RNA–Protein interactions for RNA: YMR139W

RIM11, Transcript of Protein kinase, yeast

Gene RIM11, Length 1,113 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM11	YMR139W	RPL40A	P0CH08	128 aa	Known RBP	3.13	□□□□□ -1.91
RIM11	YMR139W	RPL40B	P0CH09	128 aa	Known RBP	3.13	□□□□□ -1.91
RIM11	YMR139W	ZRC1	P20107	442 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	EHD3	P28817	500 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	PMT2	P31382	759 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	VMA5	P31412	392 aa	Known RBP	3.13	□□□□□ -1.91
RIM11	YMR139W	ERG3	P32353	365 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	VAM7	P32912	316 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	FRM2	P37261	193 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	UMP1	P38293	148 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	OM14	P38325	134 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	SLZ1	P40167	298 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	CFD1	P40558	293 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	PNC1	P53184	216 aa	Known RBP	3.13	□□□□□ -1.91
RIM11	YMR139W	YGR126W	P53274	230 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	HHO1	P53551	258 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	RNH201	P53942	307 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	EST3	Q03096	181 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	YML018C	Q03730	393 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	YDR248C	Q03786	193 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	CTS2	Q06350	511 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	RRT7	Q07829	113 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	POM34	Q12445	299 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	ERP4	Q12450	207 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	PAR32	Q12515	295 aa	Known RBP	3.13	□□□□□ -1.91
RIM11	YMR139W	PCC1	Q3E833	88 aa		3.13	□□□□□ -1.91
RIM11	YMR139W	IPP1	P00817	287 aa	Known RBP	3.12	□□□□□ -1.91
RIM11	YMR139W	SCEI	P03882	235 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	ARO3	P14843	370 aa	Known RBP	3.12	□□□□□ -1.91
RIM11	YMR139W	CDC39	P25655	2108 aa	Known RBP	3.12	□□□□□ -1.91
RIM11	YMR139W	RFA3	P26755	122 aa	Known RBP	3.12	□□□□□ -1.91
RIM11	YMR139W	AFG1	P32317	509 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	MCM10	P32354	571 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	AGA2	P32781	87 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	YBL010C	P32788	280 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	YKL162C	P36052	402 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	LNP1	P38878	278 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	YHR210C	P38893	341 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	YER010C	P40011	234 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	YIL024C	P40543	189 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	LCL3	P53153	274 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	FMP41	P53889	259 aa	Known RBP	3.12	□□□□□ -1.91
RIM11	YMR139W	YDR102C	Q03864	110 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	RTT103	Q05543	409 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	BER1	Q06688	274 aa	Known RBP	3.12	□□□□□ -1.91
RIM11	YMR139W	SDO1	Q07953	250 aa	Known RBP	3.12	□□□□□ -1.91
RIM11	YMR139W	HNT3	Q08702	217 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	RDL2	Q08742	149 aa	Known RBP	3.12	□□□□□ -1.91
RIM11	YMR139W	SCP1	Q08873	200 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	VAM3	Q12241	283 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	CRC1	Q12289	327 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	SNU23	Q12368	194 aa	Predicted RBP	3.12	□□□□□ -1.91
RIM11	YMR139W	YLR146W-A	Q2V2P1	62 aa		3.12	□□□□□ -1.91
RIM11	YMR139W	POL2	P21951	2222 aa	Known RBP	3.11	□□□□□ -1.91
RIM11	YMR139W	YAL064W-B	O13512	126 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	MES1	P00958	751 aa	Known RBP	3.11	□□□□□ -1.91
RIM11	YMR139W	QCR2	P07257	368 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	NAM2	P11325	894 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	CDC26	P14724	124 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	IFM1	P25038	676 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	COS9	P36034	407 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	APD1	P38281	316 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	PRS3	P38689	320 aa	Known RBP	3.11	□□□□□ -1.91
RIM11	YMR139W	IKI1	P38874	309 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	GPI16	P38875	610 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	EMC5	P40540	141 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	AGX1	P43567	385 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	CTK2	P46962	323 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	UFD1	P53044	361 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	PKP2	P53170	491 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	YGR026W	P53217	278 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	BSC5	P53755	489 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	ALG9	P53868	555 aa	Known RBP	3.11	□□□□□ -1.91
RIM11	YMR139W	APJ1	P53940	528 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	YML053C	Q04978	212 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	NIP7	Q08962	181 aa	Known RBP	3.11	□□□□□ -1.91
RIM11	YMR139W	FCF2	Q12035	217 aa	Predicted RBP	3.11	□□□□□ -1.91
RIM11	YMR139W	TGS1	Q12052	315 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	ISA2	Q12425	185 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	YIL046W-A	Q3E7Z4	54 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	YHR214C-E	Q8TGK0	99 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	ISN1	Q99312	450 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	UBA3	Q99344	299 aa		3.11	□□□□□ -1.91
RIM11	YMR139W	YMR084W	A2P2R3	262 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	COX1	P00401	534 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	GAL1	P04385	528 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	CDC36	P06100	191 aa	Predicted RBP	3.1	□□□□□ -1.91
RIM11	YMR139W	SPO7	P18410	259 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	MIR1	P23641	311 aa	Known RBP	3.1	□□□□□ -1.91
RIM11	YMR139W	PCL1	P24867	279 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	MSK1	P32048	576 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	DAL3	P32459	195 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	CDS1	P38221	457 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	FIG1	P38224	298 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	SHG1	P38337	142 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	FLO5	P38894	1075 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	PGD1	P40356	397 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	POG1	P40473	351 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	MRX5	P47007	382 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	NIT2	P47016	307 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 91.5 ms