RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	UMP1	P38293	148 aa		0.21	□□□□□ -2.38
HMRA2	YCR096C	POP4	P38336	279 aa		0.21	□□□□□ -2.38
HMRA2	YCR096C	SOK1	P40317	901 aa		0.21	□□□□□ -2.38
HMRA2	YCR096C	SAY1	P53324	424 aa		0.21	□□□□□ -2.38
HMRA2	YCR096C	SWP1	Q02795	286 aa		0.21	□□□□□ -2.38
HMRA2	YCR096C	YMD8	Q03697	442 aa		0.21	□□□□□ -2.38
HMRA2	YCR096C	AIM36	Q03798	255 aa		0.21	□□□□□ -2.38
HMRA2	YCR096C	RPO26	P20435	155 aa		0.2	□□□□□ -2.38
HMRA2	YCR096C	UTP30	P36144	274 aa	Known RBP	0.2	□□□□□ -2.38
HMRA2	YCR096C	LDB7	P38210	180 aa		0.2	□□□□□ -2.38
HMRA2	YCR096C	YFL065C	P43539	102 aa		0.2	□□□□□ -2.38
HMRA2	YCR096C	MCM22	P47167	239 aa		0.2	□□□□□ -2.38
HMRA2	YCR096C	NSA1	P53136	463 aa	Predicted RBP	0.2	□□□□□ -2.38
HMRA2	YCR096C	YDR248C	Q03786	193 aa		0.2	□□□□□ -2.38
HMRA2	YCR096C	PAM18	Q07914	168 aa		0.2	□□□□□ -2.38
HMRA2	YCR096C	YOL160W	Q08321	113 aa		0.2	□□□□□ -2.38
HMRA2	YCR096C	FSF1	Q12029	327 aa	Known RBP	0.2	□□□□□ -2.38
HMRA2	YCR096C	MCP1	Q12106	302 aa		0.2	□□□□□ -2.38
HMRA2	YCR096C	YDL180W	Q12301	547 aa		0.2	□□□□□ -2.38
HMRA2	YCR096C	TDA8	Q6B2U8	126 aa		0.2	□□□□□ -2.38
HMRA2	YCR096C	INO80	P53115	1489 aa		0.19	□□□□□ -2.38
HMRA2	YCR096C	YLR236C	A0A023PZG4	107 aa		0.19	□□□□□ -2.38
HMRA2	YCR096C	BCY1	P07278	416 aa	Known RBP	0.19	□□□□□ -2.38
HMRA2	YCR096C	MATALPHA1	P0CY06	175 aa		0.19	□□□□□ -2.38
HMRA2	YCR096C	HMLALPHA1	P0CY07	175 aa		0.19	□□□□□ -2.38
HMRA2	YCR096C	TFC1	P32367	649 aa		0.19	□□□□□ -2.38
HMRA2	YCR096C	SEC17	P32602	292 aa		0.19	□□□□□ -2.38
HMRA2	YCR096C	GVP36	P40531	326 aa	Known RBP	0.19	□□□□□ -2.38
HMRA2	YCR096C	YAE1	P47118	141 aa	Predicted RBP	0.19	□□□□□ -2.38
HMRA2	YCR096C	CUS2	P53830	285 aa	Predicted RBP	0.19	□□□□□ -2.38
HMRA2	YCR096C	CDC28	P00546	298 aa	Known RBP	0.18	□□□□□ -2.38
HMRA2	YCR096C	DBF2	P22204	572 aa		0.18	□□□□□ -2.38
HMRA2	YCR096C	YCL042W	P25572	119 aa		0.18	□□□□□ -2.38
HMRA2	YCR096C	MRPL28	P36527	147 aa		0.18	□□□□□ -2.38
HMRA2	YCR096C	PRE6	P40303	254 aa	Known RBP	0.18	□□□□□ -2.38
HMRA2	YCR096C	FLX1	P40464	311 aa		0.18	□□□□□ -2.38
HMRA2	YCR096C	ALG13	P53178	202 aa		0.18	□□□□□ -2.38
HMRA2	YCR096C	YNL247W	P53852	767 aa	Known RBP	0.18	□□□□□ -2.38
HMRA2	YCR096C	DID2	P69771	204 aa		0.18	□□□□□ -2.38
HMRA2	YCR096C	YLR173W	Q06247	608 aa		0.18	□□□□□ -2.38
HMRA2	YCR096C	TSC3	Q3E790	80 aa		0.18	□□□□□ -2.38
HMRA2	YCR096C	ATG40	Q99325	256 aa		0.18	□□□□□ -2.38
HMRA2	YCR096C	CFT1	Q06632	1357 aa	Known RBP	0.18	□□□□□ -2.38
HMRA2	YCR096C	SEC11	P15367	167 aa		0.17	□□□□□ -2.38
HMRA2	YCR096C	URA6	P15700	204 aa		0.17	□□□□□ -2.38
HMRA2	YCR096C	MRPL25	P23369	157 aa		0.17	□□□□□ -2.38
HMRA2	YCR096C	TCA17	P32613	152 aa		0.17	□□□□□ -2.38
HMRA2	YCR096C	SNC2	P33328	115 aa		0.17	□□□□□ -2.38
HMRA2	YCR096C	OPY1	P38271	328 aa		0.17	□□□□□ -2.38
HMRA2	YCR096C	YBR209W	P38311	105 aa		0.17	□□□□□ -2.38
HMRA2	YCR096C	CUE1	P38428	203 aa		0.17	□□□□□ -2.38
HMRA2	YCR096C	YEL008W	P40001	126 aa		0.17	□□□□□ -2.38
HMRA2	YCR096C	LIA1	P47120	325 aa	Known RBP	0.17	□□□□□ -2.38
HMRA2	YCR096C	ARO8	P53090	500 aa	Known RBP	0.17	□□□□□ -2.38
HMRA2	YCR096C	YDR274C	P87283	123 aa		0.17	□□□□□ -2.38
HMRA2	YCR096C	YMR007W	Q03675	126 aa		0.17	□□□□□ -2.38
HMRA2	YCR096C	GPM2	Q12008	311 aa		0.17	□□□□□ -2.38
HMRA2	YCR096C	RAD28	Q12021	506 aa		0.17	□□□□□ -2.38
HMRA2	YCR096C	YHR214C-E	Q8TGK0	99 aa		0.17	□□□□□ -2.38
HMRA2	YCR096C	SPT3	P06844	337 aa		0.16	□□□□□ -2.38
HMRA2	YCR096C	MGM101	P32787	269 aa	Known RBP	0.16	□□□□□ -2.38
HMRA2	YCR096C	YUH1	P35127	236 aa		0.16	□□□□□ -2.38
HMRA2	YCR096C	SIP3	P38717	1229 aa		0.16	□□□□□ -2.38
HMRA2	YCR096C	MPC3	P53311	146 aa		0.16	□□□□□ -2.38
HMRA2	YCR096C	DIG2	Q03373	323 aa	Known RBP	0.16	□□□□□ -2.38
HMRA2	YCR096C	KRE28	Q04431	385 aa		0.16	□□□□□ -2.38
HMRA2	YCR096C	YMR252C	Q04814	134 aa		0.16	□□□□□ -2.38
HMRA2	YCR096C	YRA1	Q12159	226 aa	Known RBP	0.16	□□□□□ -2.38
HMRA2	YCR096C	LSO2	Q3E772	92 aa	Known RBP	0.16	□□□□□ -2.38
HMRA2	YCR096C	YFR032C-B	Q8TGU2	87 aa		0.16	□□□□□ -2.38
HMRA2	YCR096C	PRP8	P33334	2413 aa	Known RBP	0.16	□□□□□ -2.38
HMRA2	YCR096C	RPL27A	P0C2H6	136 aa	Known RBP	0.15	□□□□□ -2.39
HMRA2	YCR096C	ATP15	P21306	62 aa		0.15	□□□□□ -2.39
HMRA2	YCR096C	YBR285W	P38354	144 aa		0.15	□□□□□ -2.39
HMRA2	YCR096C	YHL042W	P38729	150 aa		0.15	□□□□□ -2.39
HMRA2	YCR096C	YPL073C	P40323	161 aa		0.15	□□□□□ -2.39
HMRA2	YCR096C	PRM8	P53174	237 aa		0.15	□□□□□ -2.39
HMRA2	YCR096C	MRPL50	P53724	139 aa		0.15	□□□□□ -2.39
HMRA2	YCR096C	PET191	Q02772	108 aa		0.15	□□□□□ -2.39
HMRA2	YCR096C	RCE1	Q03530	315 aa		0.15	□□□□□ -2.39
HMRA2	YCR096C	RHO1	P06780	209 aa	Known RBP	0.14	□□□□□ -2.39
HMRA2	YCR096C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.14	□□□□□ -2.39	not detected
HMRA2	YCR096C	APS1	P35181	156 aa		0.14	□□□□□ -2.39
HMRA2	YCR096C	SKG1	P36169	355 aa		0.14	□□□□□ -2.39
HMRA2	YCR096C	AST2	P39945	430 aa	Known RBP	0.14	□□□□□ -2.39
HMRA2	YCR096C	EDC3	P39998	551 aa	Known RBP	0.14	□□□□□ -2.39
HMRA2	YCR096C	HYR1	P40581	163 aa	Known RBP	0.14	□□□□□ -2.39
HMRA2	YCR096C	YFH7	P43591	353 aa		0.14	□□□□□ -2.39
HMRA2	YCR096C	RPC17	P47076	161 aa		0.14	□□□□□ -2.39
HMRA2	YCR096C	BXI1	P48558	297 aa		0.14	□□□□□ -2.39
HMRA2	YCR096C	NUP84	P52891	726 aa		0.14	□□□□□ -2.39
HMRA2	YCR096C	CWC27	Q02770	301 aa		0.14	□□□□□ -2.39
HMRA2	YCR096C	PET117	Q02771	107 aa		0.14	□□□□□ -2.39
HMRA2	YCR096C	SRL4	Q03085	281 aa		0.14	□□□□□ -2.39
HMRA2	YCR096C	YDR249C	Q03787	373 aa		0.14	□□□□□ -2.39
HMRA2	YCR096C	CUE4	Q04201	117 aa	Predicted RBP	0.14	□□□□□ -2.39
HMRA2	YCR096C	CDC123	Q05791	360 aa		0.14	□□□□□ -2.39
HMRA2	YCR096C	PTM1	P32857	523 aa		0.13	□□□□□ -2.39
HMRA2	YCR096C	MSN4	P33749	630 aa		0.13	□□□□□ -2.39
HMRA2	YCR096C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.13	□□□□□ -2.39	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 96.5 ms