RNA–Protein interactions for RNA: YMR014W

BUD22, Transcript of Protein required for rRNA maturation and ribosomal subunit biogenesis, yeast

Gene BUD22, Length 1,560 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD22	YMR014W	YPR117W	Q06116	2489 aa		4.25	□□□□□ -1.73
BUD22	YMR014W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
BUD22	YMR014W	TPI1	P00942	248 aa	Known RBP	4.24	□□□□□ -1.73
BUD22	YMR014W	MES1	P00958	751 aa	Known RBP	4.24	□□□□□ -1.73
BUD22	YMR014W	RFA1	P22336	621 aa	Known RBP	4.24	□□□□□ -1.73
BUD22	YMR014W	MIR1	P23641	311 aa	Known RBP	4.24	□□□□□ -1.73
BUD22	YMR014W	UBS1	P38290	277 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	PRM5	P40476	318 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	YIR035C	P40579	254 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	AGX1	P43567	385 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	CTK2	P46962	323 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	NIT2	P47016	307 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	NSA1	P53136	463 aa	Predicted RBP	4.24	□□□□□ -1.73
BUD22	YMR014W	OKP1	P53298	406 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	HHO1	P53551	258 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	MRPL19	P53875	158 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	ODC1	Q03028	310 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	SDC1	Q03323	175 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	YDR286C	Q05530	114 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	RTT103	Q05543	409 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	YPD1	Q07688	167 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	GRC3	Q07845	632 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	RFU1	Q08003	200 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	FCF2	Q12035	217 aa	Predicted RBP	4.24	□□□□□ -1.73
BUD22	YMR014W	YIL046W-A	Q3E7Z4	54 aa		4.24	□□□□□ -1.73
BUD22	YMR014W	RPL30	P14120	105 aa	Known RBP	4.23	□□□□□ -1.73
BUD22	YMR014W	PEX4	P29340	183 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	YBL010C	P32788	280 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	GPI16	P38875	610 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	SHO1	P40073	367 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	POG1	P40473	351 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	XBP1	P40489	647 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	YJL016W	P47072	561 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	HOL1	P53389	586 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	INN1	P53901	409 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	APJ1	P53940	528 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	GPI15	P53961	229 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	YCL001W-A	P87012	153 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	SRP1	Q02821	542 aa	Known RBP	4.23	□□□□□ -1.73
BUD22	YMR014W	MRPS17	Q03246	237 aa	Predicted RBP	4.23	□□□□□ -1.73
BUD22	YMR014W	BER1	Q06688	274 aa	Known RBP	4.23	□□□□□ -1.73
BUD22	YMR014W	ZEO1	Q08245	113 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	EAF3	Q12432	401 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	YLR146W-A	Q2V2P1	62 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	VMA9	Q3E7B6	73 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	SGA1	P08019	549 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	YFR010W-A	P0C5N0	62 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	SED4	P25365	1065 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	DEG1	P31115	442 aa	Known RBP	4.23	□□□□□ -1.73
BUD22	YMR014W	COS9	P36034	407 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	YKL162C	P36052	402 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	ECM31	P38122	312 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	FAT1	P38225	669 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
BUD22	YMR014W	IKI1	P38874	309 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	EMC5	P40540	141 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	YIL024C	P40543	189 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	RPA34	P47006	233 aa	Predicted RBP	4.23	□□□□□ -1.73
BUD22	YMR014W	GWT1	P47026	490 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	YJR011C	P47086	261 aa	Predicted RBP	4.23	□□□□□ -1.73
BUD22	YMR014W	HAM1	P47119	197 aa	Known RBP	4.23	□□□□□ -1.73
BUD22	YMR014W	SNN1	P48232	102 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	YGL117W	P53133	265 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	PKP2	P53170	491 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	YDR102C	Q03864	110 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	ERP1	Q05359	219 aa	Known RBP	4.23	□□□□□ -1.73
BUD22	YMR014W	MDM30	Q05930	598 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	YDL086W	Q07505	273 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	ERP4	Q12450	207 aa		4.23	□□□□□ -1.73
BUD22	YMR014W	CDC28	P00546	298 aa	Known RBP	4.22	□□□□□ -1.73
BUD22	YMR014W	TIP1	P27654	210 aa	Predicted RBP	4.22	□□□□□ -1.73
BUD22	YMR014W	SOF1	P33750	489 aa	Known RBP	4.22	□□□□□ -1.73
BUD22	YMR014W	ARC40	P38328	384 aa	Known RBP	4.22	□□□□□ -1.73
BUD22	YMR014W	UME6	P39001	836 aa		4.22	□□□□□ -1.73
BUD22	YMR014W	SPC25	P40014	221 aa		4.22	□□□□□ -1.73
BUD22	YMR014W	YJR111C	P47148	283 aa	Known RBP	4.22	□□□□□ -1.73
BUD22	YMR014W	SSN8	P47821	323 aa		4.22	□□□□□ -1.73
BUD22	YMR014W	UBP8	P50102	471 aa		4.22	□□□□□ -1.73
BUD22	YMR014W	FMP41	P53889	259 aa	Known RBP	4.22	□□□□□ -1.73
BUD22	YMR014W	ATG21	Q02887	496 aa		4.22	□□□□□ -1.73
BUD22	YMR014W	TRS23	Q03784	219 aa		4.22	□□□□□ -1.73
BUD22	YMR014W	THI74	Q04083	370 aa		4.22	□□□□□ -1.73
BUD22	YMR014W	YDR391C	Q04170	232 aa		4.22	□□□□□ -1.73
BUD22	YMR014W	YPL272C	Q08984	517 aa		4.22	□□□□□ -1.73
BUD22	YMR014W	YLR365W	Q7LIF2	110 aa		4.22	□□□□□ -1.73
BUD22	YMR014W	HBN1	Q96VH4	193 aa		4.22	□□□□□ -1.73
BUD22	YMR014W	IPP1	P00817	287 aa	Known RBP	4.21	□□□□□ -1.74
BUD22	YMR014W	CBP6	P07253	162 aa	Predicted RBP	4.21	□□□□□ -1.74
BUD22	YMR014W	CKA1	P15790	372 aa		4.21	□□□□□ -1.74
BUD22	YMR014W	MSK1	P32048	576 aa		4.21	□□□□□ -1.74
BUD22	YMR014W	ACP1	P32463	125 aa		4.21	□□□□□ -1.74
BUD22	YMR014W	VAM7	P32912	316 aa		4.21	□□□□□ -1.74
BUD22	YMR014W	MRPL39	P36533	70 aa		4.21	□□□□□ -1.74
BUD22	YMR014W	ERV15	P38312	142 aa		4.21	□□□□□ -1.74
BUD22	YMR014W	YBR292C	P38357	123 aa		4.21	□□□□□ -1.74
BUD22	YMR014W	YEA6	P39953	335 aa		4.21	□□□□□ -1.74
BUD22	YMR014W	CCS1	P40202	249 aa	Known RBP	4.21	□□□□□ -1.74
BUD22	YMR014W	YIL029C	P40538	142 aa		4.21	□□□□□ -1.74
BUD22	YMR014W	ECO1	P43605	281 aa		4.21	□□□□□ -1.74
BUD22	YMR014W	DUG1	P43616	481 aa	Known RBP	4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms