RNA–Protein interactions for RNA: YNR023W

SNF12, Transcript of 73 kDa subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF12, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF12YNR023W ABF2Q02486 183 aa1.69□□□□□ -2.14
SNF12YNR023W CWC21Q03375 135 aaKnown RBP1.69□□□□□ -2.14
SNF12YNR023W TPO4Q12256 659 aa1.69□□□□□ -2.14
SNF12YNR023W COX5AP00424 153 aa1.68□□□□□ -2.14
SNF12YNR023W YBR121C-AP0C5L4 52 aa1.68□□□□□ -2.14
SNF12YNR023W COQ1P18900 473 aa1.68□□□□□ -2.14
SNF12YNR023W RPB4P20433 221 aaPredicted RBP1.68□□□□□ -2.14
SNF12YNR023W YPT52P36018 234 aaKnown RBP1.68□□□□□ -2.14
SNF12YNR023W RIB1P38066 345 aa1.68□□□□□ -2.14
SNF12YNR023W URA8P38627 578 aaPredicted RBP1.68□□□□□ -2.14
SNF12YNR023W RPF1P38805 295 aaKnown RBP1.68□□□□□ -2.14
SNF12YNR023W YML096WQ04489 525 aa1.68□□□□□ -2.14
SNF12YNR023W SSQ1Q05931 657 aaPredicted RBP1.68□□□□□ -2.14
SNF12YNR023W HEM25Q07534 307 aa1.68□□□□□ -2.14
SNF12YNR023W MSA1Q08471 629 aa1.68□□□□□ -2.14
SNF12YNR023W DCN1Q12395 269 aa1.68□□□□□ -2.14
SNF12YNR023W EMC6Q12431 108 aa1.68□□□□□ -2.14
SNF12YNR023W LSO2Q3E772 92 aaKnown RBP1.68□□□□□ -2.14
SNF12YNR023W YPL229WQ99395 206 aa1.68□□□□□ -2.14
SNF12YNR023W URA6P15700 204 aa1.67□□□□□ -2.14
SNF12YNR023W STE18P18852 110 aa1.67□□□□□ -2.14
SNF12YNR023W SCO1P23833 295 aa1.67□□□□□ -2.14
SNF12YNR023W RTC3P38804 111 aaPredicted RBP1.67□□□□□ -2.14
SNF12YNR023W PEX17P40155 199 aa1.67□□□□□ -2.14
SNF12YNR023W RPA43P46669 326 aa1.67□□□□□ -2.14
SNF12YNR023W SNX4P47057 423 aa1.67□□□□□ -2.14
SNF12YNR023W BRR6P53062 197 aa1.67□□□□□ -2.14
SNF12YNR023W TOS8P53147 276 aa1.67□□□□□ -2.14
SNF12YNR023W IGO1P53897 168 aa1.67□□□□□ -2.14
SNF12YNR023W RGM1Q00453 211 aa1.67□□□□□ -2.14
SNF12YNR023W NIP7Q08962 181 aaKnown RBP1.67□□□□□ -2.14
SNF12YNR023W AKR2Q12013 749 aa1.67□□□□□ -2.14
SNF12YNR023W YOR283WQ12040 230 aaKnown RBP1.67□□□□□ -2.14
SNF12YNR023W YAR068WP39564 161 aa1.66□□□□□ -2.14
SNF12YNR023W MNN5P46982 586 aa1.66□□□□□ -2.14
SNF12YNR023W ERV29P53337 310 aa1.66□□□□□ -2.14
SNF12YNR023W ATG39Q06159 398 aa1.66□□□□□ -2.14
SNF12YNR023W MHT1Q12525 324 aa1.66□□□□□ -2.14
SNF12YNR023W SIR4P11978 1358 aa1.66□□□□□ -2.14
SNF12YNR023W RPL28P02406 149 aaKnown RBP1.66□□□□□ -2.14
SNF12YNR023W PUT1P09368 476 aa1.66□□□□□ -2.14
SNF12YNR023W YHR032W-AP0C5N6 59 aa1.66□□□□□ -2.14
SNF12YNR023W SNF6P18888 332 aa1.66□□□□□ -2.14
SNF12YNR023W PRP18P33411 251 aaPredicted RBP1.66□□□□□ -2.14
SNF12YNR023W YBR063CP38083 404 aa1.66□□□□□ -2.14
SNF12YNR023W ERG28P40030 148 aa1.66□□□□□ -2.14
SNF12YNR023W SMD3P43321 101 aaKnown RBP1.66□□□□□ -2.14
SNF12YNR023W NUP57P48837 541 aa1.66□□□□□ -2.14
SNF12YNR023W PRM15Q03262 622 aa1.66□□□□□ -2.14
SNF12YNR023W YMD8Q03697 442 aa1.66□□□□□ -2.14
SNF12YNR023W CGI121Q03705 181 aaKnown RBP1.66□□□□□ -2.14
SNF12YNR023W BNA7Q04066 261 aa1.66□□□□□ -2.14
SNF12YNR023W YKL183C-AQ3E765 70 aa1.66□□□□□ -2.14
SNF12YNR023W SPT6P23615 1451 aaKnown RBP1.65□□□□□ -2.15
SNF12YNR023W RPL9AP05738 191 aaKnown RBP1.65□□□□□ -2.15
SNF12YNR023W FCY2P17064 533 aa1.65□□□□□ -2.15
SNF12YNR023W DOA4P32571 926 aa1.65□□□□□ -2.15
SNF12YNR023W VMA11P32842 164 aa1.65□□□□□ -2.15
SNF12YNR023W ECM33P38248 429 aaKnown RBP1.65□□□□□ -2.15
SNF12YNR023W RAD17P48581 401 aa1.65□□□□□ -2.15
SNF12YNR023W RPL9BP51401 191 aaKnown RBP1.65□□□□□ -2.15
SNF12YNR023W JLP1Q12358 412 aa1.65□□□□□ -2.15
SNF12YNR023W RKR1Q04781 1562 aa1.65□□□□□ -2.15
SNF12YNR023W FKS1P38631 1876 aaKnown RBP1.64□□□□□ -2.15
SNF12YNR023W ARG80P07249 177 aa1.64□□□□□ -2.15
SNF12YNR023W CDC33P07260 213 aaKnown RBP1.64□□□□□ -2.15
SNF12YNR023W SRY1P36007 326 aa1.64□□□□□ -2.15
SNF12YNR023W YKT6P36015 200 aaKnown RBP1.64□□□□□ -2.15
SNF12YNR023W YOR062CP36025 268 aa1.64□□□□□ -2.15
SNF12YNR023W CBT1P36038 271 aaPredicted RBP1.64□□□□□ -2.15
SNF12YNR023W DOG1P38774 246 aa1.64□□□□□ -2.15
SNF12YNR023W CTR2P38865 189 aa1.64□□□□□ -2.15
SNF12YNR023W PRM8P53174 237 aa1.64□□□□□ -2.15
SNF12YNR023W ALG13P53178 202 aa1.64□□□□□ -2.15
SNF12YNR023W PRX1P34227 261 aaKnown RBP1.63□□□□□ -2.15
SNF12YNR023W GRE3P38715 327 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
SNF12YNR023W DOG2P38773 246 aa1.63□□□□□ -2.15
SNF12YNR023W YNL194CP40169 301 aa1.63□□□□□ -2.15
SNF12YNR023W FAR7P43592 221 aa1.63□□□□□ -2.15
SNF12YNR023W IRC18P47056 224 aa1.63□□□□□ -2.15
SNF12YNR023W BXI1P48558 297 aa1.63□□□□□ -2.15
SNF12YNR023W MGA1P53050 456 aa1.63□□□□□ -2.15
SNF12YNR023W CGR1P53188 120 aa1.63□□□□□ -2.15
SNF12YNR023W DAD3P69850 94 aa1.63□□□□□ -2.15
SNF12YNR023W NUM1Q00402 2748 aa1.63□□□□□ -2.15
SNF12YNR023W YHR139C-AO13536 103 aa1.63□□□□□ -2.15
SNF12YNR023W CDC28P00546 298 aaKnown RBP1.63□□□□□ -2.15
SNF12YNR023W MSW1P04803 379 aa1.63□□□□□ -2.15
SNF12YNR023W GRX2P17695 143 aaKnown RBP1.63□□□□□ -2.15
SNF12YNR023W ADO1P47143 340 aaKnown RBP1.63□□□□□ -2.15
SNF12YNR023W YNL010WP53981 241 aaKnown RBP1.63□□□□□ -2.15
SNF12YNR023W YDR248CQ03786 193 aa1.63□□□□□ -2.15
SNF12YNR023W GIS3Q12418 502 aa1.63□□□□□ -2.15
SNF12YNR023W APS1P35181 156 aa1.62□□□□□ -2.15
SNF12YNR023W IRC22P40006 225 aa1.62□□□□□ -2.15
SNF12YNR023W YIL001WP40560 513 aa1.62□□□□□ -2.15
SNF12YNR023W CWC23P52868 283 aaPredicted RBP1.62□□□□□ -2.15
SNF12YNR023W YMR226CQ05016 267 aaKnown RBP1.62□□□□□ -2.15
SNF12YNR023W ADF1Q2V2Q1 113 aa1.62□□□□□ -2.15
SNF12YNR023W CDC36P06100 191 aaPredicted RBP1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 79.6 ms