 aa		7.72	□□□□□ -1.17
RIB3	YDR487C	YLR365W	Q7LIF2	110 aa		7.72	□□□□□ -1.17
RIB3	YDR487C	LSB5	P25369	354 aa		7.71	□□□□□ -1.18
RIB3	YDR487C	FEN2	P25621	512 aa	Known RBP	7.71	□□□□□ -1.18
RIB3	YDR487C	YCR061W	P25639	631 aa		7.71	□□□□□ -1.18
RIB3	YDR487C	RAD23	P32628	398 aa	Known RBP	7.71	□□□□□ -1.18
RIB3	YDR487C	PCL7	P40186	285 aa		7.71	□□□□□ -1.18
RIB3	YDR487C	PRM5	P40476	318 aa		7.71	□□□□□ -1.18
RIB3	YDR487C	SER2	P42941	309 aa		7.71	□□□□□ -1.18
RIB3	YDR487C	DIE2	P50076	525 aa		7.71	□□□□□ -1.18
RIB3	YDR487C	STD1	Q02794	444 aa		7.71	□□□□□ -1.18
RIB3	YDR487C	DAL4	Q04895	635 aa		7.71	□□□□□ -1.18
RIB3	YDR487C	FMP42	Q04991	504 aa		7.71	□□□□□ -1.18
RIB3	YDR487C	ALG6	Q12001	544 aa	Known RBP	7.71	□□□□□ -1.18
RIB3	YDR487C	JID1	Q12350	301 aa		7.71	□□□□□ -1.18
RIB3	YDR487C	CUE1	P38428	203 aa		7.7	□□□□□ -1.18
RIB3	YDR487C	IKI1	P38874	309 aa		7.7	□□□□□ -1.18
RIB3	YDR487C	FCY21	P40039	528 aa		7.7	□□□□□ -1.18
RIB3	YDR487C	YJL118W	P47022	219 aa		7.7	□□□□□ -1.18
RIB3	YDR487C	IRC18	P47056	224 aa		7.7	□□□□□ -1.18
RIB3	YDR487C	LPP1	Q04396	274 aa		7.7	□□□□□ -1.18
RIB3	YDR487C	YFH1	Q07540	174 aa		7.7	□□□□□ -1.18
RIB3	YDR487C	MED4	Q12343	284 aa		7.7	□□□□□ -1.18
RIB3	YDR487C	SEN2	P16658	377 aa		7.69	□□□□□ -1.18
RIB3	YDR487C	PUP1	P25043	261 aa		7.69	□□□□□ -1.18
RIB3	YDR487C	MRP20	P32387	263 aa		7.69	□□□□□ -1.18
RIB3	YDR487C	YHR122W	P38829	231 aa		7.69	□□□□□ -1.18
RIB3	YDR487C	MIT1	P40002	666 aa		7.69	□□□□□ -1.18
RIB3	YDR487C	AGE2	P40529	298 aa		7.69	□□□□□ -1.18
RIB3	YDR487C	YOR292C	Q08743	309 aa		7.69	□□□□□ -1.18
RIB3	YDR487C	YPL199C	Q08954	240 aa		7.69	□□□□□ -1.18
RIB3	YDR487C	YPR108W-A	Q3E7B3	70 aa		7.69	□□□□□ -1.18
RIB3	YDR487C	UBA3	Q99344	299 aa		7.69	□□□□□ -1.18
RIB3	YDR487C	ILV5	P06168	395 aa	Known RBP	7.68	□□□□□ -1.18
RIB3	YDR487C	YHK8	P38776	514 aa		7.68	□□□□□ -1.18
RIB3	YDR487C	RPL9B	P51401	191 aa	Known RBP	7.68	□□□□□ -1.18
RIB3	YDR487C	RSM27	P53305	110 aa		7.68	□□□□□ -1.18
RIB3	YDR487C	TY1A-MR1	Q04215	440 aa		7.68	□□□□□ -1.18
RIB3	YDR487C	HTZ1	Q12692	134 aa	Known RBP	7.68	□□□□□ -1.18
RIB3	YDR487C	GAL1	P04385	528 aa		7.67	□□□□□ -1.18
RIB3	YDR487C	VMA8	P32610	256 aa	Known RBP	7.67	□□□□□ -1.18
RIB3	YDR487C	RAI1	P53063	387 aa	Known RBP	7.67	□□□□□ -1.18
RIB3	YDR487C	MRPL22	P53881	309 aa		7.67	□□□□□ -1.18
RIB3	YDR487C	MEH1	Q02205	184 aa		7.67	□□□□□ -1.18
RIB3	YDR487C	SPG4	Q04438	115 aa		7.67	□□□□□ -1.18
RIB3	YDR487C	NGL1	Q08213	363 aa	Known RBP	7.67	□□□□□ -1.18
RIB3	YDR487C	PET20	Q99373	253 aa		7.67	□□□□□ -1.18
RIB3	YDR487C	RPN13	O13563	156 aa		7.66	□□□□□ -1.18
RIB3	YDR487C	TRR1	P29509	319 aa	Known RBP	7.66	□□□□□ -1.18
RIB3	YDR487C	UTP11	P34247	250 aa	Predicted RBP	7.66	□□□□□ -1.18
RIB3	YDR487C	SRY1	P36007	326 aa		7.66	□□□□□ -1.18
RIB3	YDR487C	MRPL27	P36526	146 aa	Predicted RBP	7.66	□□□□□ -1.18
RIB3	YDR487C	IPI1	P38803	334 aa	Predicted RBP	7.66	□□□□□ -1.18
RIB3	YDR487C	RPA34	P47006	233 aa	Predicted RBP	7.66	□□□□□ -1.18
RIB3	YDR487C	AIM25	P47140	327 aa		7.66	□□□□□ -1.18
RIB3	YDR487C	CWC23	P52868	283 aa	Predicted RBP	7.66	□□□□□ -1.18
RIB3	YDR487C	MRPL13	Q02204	264 aa		7.66	□□□□□ -1.18
RIB3	YDR487C	ASM4	Q05166	528 aa		7.66	□□□□□ -1.18
RIB3	YDR487C	RPL9A	P05738	191 aa	Known RBP	7.65	□□□□□ -1.18
RIB3	YDR487C	TAL1	P15019	335 aa	Known RBP	7.65	□□□□□ -1.18
RIB3	YDR487C	CDC23	P16522	626 aa		7.65	□□□□□ -1.18
RIB3	YDR487C	FMT1	P32785	401 aa		7.65	□□□□□ -1.18
RIB3	YDR487C	POP2	P39008	433 aa		7.65	□□□□□ -1.18
RIB3	YDR487C	TY1A-DR2	Q03964	440 aa	Known RBP	7.65	□□□□□ -1.18
RIB3	YDR487C	AEP3	Q12089	606 aa		7.65	□□□□□ -1.18
RIB3	YDR487C	HUG1	Q6Q5K6	68 aa		7.65	□□□□□ -1.18
RIB3	YDR487C	ROX3	P25046	220 aa		7.64	□□□□□ -1.19
RIB3	YDR487C	RNA14	P25298	677 aa	Known RBP	7.64	□□□□□ -1.19
RIB3	YDR487C	SPS18	P32572	300 aa		7.64	□□□□□ -1.19
RIB3	YDR487C	PRS4	P38063	326 aa	Predicted RBP	7.64	□□□□□ -1.19
RIB3	YDR487C	MCH1	Q07376	486 aa		7.64	□□□□□ -1.19
RIB3	YDR487C	GPM1	P00950	247 aa	Known RBP	7.63	□□□□□ -1.19
RIB3	YDR487C	MIR1	P23641	311 aa	Known RBP	7.63	□□□□□ -1.19
RIB3	YDR487C	PAN3	P36102	679 aa	Predicted RBP	7.63	□□□□□ -1.19
RIB3	YDR487C	GLY1	P37303	387 aa	Known RBP	7.63	□□□□□ -1.19
RIB3	YDR487C	COS8	P38723	381 aa		7.63	□□□□□ -1.19
RIB3	YDR487C	YDL086W	Q07505	273 aa		7.63	□□□□□ -1.19
RIB3	YDR487C	SCP1	Q08873	200 aa		7.63	□□□□□ -1.19
RIB3	YDR487C	CYC1	P00044	109 aa	Predicted RBP	7.62	□□□□□ -1.19
RIB3	YDR487C	YMR31	P19955	123 aa		7.62	□□□□□ -1.19
RIB3	YDR487C	INO2	P26798	304 aa		7.62	□□□□□ -1.19
RIB3	YDR487C	YKL075C	P36083	450 aa		7.62	□□□□□ -1.19
RIB3	YDR487C	YHR138C	P38841	114 aa	Predicted RBP	7.62	□□□□□ -1.19
RIB3	YDR487C	LSM7	P53905	115 aa	Known RBP	7.62	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms