RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C YMR254CQ04838 102 aa5.93□□□□□ -1.46
UME1YPL139C YOL118CQ08259 102 aa5.93□□□□□ -1.46
UME1YPL139C RFM1Q12192 310 aa5.93□□□□□ -1.46
UME1YPL139C TY1A-DR3Q12441 440 aa5.93□□□□□ -1.46
UME1YPL139C MDN1Q12019 4910 aaKnown RBP5.93□□□□□ -1.46
UME1YPL139C GCN4P03069 281 aa5.93□□□□□ -1.46
UME1YPL139C RPL25P04456 142 aaKnown RBP5.93□□□□□ -1.46
UME1YPL139C PET122P10355 254 aa5.93□□□□□ -1.46
UME1YPL139C MRPS28P21771 286 aa5.93□□□□□ -1.46
UME1YPL139C ACH1P32316 526 aa5.93□□□□□ -1.46
UME1YPL139C MRX5P47007 382 aa5.93□□□□□ -1.46
UME1YPL139C YPL067CQ02754 198 aa5.93□□□□□ -1.46
UME1YPL139C YMR166CQ03829 368 aa5.93□□□□□ -1.46
UME1YPL139C ALG6Q12001 544 aaKnown RBP5.93□□□□□ -1.46
UME1YPL139C ACP1P32463 125 aa5.92□□□□□ -1.46
UME1YPL139C YBL010CP32788 280 aa5.92□□□□□ -1.46
UME1YPL139C YBR137WP38276 179 aa5.92□□□□□ -1.46
UME1YPL139C GPI14P47088 403 aaKnown RBP5.92□□□□□ -1.46
UME1YPL139C BXI1P48558 297 aa5.92□□□□□ -1.46
UME1YPL139C ARG5,6Q01217 863 aa5.92□□□□□ -1.46
UME1YPL139C ATG17Q06410 417 aa5.92□□□□□ -1.46
UME1YPL139C YOR352WQ08816 343 aa5.92□□□□□ -1.46
UME1YPL139C QCR7P00128 127 aa5.91□□□□□ -1.46
UME1YPL139C TMA19P35691 167 aaKnown RBP5.91□□□□□ -1.46
UME1YPL139C SWD3P38123 315 aa5.91□□□□□ -1.46
UME1YPL139C GPX2P38143 162 aa5.91□□□□□ -1.46
UME1YPL139C DDI1P40087 428 aa5.91□□□□□ -1.46
UME1YPL139C XPT1P47165 209 aa5.91□□□□□ -1.46
UME1YPL139C MRH4P53166 561 aa5.91□□□□□ -1.46
UME1YPL139C RPL21AQ02753 160 aaKnown RBP5.91□□□□□ -1.46
UME1YPL139C INP53Q12271 1107 aa5.91□□□□□ -1.46
UME1YPL139C RPL21BQ12672 160 aaKnown RBP5.91□□□□□ -1.46
UME1YPL139C MRPL33P20084 86 aa5.9□□□□□ -1.47
UME1YPL139C ATG22P25568 528 aa5.9□□□□□ -1.47
UME1YPL139C PRE4P30657 266 aa5.9□□□□□ -1.47
UME1YPL139C VMA5P31412 392 aaKnown RBP5.9□□□□□ -1.47
UME1YPL139C YUH1P35127 236 aa5.9□□□□□ -1.47
UME1YPL139C SHE2P36068 246 aaKnown RBP RIP-Chip data5.9□□□□□ -1.47not detected
UME1YPL139C ADH5P38113 351 aaKnown RBP5.9□□□□□ -1.47
UME1YPL139C YNL234WP53857 426 aa5.9□□□□□ -1.47
UME1YPL139C EOS1P53938 366 aa5.9□□□□□ -1.47
UME1YPL139C TMA20P89886 181 aaPredicted RBP5.9□□□□□ -1.47
UME1YPL139C RRP17Q04031 235 aaPredicted RBP5.9□□□□□ -1.47
UME1YPL139C UPS1Q05776 175 aa5.9□□□□□ -1.47
UME1YPL139C ARR2Q06597 130 aa5.9□□□□□ -1.47
UME1YPL139C VAM3Q12241 283 aa5.9□□□□□ -1.47
UME1YPL139C IES3Q12345 250 aa5.9□□□□□ -1.47
UME1YPL139C YIL002W-AQ3E7Z5 69 aa5.9□□□□□ -1.47
UME1YPL139C ODC2Q99297 307 aa5.9□□□□□ -1.47
UME1YPL139C RPS31P05759 152 aaKnown RBP5.89□□□□□ -1.47
UME1YPL139C ATP10P18496 279 aa5.89□□□□□ -1.47
UME1YPL139C PRS2P38620 318 aaKnown RBP5.89□□□□□ -1.47
UME1YPL139C OTU1P43558 301 aa5.89□□□□□ -1.47
UME1YPL139C YGR042WP53227 271 aa5.89□□□□□ -1.47
UME1YPL139C YGR054WP53235 642 aaKnown RBP5.89□□□□□ -1.47
UME1YPL139C VHT1P53241 593 aa5.89□□□□□ -1.47
UME1YPL139C CPR8P53728 308 aa5.89□□□□□ -1.47
UME1YPL139C CTF19Q02732 369 aa5.89□□□□□ -1.47
UME1YPL139C FCY1Q12178 158 aa5.89□□□□□ -1.47
UME1YPL139C ATO3Q12359 275 aa5.89□□□□□ -1.47
UME1YPL139C OLE1P21147 510 aaKnown RBP5.88□□□□□ -1.47
UME1YPL139C RFA1P22336 621 aaKnown RBP5.88□□□□□ -1.47
UME1YPL139C OCH1P31755 480 aa5.88□□□□□ -1.47
UME1YPL139C ZUO1P32527 433 aaKnown RBP5.88□□□□□ -1.47
UME1YPL139C AFR1P33304 620 aa5.88□□□□□ -1.47
UME1YPL139C YCR041WP37265 110 aa5.88□□□□□ -1.47
UME1YPL139C HTD2P38790 280 aaKnown RBP5.88□□□□□ -1.47
UME1YPL139C AIM46P38885 310 aa5.88□□□□□ -1.47
UME1YPL139C WWM1P43582 211 aaKnown RBP5.88□□□□□ -1.47
UME1YPL139C ATG18P43601 500 aa5.88□□□□□ -1.47
UME1YPL139C YGL114WP53134 725 aa5.88□□□□□ -1.47
UME1YPL139C HSK3P69852 69 aa5.88□□□□□ -1.47
UME1YPL139C ADH6Q04894 360 aaKnown RBP5.88□□□□□ -1.47
UME1YPL139C PEX27Q08580 376 aa5.88□□□□□ -1.47
UME1YPL139C ADE8P04161 214 aa5.87□□□□□ -1.47
UME1YPL139C CCS1P40202 249 aaKnown RBP5.87□□□□□ -1.47
UME1YPL139C HNT2P49775 206 aa5.87□□□□□ -1.47
UME1YPL139C YPL108WQ02872 168 aaPredicted RBP5.87□□□□□ -1.47
UME1YPL139C LIP2Q06005 328 aa5.87□□□□□ -1.47
UME1YPL139C RAX2Q12465 1220 aa5.87□□□□□ -1.47
UME1YPL139C ATG40Q99325 256 aa5.87□□□□□ -1.47
UME1YPL139C GDH1P07262 454 aaKnown RBP5.86□□□□□ -1.47
UME1YPL139C BUD23P25627 275 aaPredicted RBP5.86□□□□□ -1.47
UME1YPL139C HMX1P32339 317 aa5.86□□□□□ -1.47
UME1YPL139C SWD2P36104 329 aaPredicted RBP5.86□□□□□ -1.47
UME1YPL139C CUE1P38428 203 aa5.86□□□□□ -1.47
UME1YPL139C SYS1P41544 203 aa5.86□□□□□ -1.47
UME1YPL139C BNA6P43619 295 aa5.86□□□□□ -1.47
UME1YPL139C TAX4P47030 604 aa5.86□□□□□ -1.47
UME1YPL139C OKP1P53298 406 aa5.86□□□□□ -1.47
UME1YPL139C ERV29P53337 310 aa5.86□□□□□ -1.47
UME1YPL139C MRPL13Q02204 264 aa5.86□□□□□ -1.47
UME1YPL139C MGR3Q04472 501 aa5.86□□□□□ -1.47
UME1YPL139C GPN3Q06543 272 aa5.86□□□□□ -1.47
UME1YPL139C SRL1Q08673 210 aa5.86□□□□□ -1.47
UME1YPL139C CHO1P08456 276 aa5.85□□□□□ -1.47
UME1YPL139C SPS4P09937 338 aa5.85□□□□□ -1.47
UME1YPL139C RPL3P14126 387 aaKnown RBP5.85□□□□□ -1.47
UME1YPL139C YNK1P36010 153 aaKnown RBP5.85□□□□□ -1.47
UME1YPL139C AGE2P40529 298 aa5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms