RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C CDC8P00572 216 aa1.18□□□□□ -2.22
SWT1YOR166C TCP1P12612 559 aaKnown RBP1.18□□□□□ -2.22
SWT1YOR166C RPF1P38805 295 aaKnown RBP1.18□□□□□ -2.22
SWT1YOR166C RMD6P39975 231 aa1.18□□□□□ -2.22
SWT1YOR166C PGD1P40356 397 aa1.18□□□□□ -2.22
SWT1YOR166C RPL33BP41056 107 aaKnown RBP1.18□□□□□ -2.22
SWT1YOR166C TRM9P49957 279 aa1.18□□□□□ -2.22
SWT1YOR166C CYT2Q00873 224 aa1.18□□□□□ -2.22
SWT1YOR166C YDR248CQ03786 193 aa1.18□□□□□ -2.22
SWT1YOR166C YLR283WQ05867 314 aa1.18□□□□□ -2.22
SWT1YOR166C TPO4Q12256 659 aa1.18□□□□□ -2.22
SWT1YOR166C ATG31Q12421 196 aa1.18□□□□□ -2.22
SWT1YOR166C SCL1P21243 252 aaKnown RBP1.17□□□□□ -2.22
SWT1YOR166C VMA6P32366 345 aaKnown RBP1.17□□□□□ -2.22
SWT1YOR166C SNC2P33328 115 aa1.17□□□□□ -2.22
SWT1YOR166C VPS21P36017 210 aaKnown RBP1.17□□□□□ -2.22
SWT1YOR166C ECM4P36156 370 aa1.17□□□□□ -2.22
SWT1YOR166C HOC1P47124 396 aa1.17□□□□□ -2.22
SWT1YOR166C YGL034CP53186 121 aa1.17□□□□□ -2.22
SWT1YOR166C CDC123Q05791 360 aa1.17□□□□□ -2.22
SWT1YOR166C NIP7Q08962 181 aaKnown RBP1.17□□□□□ -2.22
SWT1YOR166C RUD3Q12234 484 aaKnown RBP1.17□□□□□ -2.22
SWT1YOR166C SEY1Q99287 776 aa1.17□□□□□ -2.22
SWT1YOR166C BCY1P07278 416 aaKnown RBP1.16□□□□□ -2.22
SWT1YOR166C NHP6BP11633 99 aaKnown RBP1.16□□□□□ -2.22
SWT1YOR166C URA6P15700 204 aa1.16□□□□□ -2.22
SWT1YOR166C YET1P35723 206 aa1.16□□□□□ -2.22
SWT1YOR166C AGE2P40529 298 aa1.16□□□□□ -2.22
SWT1YOR166C TIR3P40552 269 aa1.16□□□□□ -2.22
SWT1YOR166C BXI1P48558 297 aa1.16□□□□□ -2.22
SWT1YOR166C AIF1P52923 378 aa1.16□□□□□ -2.22
SWT1YOR166C CAB4P53332 305 aa1.16□□□□□ -2.22
SWT1YOR166C YNL046WP53956 172 aa1.16□□□□□ -2.22
SWT1YOR166C RSM10Q03201 203 aa1.16□□□□□ -2.22
SWT1YOR166C DCR2Q05924 578 aa1.16□□□□□ -2.22
SWT1YOR166C MDM32Q12171 622 aa1.16□□□□□ -2.22
SWT1YOR166C TSC3Q3E790 80 aa1.16□□□□□ -2.22
SWT1YOR166C SIR4P11978 1358 aa1.15□□□□□ -2.22
SWT1YOR166C ERD2P18414 219 aa1.15□□□□□ -2.23
SWT1YOR166C PTM1P32857 523 aa1.15□□□□□ -2.23
SWT1YOR166C YKR045CP36138 183 aa1.15□□□□□ -2.23
SWT1YOR166C TRM5P38793 499 aa1.15□□□□□ -2.23
SWT1YOR166C YRB1P41920 201 aaKnown RBP1.15□□□□□ -2.23
SWT1YOR166C YPL162CQ12042 273 aa1.15□□□□□ -2.23
SWT1YOR166C JLP1Q12358 412 aa1.15□□□□□ -2.23
SWT1YOR166C FLO9P39712 1322 aa1.14□□□□□ -2.23
SWT1YOR166C PET9P18239 318 aaKnown RBP1.14□□□□□ -2.23
SWT1YOR166C STE18P18852 110 aa1.14□□□□□ -2.23
SWT1YOR166C MGM101P32787 269 aaKnown RBP1.14□□□□□ -2.23
SWT1YOR166C ECM33P38248 429 aaKnown RBP1.14□□□□□ -2.23
SWT1YOR166C YBR096WP38256 230 aa1.14□□□□□ -2.23
SWT1YOR166C YER085CP40058 173 aa1.14□□□□□ -2.23
SWT1YOR166C YNL217WP40152 326 aa1.14□□□□□ -2.23
SWT1YOR166C LPP1Q04396 274 aa1.14□□□□□ -2.23
SWT1YOR166C INO80P53115 1489 aa1.14□□□□□ -2.23
SWT1YOR166C TUS1Q06412 1307 aa1.13□□□□□ -2.23
SWT1YOR166C THP2O13539 261 aaKnown RBP1.13□□□□□ -2.23
SWT1YOR166C RPL25P04456 142 aaKnown RBP1.13□□□□□ -2.23
SWT1YOR166C YBR121C-AP0C5L4 52 aa1.13□□□□□ -2.23
SWT1YOR166C IDH1P28834 360 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
SWT1YOR166C YBR219CP38317 127 aa1.13□□□□□ -2.23
SWT1YOR166C POP4P38336 279 aa1.13□□□□□ -2.23
SWT1YOR166C MIC12P38341 106 aa1.13□□□□□ -2.23
SWT1YOR166C SVP26P38869 228 aa1.13□□□□□ -2.23
SWT1YOR166C ICE2P40499 491 aa1.13□□□□□ -2.23
SWT1YOR166C BRR6P53062 197 aa1.13□□□□□ -2.23
SWT1YOR166C TOS8P53147 276 aa1.13□□□□□ -2.23
SWT1YOR166C DID2P69771 204 aa1.13□□□□□ -2.23
SWT1YOR166C SPT3P06844 337 aa1.12□□□□□ -2.23
SWT1YOR166C YMR31P19955 123 aa1.12□□□□□ -2.23
SWT1YOR166C TFC1P32367 649 aa1.12□□□□□ -2.23
SWT1YOR166C APS1P35181 156 aa1.12□□□□□ -2.23
SWT1YOR166C YKL075CP36083 450 aa1.12□□□□□ -2.23
SWT1YOR166C AIM2P39721 246 aa1.12□□□□□ -2.23
SWT1YOR166C AVT2P39981 480 aa1.12□□□□□ -2.23
SWT1YOR166C RTR1P40084 226 aaPredicted RBP1.12□□□□□ -2.23
SWT1YOR166C PEX17P40155 199 aa1.12□□□□□ -2.23
SWT1YOR166C RPC17P47076 161 aa1.12□□□□□ -2.23
SWT1YOR166C EAF6P47128 113 aa1.12□□□□□ -2.23
SWT1YOR166C NUP57P48837 541 aa1.12□□□□□ -2.23
SWT1YOR166C MIC26P50087 233 aa1.12□□□□□ -2.23
SWT1YOR166C NOP13P53883 403 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
SWT1YOR166C BNA7Q04066 261 aa1.12□□□□□ -2.23
SWT1YOR166C SML1Q04964 104 aa1.12□□□□□ -2.23
SWT1YOR166C FUS2Q05670 677 aa1.12□□□□□ -2.23
SWT1YOR166C ARR2Q06597 130 aa1.12□□□□□ -2.23
SWT1YOR166C FKS1P38631 1876 aaKnown RBP1.12□□□□□ -2.23
SWT1YOR166C CDC7P06243 507 aa1.11□□□□□ -2.23
SWT1YOR166C MATALPHA1P0CY06 175 aa1.11□□□□□ -2.23
SWT1YOR166C HMLALPHA1P0CY07 175 aa1.11□□□□□ -2.23
SWT1YOR166C URA5P13298 226 aaKnown RBP1.11□□□□□ -2.23
SWT1YOR166C GRX2P17695 143 aaKnown RBP1.11□□□□□ -2.23
SWT1YOR166C CKS1P20486 150 aaKnown RBP1.11□□□□□ -2.23
SWT1YOR166C TMA19P35691 167 aaKnown RBP1.11□□□□□ -2.23
SWT1YOR166C YBR209WP38311 105 aa1.11□□□□□ -2.23
SWT1YOR166C FAR7P43592 221 aa1.11□□□□□ -2.23
SWT1YOR166C CGR1P53188 120 aa1.11□□□□□ -2.23
SWT1YOR166C MZM1Q03429 123 aaPredicted RBP1.11□□□□□ -2.23
SWT1YOR166C YRA1Q12159 226 aaKnown RBP1.11□□□□□ -2.23
SWT1YOR166C YDL180WQ12301 547 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms