RNA–Protein interactions for RNA: YDR008C

YDR008C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR008C, Length 351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR008CYDR008C IRC22P40006 225 aa0.84□□□□□ -2.27
YDR008CYDR008C MIC26P50087 233 aa0.84□□□□□ -2.27
YDR008CYDR008C BRR6P53062 197 aa0.84□□□□□ -2.27
YDR008CYDR008C ALG13P53178 202 aa0.84□□□□□ -2.27
YDR008CYDR008C DID2P69771 204 aa0.84□□□□□ -2.27
YDR008CYDR008C TRM12Q04235 462 aa0.84□□□□□ -2.27
YDR008CYDR008C SPG3Q04398 127 aaPredicted RBP0.84□□□□□ -2.27
YDR008CYDR008C TSC3Q3E790 80 aa0.84□□□□□ -2.27
YDR008CYDR008C YPL229WQ99395 206 aa0.84□□□□□ -2.27
YDR008CYDR008C CYR1P08678 2026 aaKnown RBP0.84□□□□□ -2.28
YDR008CYDR008C YHR139C-AO13536 103 aa0.83□□□□□ -2.28
YDR008CYDR008C REP2P03872 296 aa0.83□□□□□ -2.28
YDR008CYDR008C YBR121C-AP0C5L4 52 aa0.83□□□□□ -2.28
YDR008CYDR008C GPA2P10823 449 aa0.83□□□□□ -2.28
YDR008CYDR008C DBF2P22204 572 aa0.83□□□□□ -2.28
YDR008CYDR008C PTM1P32857 523 aa0.83□□□□□ -2.28
YDR008CYDR008C APS1P35181 156 aa0.83□□□□□ -2.28
YDR008CYDR008C GLE2P40066 365 aa0.83□□□□□ -2.28
YDR008CYDR008C RTR1P40084 226 aaPredicted RBP0.83□□□□□ -2.28
YDR008CYDR008C RPL13BP40212 199 aaKnown RBP0.83□□□□□ -2.28
YDR008CYDR008C FAR7P43592 221 aa0.83□□□□□ -2.28
YDR008CYDR008C NUP57P48837 541 aa0.83□□□□□ -2.28
YDR008CYDR008C BOL2P53082 120 aa0.83□□□□□ -2.28
YDR008CYDR008C NUP49Q02199 472 aa0.83□□□□□ -2.28
YDR008CYDR008C MZM1Q03429 123 aaPredicted RBP0.83□□□□□ -2.28
YDR008CYDR008C YPL162CQ12042 273 aa0.83□□□□□ -2.28
YDR008CYDR008C RPL13AQ12690 199 aaPredicted RBP0.83□□□□□ -2.28
YDR008CYDR008C TIM9O74700 87 aa0.82□□□□□ -2.28
YDR008CYDR008C STE18P18852 110 aa0.82□□□□□ -2.28
YDR008CYDR008C TMA19P35691 167 aaKnown RBP0.82□□□□□ -2.28
YDR008CYDR008C UMP1P38293 148 aa0.82□□□□□ -2.28
YDR008CYDR008C YBR220CP38318 560 aa0.82□□□□□ -2.28
YDR008CYDR008C GAA1P39012 614 aa0.82□□□□□ -2.28
YDR008CYDR008C YRB2P40517 327 aa0.82□□□□□ -2.28
YDR008CYDR008C ERJ5P43613 295 aaPredicted RBP0.82□□□□□ -2.28
YDR008CYDR008C YNR077CP53758 84 aa0.82□□□□□ -2.28
YDR008CYDR008C SWP1Q02795 286 aa0.82□□□□□ -2.28
YDR008CYDR008C YLR162WQ06235 118 aa0.82□□□□□ -2.28
YDR008CYDR008C JLP1Q12358 412 aa0.82□□□□□ -2.28
YDR008CYDR008C RPL2AP0CX45 254 aaKnown RBP0.81□□□□□ -2.28
YDR008CYDR008C RPL2BP0CX46 254 aaKnown RBP0.81□□□□□ -2.28
YDR008CYDR008C GCN3P14741 305 aa0.81□□□□□ -2.28
YDR008CYDR008C COQ1P18900 473 aa0.81□□□□□ -2.28
YDR008CYDR008C BET1P22804 142 aa0.81□□□□□ -2.28
YDR008CYDR008C TFC1P32367 649 aa0.81□□□□□ -2.28
YDR008CYDR008C MGM101P32787 269 aaKnown RBP0.81□□□□□ -2.28
YDR008CYDR008C SRY1P36007 326 aa0.81□□□□□ -2.28
YDR008CYDR008C MRPL17P36528 281 aa0.81□□□□□ -2.28
YDR008CYDR008C YBR209WP38311 105 aa0.81□□□□□ -2.28
YDR008CYDR008C GVP36P40531 326 aaKnown RBP0.81□□□□□ -2.28
YDR008CYDR008C YRB1P41920 201 aaKnown RBP0.81□□□□□ -2.28
YDR008CYDR008C ADO1P47143 340 aaKnown RBP0.81□□□□□ -2.28
YDR008CYDR008C ANT1Q06497 328 aa0.81□□□□□ -2.28
YDR008CYDR008C MDM32Q12171 622 aa0.81□□□□□ -2.28
YDR008CYDR008C YDL180WQ12301 547 aa0.81□□□□□ -2.28
YDR008CYDR008C YIL177CP40434 1758 aa0.8□□□□□ -2.28
YDR008CYDR008C YJL225CP40889 1758 aa0.8□□□□□ -2.28
YDR008CYDR008C RPL25P04456 142 aaKnown RBP0.8□□□□□ -2.28
YDR008CYDR008C URA5P13298 226 aaKnown RBP0.8□□□□□ -2.28
YDR008CYDR008C KSS1P14681 368 aa0.8□□□□□ -2.28
YDR008CYDR008C CKS1P20486 150 aaKnown RBP0.8□□□□□ -2.28
YDR008CYDR008C PBN1P25580 416 aa0.8□□□□□ -2.28
YDR008CYDR008C IDH1P28834 360 aaKnown RBP RIP-Chip data0.8□□□□□ -2.28not detected
YDR008CYDR008C CBT1P36038 271 aaPredicted RBP0.8□□□□□ -2.28
YDR008CYDR008C TVP38P36164 337 aa0.8□□□□□ -2.28
YDR008CYDR008C TRM5P38793 499 aa0.8□□□□□ -2.28
YDR008CYDR008C DOC1P53068 250 aa0.8□□□□□ -2.28
YDR008CYDR008C RIO1Q12196 484 aaKnown RBP0.8□□□□□ -2.28
YDR008CYDR008C RUD3Q12234 484 aaKnown RBP0.8□□□□□ -2.28
YDR008CYDR008C YHR214C-EQ8TGK0 99 aa0.8□□□□□ -2.28
YDR008CYDR008C SEY1Q99287 776 aa0.8□□□□□ -2.28
YDR008CYDR008C ACC1Q00955 2233 aaKnown RBP0.8□□□□□ -2.28
YDR008CYDR008C PRP18P33411 251 aaPredicted RBP0.79□□□□□ -2.28
YDR008CYDR008C YBR285WP38354 144 aa0.79□□□□□ -2.28
YDR008CYDR008C ERG28P40030 148 aa0.79□□□□□ -2.28
YDR008CYDR008C YNL194CP40169 301 aa0.79□□□□□ -2.28
YDR008CYDR008C OTU1P43558 301 aa0.79□□□□□ -2.28
YDR008CYDR008C IRC18P47056 224 aa0.79□□□□□ -2.28
YDR008CYDR008C RAD17P48581 401 aa0.79□□□□□ -2.28
YDR008CYDR008C YDR274CP87283 123 aa0.79□□□□□ -2.28
YDR008CYDR008C GPM2Q12008 311 aa0.79□□□□□ -2.28
YDR008CYDR008C PDR18P53756 1333 aa0.79□□□□□ -2.28
YDR008CYDR008C TVP23P38962 199 aa0.78□□□□□ -2.28
YDR008CYDR008C PDR17P53844 350 aa0.78□□□□□ -2.28
YDR008CYDR008C BNA7Q04066 261 aa0.78□□□□□ -2.28
YDR008CYDR008C CUE4Q04201 117 aaPredicted RBP0.78□□□□□ -2.28
YDR008CYDR008C FSF1Q12029 327 aaKnown RBP0.78□□□□□ -2.28
YDR008CYDR008C MCP1Q12106 302 aa0.78□□□□□ -2.28
YDR008CYDR008C YKL183C-AQ3E765 70 aa0.78□□□□□ -2.28
YDR008CYDR008C NCB2Q92317 146 aa0.78□□□□□ -2.28
YDR008CYDR008C CPA1P07258 411 aaKnown RBP0.77□□□□□ -2.29
YDR008CYDR008C PRX1P34227 261 aaKnown RBP0.77□□□□□ -2.29
YDR008CYDR008C UPS2P35200 230 aa0.77□□□□□ -2.29
YDR008CYDR008C UTP30P36144 274 aaKnown RBP0.77□□□□□ -2.29
YDR008CYDR008C ECM4P36156 370 aa0.77□□□□□ -2.29
YDR008CYDR008C RTC3P38804 111 aaPredicted RBP0.77□□□□□ -2.29
YDR008CYDR008C MSS2P40990 351 aa0.77□□□□□ -2.29
YDR008CYDR008C MGA1P53050 456 aa0.77□□□□□ -2.29
YDR008CYDR008C YHR007C-AQ07074 71 aa0.77□□□□□ -2.29
YDR008CYDR008C RAD28Q12021 506 aa0.77□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms