RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	ATG41	Q12048	136 aa		5.16	□□□□□ -1.58
CDC1	YDR182W	JID1	Q12350	301 aa		5.16	□□□□□ -1.58
CDC1	YDR182W	DPB2	P24482	689 aa	Predicted RBP	5.15	□□□□□ -1.58
CDC1	YDR182W	MIG1	P27705	504 aa		5.15	□□□□□ -1.58
CDC1	YDR182W	GOS1	P38736	223 aa		5.15	□□□□□ -1.58
CDC1	YDR182W	DDI1	P40087	428 aa		5.15	□□□□□ -1.58
CDC1	YDR182W	VHT1	P53241	593 aa		5.15	□□□□□ -1.58
CDC1	YDR182W	CWC25	P53854	179 aa	Known RBP	5.15	□□□□□ -1.58
CDC1	YDR182W	VPS71	Q03433	280 aa		5.15	□□□□□ -1.58
CDC1	YDR182W	GPN3	Q06543	272 aa		5.15	□□□□□ -1.58
CDC1	YDR182W	YCR061W	P25639	631 aa		5.14	□□□□□ -1.59
CDC1	YDR182W	ERG2	P32352	222 aa		5.14	□□□□□ -1.59
CDC1	YDR182W	PEX7	P39108	375 aa		5.14	□□□□□ -1.59
CDC1	YDR182W	SYS1	P41544	203 aa		5.14	□□□□□ -1.59
CDC1	YDR182W	STD1	Q02794	444 aa		5.14	□□□□□ -1.59
CDC1	YDR182W	SPG4	Q04438	115 aa		5.14	□□□□□ -1.59
CDC1	YDR182W	SWT1	Q12104	458 aa		5.14	□□□□□ -1.59
CDC1	YDR182W	YOS1	Q3E834	85 aa		5.14	□□□□□ -1.59
CDC1	YDR182W	REC104	P33323	182 aa		5.13	□□□□□ -1.59
CDC1	YDR182W	SMB1	P40018	196 aa	Known RBP	5.13	□□□□□ -1.59
CDC1	YDR182W	OTU1	P43558	301 aa		5.13	□□□□□ -1.59
CDC1	YDR182W	RPA43	P46669	326 aa		5.13	□□□□□ -1.59
CDC1	YDR182W	YIP1	P53039	248 aa		5.13	□□□□□ -1.59
CDC1	YDR182W	SLX9	P53251	210 aa	Predicted RBP	5.13	□□□□□ -1.59
CDC1	YDR182W	TSA2	Q04120	196 aa		5.13	□□□□□ -1.59
CDC1	YDR182W	MRPL35	Q06678	367 aa		5.13	□□□□□ -1.59
CDC1	YDR182W	AEP3	Q12089	606 aa		5.13	□□□□□ -1.59
CDC1	YDR182W	URA6	P15700	204 aa		5.13	□□□□□ -1.59
CDC1	YDR182W	FEN2	P25621	512 aa	Known RBP	5.13	□□□□□ -1.59
CDC1	YDR182W	RPB7	P34087	171 aa		5.13	□□□□□ -1.59
CDC1	YDR182W	ECM31	P38122	312 aa		5.13	□□□□□ -1.59
CDC1	YDR182W	ATG18	P43601	500 aa		5.13	□□□□□ -1.59
CDC1	YDR182W	RPS0B	P46654	252 aa	Known RBP	5.13	□□□□□ -1.59
CDC1	YDR182W	SOL1	P50278	321 aa		5.13	□□□□□ -1.59
CDC1	YDR182W	YPD1	Q07688	167 aa		5.13	□□□□□ -1.59
CDC1	YDR182W	INP53	Q12271	1107 aa		5.13	□□□□□ -1.59
CDC1	YDR182W	LAS17	Q12446	633 aa		5.13	□□□□□ -1.59
CDC1	YDR182W	RPD3	P32561	433 aa		5.12	□□□□□ -1.59
CDC1	YDR182W	RAD23	P32628	398 aa	Known RBP	5.12	□□□□□ -1.59
CDC1	YDR182W	PTC7	P38797	343 aa		5.12	□□□□□ -1.59
CDC1	YDR182W	PCL7	P40186	285 aa		5.12	□□□□□ -1.59
CDC1	YDR182W	YFL054C	P43549	646 aa		5.12	□□□□□ -1.59
CDC1	YDR182W	YJR011C	P47086	261 aa	Predicted RBP	5.12	□□□□□ -1.59
CDC1	YDR182W	TMA20	P89886	181 aa	Predicted RBP	5.12	□□□□□ -1.59
CDC1	YDR182W	GRX3	Q03835	250 aa		5.12	□□□□□ -1.59
CDC1	YDR182W	DPB4	Q04603	196 aa	Known RBP	5.12	□□□□□ -1.59
CDC1	YDR182W	MCH1	Q07376	486 aa		5.12	□□□□□ -1.59
CDC1	YDR182W	AAC1	P04710	309 aa		5.11	□□□□□ -1.59
CDC1	YDR182W	OLE1	P21147	510 aa	Known RBP	5.11	□□□□□ -1.59
CDC1	YDR182W	RNA14	P25298	677 aa	Known RBP	5.11	□□□□□ -1.59
CDC1	YDR182W	INO2	P26798	304 aa		5.11	□□□□□ -1.59
CDC1	YDR182W	RNP1	P32385	249 aa		5.11	□□□□□ -1.59
CDC1	YDR182W	UTP30	P36144	274 aa	Known RBP	5.11	□□□□□ -1.59
CDC1	YDR182W	HTD2	P38790	280 aa	Known RBP	5.11	□□□□□ -1.59
CDC1	YDR182W	NOP16	P40007	231 aa	Known RBP	5.11	□□□□□ -1.59
CDC1	YDR182W	RTT105	P40063	208 aa		5.11	□□□□□ -1.59
CDC1	YDR182W	BNA6	P43619	295 aa		5.11	□□□□□ -1.59
CDC1	YDR182W	YJL118W	P47022	219 aa		5.11	□□□□□ -1.59
CDC1	YDR182W	RPL9B	P51401	191 aa	Known RBP	5.11	□□□□□ -1.59
CDC1	YDR182W	TDA1	Q03533	586 aa		5.11	□□□□□ -1.59
CDC1	YDR182W	YDR179W-A	Q03983	463 aa		5.11	□□□□□ -1.59
CDC1	YDR182W	YMR130W	Q04223	302 aa		5.11	□□□□□ -1.59
CDC1	YDR182W	MGR3	Q04472	501 aa		5.11	□□□□□ -1.59
CDC1	YDR182W	YDL086W	Q07505	273 aa		5.11	□□□□□ -1.59
CDC1	YDR182W	DGK1	Q12382	290 aa		5.11	□□□□□ -1.59
CDC1	YDR182W	NKP1	Q12493	238 aa		5.11	□□□□□ -1.59
CDC1	YDR182W	CHO1	P08456	276 aa		5.1	□□□□□ -1.59
CDC1	YDR182W	LSB5	P25369	354 aa		5.1	□□□□□ -1.59
CDC1	YDR182W	HOM6	P31116	359 aa	Known RBP	5.1	□□□□□ -1.59
CDC1	YDR182W	GPX2	P38143	162 aa		5.1	□□□□□ -1.59
CDC1	YDR182W	IKI1	P38874	309 aa		5.1	□□□□□ -1.59
CDC1	YDR182W	VPS55	P47111	140 aa		5.1	□□□□□ -1.59
CDC1	YDR182W	DIE2	P50076	525 aa		5.1	□□□□□ -1.59
CDC1	YDR182W	RCF1	Q03713	159 aa		5.1	□□□□□ -1.59
CDC1	YDR182W	LPP1	Q04396	274 aa		5.1	□□□□□ -1.59
CDC1	YDR182W	YDR286C	Q05530	114 aa		5.1	□□□□□ -1.59
CDC1	YDR182W	PEX27	Q08580	376 aa		5.1	□□□□□ -1.59
CDC1	YDR182W	MRPL23	Q12487	163 aa	Predicted RBP	5.1	□□□□□ -1.59
CDC1	YDR182W	URA3	P03962	267 aa		5.09	□□□□□ -1.59
CDC1	YDR182W	SEN2	P16658	377 aa		5.09	□□□□□ -1.59
CDC1	YDR182W	FUS3	P16892	353 aa	Known RBP	5.09	□□□□□ -1.59
CDC1	YDR182W	IFM1	P25038	676 aa		5.09	□□□□□ -1.59
CDC1	YDR182W	ELO2	P25358	347 aa		5.09	□□□□□ -1.59
CDC1	YDR182W	FLO10	P36170	1169 aa		5.09	□□□□□ -1.59
CDC1	YDR182W	PRS4	P38063	326 aa	Predicted RBP	5.09	□□□□□ -1.59
CDC1	YDR182W	YHK8	P38776	514 aa		5.09	□□□□□ -1.59
CDC1	YDR182W	CAT5	P41735	233 aa		5.09	□□□□□ -1.59
CDC1	YDR182W	RBL2	P48606	106 aa	Known RBP	5.09	□□□□□ -1.59
CDC1	YDR182W	ALG9	P53868	555 aa	Known RBP	5.09	□□□□□ -1.59
CDC1	YDR182W	HOR7	Q05827	59 aa		5.09	□□□□□ -1.59
CDC1	YDR182W	YOR292C	Q08743	309 aa		5.09	□□□□□ -1.59
CDC1	YDR182W	SUS1	Q6WNK7	96 aa		5.09	□□□□□ -1.59
CDC1	YDR182W	YLR365W	Q7LIF2	110 aa		5.09	□□□□□ -1.59
CDC1	YDR182W	RPL3	P14126	387 aa	Known RBP	5.08	□□□□□ -1.6
CDC1	YDR182W	MRS4	P23500	304 aa		5.08	□□□□□ -1.6
CDC1	YDR182W	MRP20	P32387	263 aa		5.08	□□□□□ -1.6
CDC1	YDR182W	MED8	P38304	223 aa		5.08	□□□□□ -1.6
CDC1	YDR182W	PHM8	P40025	321 aa		5.08	□□□□□ -1.6
CDC1	YDR182W	ERV29	P53337	310 aa		5.08	□□□□□ -1.6
CDC1	YDR182W	CPR8	P53728	308 aa		5.08	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms