RNA–Protein interactions for RNA: YBR006W

UGA2, Transcript of Succinate semialdehyde dehydrogenase, yeast

Gene UGA2, Length 1,494 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UGA2	YBR006W	ECM27	P47144	725 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	GLO1	P50107	326 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	YDR248C	Q03786	193 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	DPB4	Q04603	196 aa	Known RBP	4.18	□□□□□ -1.74
UGA2	YBR006W	YPR098C	Q06089	161 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	YNG1	Q08465	219 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	YOR186W	Q08560	144 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	RRS1	Q08746	203 aa	Known RBP	4.18	□□□□□ -1.74
UGA2	YBR006W	USV1	Q12132	391 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	POM34	Q12445	299 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	IPP1	P00817	287 aa	Known RBP	4.18	□□□□□ -1.74
UGA2	YBR006W	REP2	P03872	296 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	SPS4	P09937	338 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	YLL053C	P0CD98	152 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	MSI1	P13712	422 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	MAK32	P23060	363 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	FEN2	P25621	512 aa	Known RBP	4.18	□□□□□ -1.74
UGA2	YBR006W	SUA5	P32579	426 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	GLC7	P32598	312 aa	Known RBP	4.18	□□□□□ -1.74
UGA2	YBR006W	ARO9	P38840	513 aa	Predicted RBP	4.18	□□□□□ -1.74
UGA2	YBR006W	GPI16	P38875	610 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
UGA2	YBR006W	PHM8	P40025	321 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	YER079W	P40052	210 aa	Known RBP	4.18	□□□□□ -1.74
UGA2	YBR006W	YJR011C	P47086	261 aa	Predicted RBP	4.18	□□□□□ -1.74
UGA2	YBR006W	NIF3	P53081	288 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	ALG9	P53868	555 aa	Known RBP	4.18	□□□□□ -1.74
UGA2	YBR006W	CAB5	Q03941	241 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	PIN3	Q06449	215 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	SCP1	Q08873	200 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	PRS5	Q12265	496 aa	Known RBP	4.18	□□□□□ -1.74
UGA2	YBR006W	PRM4	Q12498	284 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	UBA3	Q99344	299 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	MEC1	P38111	2368 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	RPL25	P04456	142 aa	Known RBP	4.17	□□□□□ -1.74
UGA2	YBR006W	RPI1	P23250	407 aa	Known RBP	4.17	□□□□□ -1.74
UGA2	YBR006W	YCR101C	P25607	182 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	OCH1	P31755	480 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	NAT2	P37293	288 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	CDS1	P38221	457 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	YPC1	P38298	316 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	YHL037C	P38733	133 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	GEP4	P38812	185 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	PIG2	P40187	538 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	SYG1	P40528	902 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	EGT2	P42835	1041 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	YFL051C	P43552	160 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	MRX5	P47007	382 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	UBP8	P50102	471 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	TIM11	P81449	96 aa	Predicted RBP	4.17	□□□□□ -1.74
UGA2	YBR006W	YPL077C	Q02831	240 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	YDC1	Q02896	317 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	ORM2	Q06144	216 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	FEX2	Q08991	375 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	RNH203	Q12338	110 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	MED4	Q12343	284 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	MPD1	Q12404	318 aa	Known RBP	4.17	□□□□□ -1.74
UGA2	YBR006W	EAF3	Q12432	401 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	ERG27	Q12452	347 aa	Known RBP	4.17	□□□□□ -1.74
UGA2	YBR006W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.17	□□□□□ -1.74
UGA2	YBR006W	YBR298C-A	Q8TGK4	73 aa		4.17	□□□□□ -1.74
UGA2	YBR006W	TPI1	P00942	248 aa	Known RBP	4.16	□□□□□ -1.74
UGA2	YBR006W	SEN2	P16658	377 aa		4.16	□□□□□ -1.74
UGA2	YBR006W	MIR1	P23641	311 aa	Known RBP	4.16	□□□□□ -1.74
UGA2	YBR006W	YCR061W	P25639	631 aa		4.16	□□□□□ -1.74
UGA2	YBR006W	ERV1	P27882	189 aa		4.16	□□□□□ -1.74
UGA2	YBR006W	PRS2	P38620	318 aa	Known RBP	4.16	□□□□□ -1.74
UGA2	YBR006W	COS8	P38723	381 aa		4.16	□□□□□ -1.74
UGA2	YBR006W	CCS1	P40202	249 aa	Known RBP	4.16	□□□□□ -1.74
UGA2	YBR006W	SWM2	P40342	146 aa		4.16	□□□□□ -1.74
UGA2	YBR006W	YDL183C	P48569	320 aa		4.16	□□□□□ -1.74
UGA2	YBR006W	UBC13	P52490	153 aa		4.16	□□□□□ -1.74
UGA2	YBR006W	YPL108W	Q02872	168 aa	Predicted RBP	4.16	□□□□□ -1.74
UGA2	YBR006W	PRM15	Q03262	622 aa		4.16	□□□□□ -1.74
UGA2	YBR006W	RTT103	Q05543	409 aa		4.16	□□□□□ -1.74
UGA2	YBR006W	VAM3	Q12241	283 aa		4.16	□□□□□ -1.74
UGA2	YBR006W	RTR2	Q12378	196 aa		4.16	□□□□□ -1.74
UGA2	YBR006W	YGL194C-A	Q2V2P6	80 aa		4.16	□□□□□ -1.74
UGA2	YBR006W	RPS23A	P0CX29	145 aa	Known RBP	4.15	□□□□□ -1.75
UGA2	YBR006W	RPS23B	P0CX30	145 aa		4.15	□□□□□ -1.75
UGA2	YBR006W	IMP1	P28627	190 aa		4.15	□□□□□ -1.75
UGA2	YBR006W	YBR220C	P38318	560 aa		4.15	□□□□□ -1.75
UGA2	YBR006W	LAG1	P38703	411 aa		4.15	□□□□□ -1.75
UGA2	YBR006W	LNP1	P38878	278 aa		4.15	□□□□□ -1.75
UGA2	YBR006W	SNX4	P47057	423 aa		4.15	□□□□□ -1.75
UGA2	YBR006W	SOL1	P50278	321 aa		4.15	□□□□□ -1.75
UGA2	YBR006W	JAC1	P53193	184 aa		4.15	□□□□□ -1.75
UGA2	YBR006W	INN1	P53901	409 aa		4.15	□□□□□ -1.75
UGA2	YBR006W	THI74	Q04083	370 aa		4.15	□□□□□ -1.75
UGA2	YBR006W	YMR254C	Q04838	102 aa		4.15	□□□□□ -1.75
UGA2	YBR006W	FEX1	Q08913	375 aa		4.15	□□□□□ -1.75
UGA2	YBR006W	YLR365W	Q7LIF2	110 aa		4.15	□□□□□ -1.75
UGA2	YBR006W	QCR2	P07257	368 aa		4.14	□□□□□ -1.75
UGA2	YBR006W	MAG1	P22134	296 aa	Known RBP	4.14	□□□□□ -1.75
UGA2	YBR006W	SEC22	P22214	214 aa		4.14	□□□□□ -1.75
UGA2	YBR006W	RPB7	P34087	171 aa		4.14	□□□□□ -1.75
UGA2	YBR006W	SWD2	P36104	329 aa	Predicted RBP	4.14	□□□□□ -1.75
UGA2	YBR006W	SWD3	P38123	315 aa		4.14	□□□□□ -1.75
UGA2	YBR006W	VMA7	P39111	118 aa		4.14	□□□□□ -1.75
UGA2	YBR006W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 88 ms