RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	YGR168C	P53293	376 aa		4.61	□□□□□ -1.67
CSL4	YNL232W	HHT1	P61830	136 aa		4.61	□□□□□ -1.67
CSL4	YNL232W	YDR248C	Q03786	193 aa		4.61	□□□□□ -1.67
CSL4	YNL232W	CAC2	Q04199	468 aa		4.61	□□□□□ -1.67
CSL4	YNL232W	ATG17	Q06410	417 aa		4.61	□□□□□ -1.67
CSL4	YNL232W	YFH1	Q07540	174 aa		4.61	□□□□□ -1.67
CSL4	YNL232W	TGS1	Q12052	315 aa		4.61	□□□□□ -1.67
CSL4	YNL232W	VPS63	O13549	108 aa		4.6	□□□□□ -1.67
CSL4	YNL232W	TOM40	P23644	387 aa	Known RBP	4.6	□□□□□ -1.67
CSL4	YNL232W	ATP7	P30902	174 aa		4.6	□□□□□ -1.67
CSL4	YNL232W	ARO4	P32449	370 aa	Known RBP	4.6	□□□□□ -1.67
CSL4	YNL232W	AUA1	P32450	94 aa		4.6	□□□□□ -1.67
CSL4	YNL232W	MRPL4	P36517	319 aa		4.6	□□□□□ -1.67
CSL4	YNL232W	PIR5	P46999	287 aa		4.6	□□□□□ -1.67
CSL4	YNL232W	TIM21	P53220	239 aa		4.6	□□□□□ -1.67
CSL4	YNL232W	SPO19	Q03029	223 aa		4.6	□□□□□ -1.67
CSL4	YNL232W	SPG4	Q04438	115 aa		4.6	□□□□□ -1.67
CSL4	YNL232W	ORM2	Q06144	216 aa		4.6	□□□□□ -1.67
CSL4	YNL232W	SNF6	P18888	332 aa		4.59	□□□□□ -1.67
CSL4	YNL232W	SAG1	P20840	650 aa		4.59	□□□□□ -1.67
CSL4	YNL232W	ANR2	P36090	516 aa	Predicted RBP	4.59	□□□□□ -1.67
CSL4	YNL232W	DDI1	P40087	428 aa		4.59	□□□□□ -1.67
CSL4	YNL232W	XPT1	P47165	209 aa		4.59	□□□□□ -1.67
CSL4	YNL232W	PXR1	P53335	271 aa	Predicted RBP	4.59	□□□□□ -1.67
CSL4	YNL232W	SSU72	P53538	206 aa	Predicted RBP	4.59	□□□□□ -1.67
CSL4	YNL232W	ATP23	P53722	227 aa		4.59	□□□□□ -1.67
CSL4	YNL232W	SAM50	P53969	484 aa		4.59	□□□□□ -1.67
CSL4	YNL232W	GPN3	Q06543	272 aa		4.59	□□□□□ -1.67
CSL4	YNL232W	AEP3	Q12089	606 aa		4.59	□□□□□ -1.67
CSL4	YNL232W	RPL24A	P04449	155 aa	Known RBP	4.58	□□□□□ -1.68
CSL4	YNL232W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
CSL4	YNL232W	SLM4	P38247	162 aa		4.58	□□□□□ -1.68
CSL4	YNL232W	SPO73	P40031	143 aa		4.58	□□□□□ -1.68
CSL4	YNL232W	HMS2	P47175	358 aa		4.58	□□□□□ -1.68
CSL4	YNL232W	VMA10	P48836	114 aa	Known RBP	4.58	□□□□□ -1.68
CSL4	YNL232W	USE1	P53146	245 aa		4.58	□□□□□ -1.68
CSL4	YNL232W	PNC1	P53184	216 aa	Known RBP	4.58	□□□□□ -1.68
CSL4	YNL232W	YNR048W	P53740	393 aa		4.58	□□□□□ -1.68
CSL4	YNL232W	SPR6	Q01684	191 aa		4.58	□□□□□ -1.68
CSL4	YNL232W	RFU1	Q08003	200 aa		4.58	□□□□□ -1.68
CSL4	YNL232W	YHR212W-A	P0CX91	67 aa		4.57	□□□□□ -1.68
CSL4	YNL232W	RPL30	P14120	105 aa	Known RBP	4.57	□□□□□ -1.68
CSL4	YNL232W	HXT2	P23585	541 aa		4.57	□□□□□ -1.68
CSL4	YNL232W	RPS20	P38701	121 aa	Known RBP	4.57	□□□□□ -1.68
CSL4	YNL232W	YER079W	P40052	210 aa	Known RBP	4.57	□□□□□ -1.68
CSL4	YNL232W	TIR3	P40552	269 aa		4.57	□□□□□ -1.68
CSL4	YNL232W	YNR071C	P53757	342 aa		4.57	□□□□□ -1.68
CSL4	YNL232W	PEX12	Q04370	399 aa		4.57	□□□□□ -1.68
CSL4	YNL232W	ARP10	Q04549	284 aa		4.57	□□□□□ -1.68
CSL4	YNL232W	LYS21	Q12122	440 aa	Known RBP	4.57	□□□□□ -1.68
CSL4	YNL232W	ATP10	P18496	279 aa		4.56	□□□□□ -1.68
CSL4	YNL232W	CHL4	P38907	458 aa		4.56	□□□□□ -1.68
CSL4	YNL232W	PCL6	P40038	420 aa		4.56	□□□□□ -1.68
CSL4	YNL232W	SFH5	P47008	294 aa		4.56	□□□□□ -1.68
CSL4	YNL232W	LSM1	P47017	172 aa	Known RBP	4.56	□□□□□ -1.68
CSL4	YNL232W	ECM27	P47144	725 aa		4.56	□□□□□ -1.68
CSL4	YNL232W	SLX9	P53251	210 aa	Predicted RBP	4.56	□□□□□ -1.68
CSL4	YNL232W	GPI1	P53306	609 aa		4.56	□□□□□ -1.68
CSL4	YNL232W	YPL067C	Q02754	198 aa		4.56	□□□□□ -1.68
CSL4	YNL232W	YMR254C	Q04838	102 aa		4.56	□□□□□ -1.68
CSL4	YNL232W	MRX8	Q05473	314 aa		4.56	□□□□□ -1.68
CSL4	YNL232W	YLR283W	Q05867	314 aa		4.56	□□□□□ -1.68
CSL4	YNL232W	YOR289W	Q12012	251 aa	Predicted RBP	4.56	□□□□□ -1.68
CSL4	YNL232W	FCY1	Q12178	158 aa		4.56	□□□□□ -1.68
CSL4	YNL232W	RIB3	Q99258	208 aa		4.56	□□□□□ -1.68
CSL4	YNL232W	YCR061W	P25639	631 aa		4.55	□□□□□ -1.68
CSL4	YNL232W	FUN19	P28003	413 aa	Predicted RBP	4.55	□□□□□ -1.68
CSL4	YNL232W	SEC66	P33754	206 aa		4.55	□□□□□ -1.68
CSL4	YNL232W	YBR144C	P34215	104 aa		4.55	□□□□□ -1.68
CSL4	YNL232W	CMC1	P36064	111 aa		4.55	□□□□□ -1.68
CSL4	YNL232W	AIM29	P36154	155 aa		4.55	□□□□□ -1.68
CSL4	YNL232W	SKG1	P36169	355 aa		4.55	□□□□□ -1.68
CSL4	YNL232W	FRM2	P37261	193 aa		4.55	□□□□□ -1.68
CSL4	YNL232W	THI2	P38141	450 aa		4.55	□□□□□ -1.68
CSL4	YNL232W	CDS1	P38221	457 aa		4.55	□□□□□ -1.68
CSL4	YNL232W	VMA22	P38784	181 aa		4.55	□□□□□ -1.68
CSL4	YNL232W	TRM5	P38793	499 aa		4.55	□□□□□ -1.68
CSL4	YNL232W	YMR226C	Q05016	267 aa	Known RBP	4.55	□□□□□ -1.68
CSL4	YNL232W	YLR281C	Q05863	155 aa		4.55	□□□□□ -1.68
CSL4	YNL232W	RRG8	Q06109	277 aa		4.55	□□□□□ -1.68
CSL4	YNL232W	YOL029C	Q08187	201 aa		4.55	□□□□□ -1.68
CSL4	YNL232W	GDH1	P07262	454 aa	Known RBP	4.54	□□□□□ -1.68
CSL4	YNL232W	AQY1	P0CD91	305 aa		4.54	□□□□□ -1.68
CSL4	YNL232W	PHO85	P17157	305 aa		4.54	□□□□□ -1.68
CSL4	YNL232W	INO2	P26798	304 aa		4.54	□□□□□ -1.68
CSL4	YNL232W	ZUO1	P32527	433 aa	Known RBP	4.54	□□□□□ -1.68
CSL4	YNL232W	SIP1	P32578	815 aa		4.54	□□□□□ -1.68
CSL4	YNL232W	TMA19	P35691	167 aa	Known RBP	4.54	□□□□□ -1.68
CSL4	YNL232W	FZO1	P38297	855 aa		4.54	□□□□□ -1.68
CSL4	YNL232W	IPT1	P38954	527 aa		4.54	□□□□□ -1.68
CSL4	YNL232W	THO1	P40040	218 aa	Known RBP	4.54	□□□□□ -1.68
CSL4	YNL232W	BUD8	P41698	603 aa		4.54	□□□□□ -1.68
CSL4	YNL232W	YFL015C	P43578	164 aa		4.54	□□□□□ -1.68
CSL4	YNL232W	PHB2	P50085	310 aa		4.54	□□□□□ -1.68
CSL4	YNL232W	PMT5	P52867	743 aa		4.54	□□□□□ -1.68
CSL4	YNL232W	PGA1	P53896	198 aa		4.54	□□□□□ -1.68
CSL4	YNL232W	DIA1	P54005	336 aa		4.54	□□□□□ -1.68
CSL4	YNL232W	ELP6	Q04868	273 aa		4.54	□□□□□ -1.68
CSL4	YNL232W	SCW10	Q04951	389 aa		4.54	□□□□□ -1.68
CSL4	YNL232W	LSO2	Q3E772	92 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms