RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 NISCHQ9Y2I1 1504 aa18.96■□□□□ 0.63
SEMA6A-201ENST00000257414 SHROOM4Q9ULL8 1493 aa17.2■□□□□ 0.34
SEMA6A-201ENST00000257414 DCAF8L2P0C7V8 631 aa17.2■□□□□ 0.34
SEMA6A-201ENST00000257414 SUPT5HO00267 1087 aaKnown RBP17.18■□□□□ 0.34
SEMA6A-201ENST00000257414 PCGF6Q9BYE7 350 aa16.35■□□□□ 0.21
SEMA6A-201ENST00000257414 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
SEMA6A-201ENST00000257414 EHMT2Q96KQ7 1210 aa16.11■□□□□ 0.17
SEMA6A-201ENST00000257414 HRCP23327 699 aa16.09■□□□□ 0.17
SEMA6A-201ENST00000257414 FAM9AQ8IZU1 332 aaPredicted RBP16.01■□□□□ 0.15
SEMA6A-201ENST00000257414 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
SEMA6A-201ENST00000257414 LOC105371045A0A1W2PR82 267 aa15.92■□□□□ 0.14
SEMA6A-201ENST00000257414 TRIM41Q8WV44 630 aa15.91■□□□□ 0.14
SEMA6A-201ENST00000257414 PPARGC1BQ86YN6 1023 aaKnown RBP15.81■□□□□ 0.12
SEMA6A-201ENST00000257414 TRIM26Q12899 539 aaPredicted RBP15.8■□□□□ 0.12
SEMA6A-201ENST00000257414 ZEB1P37275 1124 aaPredicted RBP15.77■□□□□ 0.11
SEMA6A-201ENST00000257414 CCDC180Q9P1Z9 1646 aa15.74■□□□□ 0.11
SEMA6A-201ENST00000257414 MYO15BQ96JP2 1530 aa15.67■□□□□ 0.1
SEMA6A-201ENST00000257414 TTBK1Q5TCY1 1321 aaPredicted RBP15.62■□□□□ 0.09
SEMA6A-201ENST00000257414 CCER1Q8TC90 406 aaPredicted RBP15.54■□□□□ 0.08
SEMA6A-201ENST00000257414 DCAF1Q9Y4B6 1507 aa15.49■□□□□ 0.07
SEMA6A-201ENST00000257414 APLP2Q06481 763 aa15.37■□□□□ 0.05
SEMA6A-201ENST00000257414 UBTFP17480 764 aaKnown RBP15.36■□□□□ 0.05
SEMA6A-201ENST00000257414 CENPBP07199 599 aaPredicted RBP15.33■□□□□ 0.04
SEMA6A-201ENST00000257414 PELP1Q8IZL8 1130 aaKnown RBP15.31■□□□□ 0.04
SEMA6A-201ENST00000257414 SCRIBQ14160 1630 aa15.31■□□□□ 0.04
SEMA6A-201ENST00000257414 ABCC9O60706 1549 aa15.28■□□□□ 0.04
SEMA6A-201ENST00000257414 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.03
SEMA6A-201ENST00000257414 RANGAP1P46060 587 aaPredicted RBP15.25■□□□□ 0.03
SEMA6A-201ENST00000257414 RSF1Q96T23 1441 aaPredicted RBP15.18■□□□□ 0.02
SEMA6A-201ENST00000257414 YTHDC1Q96MU7 727 aaKnown RBP15.12■□□□□ 0.01
SEMA6A-201ENST00000257414 DIEXFQ68CQ4 756 aaKnown RBP15.08■□□□□ 0
SEMA6A-201ENST00000257414 HNRNPUL2Q1KMD3 747 aaKnown RBP15.04■□□□□ -0
SEMA6A-201ENST00000257414 RB1CC1Q8TDY2 1594 aa14.95□□□□□ -0.02
SEMA6A-201ENST00000257414 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
SEMA6A-201ENST00000257414 CSRNP3Q8WYN3 585 aa14.91□□□□□ -0.02
SEMA6A-201ENST00000257414 ACIN1Q9UKV3 1341 aaKnown RBP14.89□□□□□ -0.03
SEMA6A-201ENST00000257414 GTF3C3Q9Y5Q9 886 aa14.89□□□□□ -0.03
SEMA6A-201ENST00000257414 CECR2Q9BXF3 1484 aa14.88□□□□□ -0.03
SEMA6A-201ENST00000257414 SCAF1Q9H7N4 1312 aaKnown RBP14.86□□□□□ -0.03
SEMA6A-201ENST00000257414 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.04
SEMA6A-201ENST00000257414 NACADO15069 1562 aa14.82□□□□□ -0.04
SEMA6A-201ENST00000257414 ATP1B4Q9UN42 357 aaPredicted RBP14.8□□□□□ -0.04
SEMA6A-201ENST00000257414 ITGAEP38570 1179 aa14.79□□□□□ -0.04
SEMA6A-201ENST00000257414 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.05
SEMA6A-201ENST00000257414 NEUROD1Q13562 356 aa14.76□□□□□ -0.05
SEMA6A-201ENST00000257414 CEP162Q5TB80 1403 aa14.72□□□□□ -0.05
SEMA6A-201ENST00000257414 MYT1Q01538 1121 aa14.72□□□□□ -0.05
SEMA6A-201ENST00000257414 BAZ1AQ9NRL2 1556 aaPredicted RBP14.68□□□□□ -0.06
SEMA6A-201ENST00000257414 WIZO95785 1651 aa14.65□□□□□ -0.06
SEMA6A-201ENST00000257414 EEA1Q15075 1411 aa14.63□□□□□ -0.07
SEMA6A-201ENST00000257414 TNIKQ9UKE5 1360 aa14.62□□□□□ -0.07
SEMA6A-201ENST00000257414 GOLGA3Q08378 1498 aa14.59□□□□□ -0.07
SEMA6A-201ENST00000257414 ABCC8Q09428 1581 aa14.58□□□□□ -0.07
SEMA6A-201ENST00000257414 SOGA1O94964 1423 aa14.58□□□□□ -0.08
SEMA6A-201ENST00000257414 NEFLP07196 543 aa14.58□□□□□ -0.08
SEMA6A-201ENST00000257414 CLIP1P30622 1438 aa14.57□□□□□ -0.08
SEMA6A-201ENST00000257414 CCDC88BA6NC98 1476 aa14.56□□□□□ -0.08
SEMA6A-201ENST00000257414 WRNQ14191 1432 aaPredicted RBP eCLIP14.55□□□□□ -0.08
SEMA6A-201ENST00000257414 MIER1Q8N108 512 aa14.52□□□□□ -0.08
SEMA6A-201ENST00000257414 FAM50AQ14320 339 aaKnown RBP14.49□□□□□ -0.09
SEMA6A-201ENST00000257414 CEP164Q9UPV0 1460 aa14.47□□□□□ -0.09
SEMA6A-201ENST00000257414 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.1
SEMA6A-201ENST00000257414 ERICH6Q7L0X2 663 aa14.37□□□□□ -0.11
SEMA6A-201ENST00000257414 BAZ1BQ9UIG0 1483 aaKnown RBP14.36□□□□□ -0.11
SEMA6A-201ENST00000257414 BCANQ96GW7 911 aa14.36□□□□□ -0.11
SEMA6A-201ENST00000257414 RUSC2Q8N2Y8 1516 aa14.35□□□□□ -0.11
SEMA6A-201ENST00000257414 P3H3Q8IVL6 736 aa14.35□□□□□ -0.11
SEMA6A-201ENST00000257414 SMARCA4P51532 1647 aa14.34□□□□□ -0.11
SEMA6A-201ENST00000257414 VPS8Q8N3P4 1428 aa14.32□□□□□ -0.12
SEMA6A-201ENST00000257414 CLSPNQ9HAW4 1339 aa14.29□□□□□ -0.12
SEMA6A-201ENST00000257414 SMARCA2P51531 1590 aa14.29□□□□□ -0.12
SEMA6A-201ENST00000257414 ANP32CO43423 234 aa14.27□□□□□ -0.12
SEMA6A-201ENST00000257414 DDX10Q13206 875 aaKnown RBP14.24□□□□□ -0.13
SEMA6A-201ENST00000257414 KIF27Q86VH2 1401 aa14.21□□□□□ -0.14
SEMA6A-201ENST00000257414 TRIM52Q96A61 297 aa14.19□□□□□ -0.14
SEMA6A-201ENST00000257414 RAPGEF2Q9Y4G8 1499 aa14.18□□□□□ -0.14
SEMA6A-201ENST00000257414 POLR3GLQ9BT43 218 aa14.17□□□□□ -0.14
SEMA6A-201ENST00000257414 FKBP8Q14318 412 aa14.17□□□□□ -0.14
SEMA6A-201ENST00000257414 KANK4Q5T7N3 995 aaPredicted RBP14.17□□□□□ -0.14
SEMA6A-201ENST00000257414 CNGB1Q14028 1251 aaPredicted RBP14.17□□□□□ -0.14
SEMA6A-201ENST00000257414 CCNB3Q8WWL7 1395 aa14.14□□□□□ -0.15
SEMA6A-201ENST00000257414 TONSLQ96HA7 1378 aa14.13□□□□□ -0.15
SEMA6A-201ENST00000257414 HIRIP3Q9BW71 556 aaPredicted RBP14.12□□□□□ -0.15
SEMA6A-201ENST00000257414 ATAD2BQ9ULI0 1458 aa14.1□□□□□ -0.15
SEMA6A-201ENST00000257414 SUPT16HQ9Y5B9 1047 aaKnown RBP14.08□□□□□ -0.16
SEMA6A-201ENST00000257414 SIN3AQ96ST3 1273 aa14.06□□□□□ -0.16
SEMA6A-201ENST00000257414 DHX57Q6P158 1386 aaKnown RBP14.05□□□□□ -0.16
SEMA6A-201ENST00000257414 ARID3CA6NKF2 412 aa14.04□□□□□ -0.16
SEMA6A-201ENST00000257414 SYNJ1O43426 1573 aa14.03□□□□□ -0.16
SEMA6A-201ENST00000257414 CUX2O14529 1486 aa14.02□□□□□ -0.16
SEMA6A-201ENST00000257414 MTUS2Q5JR59 1369 aa14.02□□□□□ -0.16
SEMA6A-201ENST00000257414 HNRNPUQ00839 825 aaKnown RBP eCLIP14.02□□□□□ -0.17
SEMA6A-201ENST00000257414 CDK11AQ9UQ88 783 aaPredicted RBP14.02□□□□□ -0.17
SEMA6A-201ENST00000257414 KIF21BO75037 1637 aa14.02□□□□□ -0.17
SEMA6A-201ENST00000257414 RAB3GAP2Q9H2M9 1393 aa13.99□□□□□ -0.17
SEMA6A-201ENST00000257414 CARMIL1Q5VZK9 1371 aa13.99□□□□□ -0.17
SEMA6A-201ENST00000257414 CHIC2Q9UKJ5 165 aa13.98□□□□□ -0.17
SEMA6A-201ENST00000257414 ZNF326Q5BKZ1 582 aaKnown RBP13.97□□□□□ -0.17
SEMA6A-201ENST00000257414 SETD5Q9C0A6 1442 aa13.97□□□□□ -0.17
SEMA6A-201ENST00000257414 EIF4G1Q04637 1599 aaKnown RBP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms