RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 TAAR1Q96RJ0 339 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 ANKEF1Q9NU02 776 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 CTNNAL1Q9UBT7 734 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 PLIN4Q96Q06 1357 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 NFIBO00712 420 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 MED7O43513 233 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 KIF1CO43896 1103 aaKnown RBP10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 KRT10P13645 584 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 VCAM1P19320 739 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 ARFIP2P53365 341 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 BAATQ14032 418 aaPredicted RBP10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 AGGF1Q8N302 714 aaeCLIP10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 TMEM143Q96AN5 459 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 IDI2Q9BXS1 227 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 OSBPL7Q9BZF2 842 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 TMEM39BQ9GZU3 492 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 SLC9A2Q9UBY0 812 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 NAALADL1Q9UQQ1 740 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 ZBTB12Q9Y330 459 aaPredicted RBP10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 L3MBTL1Q9Y468 752 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 ZC3H4Q9UPT8 1303 aaKnown RBP10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 ADAMTSL3P82987 1691 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 COPEO14579 308 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 VIL1P09327 827 aaKnown RBP10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 SKIP12755 728 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 RPS6P62753 249 aaKnown RBP10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 NFX1Q12986 1120 aaKnown RBP10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 SPP2Q13103 211 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 CLEC16AQ2KHT3 1053 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 ZNF677Q86XU0 584 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 TRIM42Q8IWZ5 723 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 RIBC1Q8N443 379 aaPredicted RBP10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 ACSF2Q96CM8 615 aaPredicted RBP10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 KLF6Q99612 283 aaPredicted RBP10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 YIPF3Q9GZM5 350 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 SPATS2LQ9NUQ6 558 aaKnown RBP10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 PSMC3IPQ9P2W1 217 aaPredicted RBP10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 SLC12A6Q9UHW9 1150 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 COG5Q9UP83 839 aa10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 SCAF8Q9UPN6 1271 aaKnown RBP10.66□□□□□ -0.7
SEMA6A-201ENST00000257414 POLRMTO00411 1230 aaKnown RBP10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 STK10O94804 968 aaKnown RBP10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 MMP13P45452 471 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 CDO1Q16878 200 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 ZNF699Q32M78 642 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 CCDC14Q49A88 953 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 CRY2Q49AN0 593 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 CAPRIN2Q6IMN6 1127 aaKnown RBP10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 EEPD1Q7L9B9 569 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 LONP2Q86WA8 852 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 MAGEB18Q96M61 343 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 LBHD1Q9BQE6 289 aaPredicted RBP10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 JPH1Q9HDC5 661 aaPredicted RBP10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 STOML1Q9UBI4 398 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 PPARGC1AQ9UBK2 798 aaKnown RBP10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 TMEM59LQ9UK28 342 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 SNX3O60493 162 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 LPXNO60711 386 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 PROSCO94903 275 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 STAMBPO95630 424 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 ICAM1P05362 532 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 TARSP26639 723 aaKnown RBP10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 PSMC1P62191 440 aaKnown RBP10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 NOP14P78316 857 aaKnown RBP10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 RRP1BQ14684 758 aaKnown RBP10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 PREPLQ4J6C6 727 aaPredicted RBP10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 OR6B2Q6IFH4 312 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 FEZF2Q8TBJ5 459 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 ATXN2LQ8WWM7 1075 aaKnown RBP10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 FAF2Q96CS3 445 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 PAGR1Q9BTK6 254 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 DCLK3Q9C098 648 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 UBN1Q9NPG3 1134 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 DDX56Q9NY93 547 aaKnown RBP10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 NINJ2Q9NZG7 142 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 O00370 1275 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 DNM1LO00429 736 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 CALCAP01258 141 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 KRT7P08729 469 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 SOX10P56693 466 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 IRX4P78413 519 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 TMPRSS15P98073 1019 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 NCOA4Q13772 614 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 LVRNQ6Q4G3 990 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 SDCCAG8Q86SQ7 713 aaPredicted RBP10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 SLC9A9Q8IVB4 645 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 PPM1NQ8N819 430 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 SMC1BQ8NDV3 1235 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 PPP4R1Q8TF05 950 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 MOV10L1Q9BXT6 1211 aaKnown RBP10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 BATF3Q9NR55 127 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 LRRC4BQ9NT99 713 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 STRIP2Q9ULQ0 834 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 PHTF1Q9UMS5 762 aa10.65□□□□□ -0.7
SEMA6A-201ENST00000257414 WDR46O15213 610 aaKnown RBP10.64□□□□□ -0.71
SEMA6A-201ENST00000257414 KRT37O76014 449 aa10.64□□□□□ -0.71
SEMA6A-201ENST00000257414 ZBED1O96006 694 aa10.64□□□□□ -0.71
SEMA6A-201ENST00000257414 LMNAP02545 664 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms