RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeast

Gene BER1, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BER1	YLR412W	YLR126C	Q12288	251 aa		0.98	□□□□□ -2.25
BER1	YLR412W	QCR8	P08525	94 aa		0.97	□□□□□ -2.25
BER1	YLR412W	GPA2	P10823	449 aa		0.97	□□□□□ -2.25
BER1	YLR412W	YKL075C	P36083	450 aa		0.97	□□□□□ -2.25
BER1	YLR412W	NUP57	P48837	541 aa		0.97	□□□□□ -2.25
BER1	YLR412W	YML096W	Q04489	525 aa		0.97	□□□□□ -2.25
BER1	YLR412W	SSQ1	Q05931	657 aa	Predicted RBP	0.97	□□□□□ -2.25
BER1	YLR412W	RIO1	Q12196	484 aa	Known RBP	0.97	□□□□□ -2.25
BER1	YLR412W	FZF1	P32805	299 aa		0.96	□□□□□ -2.26
BER1	YLR412W	RIB1	P38066	345 aa		0.96	□□□□□ -2.26
BER1	YLR412W	ICE2	P40499	491 aa		0.96	□□□□□ -2.26
BER1	YLR412W	BOL2	P53082	120 aa		0.96	□□□□□ -2.26
BER1	YLR412W	TRM12	Q04235	462 aa		0.96	□□□□□ -2.26
BER1	YLR412W	SPG3	Q04398	127 aa	Predicted RBP	0.96	□□□□□ -2.26
BER1	YLR412W	RPL27B	P0C2H7	136 aa	Known RBP	0.95	□□□□□ -2.26
BER1	YLR412W	RIB7	P33312	244 aa		0.95	□□□□□ -2.26
BER1	YLR412W	YNL217W	P40152	326 aa		0.95	□□□□□ -2.26
BER1	YLR412W	PGD1	P40356	397 aa		0.95	□□□□□ -2.26
BER1	YLR412W	YRB2	P40517	327 aa		0.95	□□□□□ -2.26
BER1	YLR412W	KAP95	Q06142	861 aa	Known RBP	0.95	□□□□□ -2.26
BER1	YLR412W	PSF1	Q12488	208 aa		0.95	□□□□□ -2.26
BER1	YLR412W	YPR170W-B	P0C5R9	85 aa		0.94	□□□□□ -2.26
BER1	YLR412W	TCD1	P38756	429 aa		0.94	□□□□□ -2.26
BER1	YLR412W	RSM25	P40496	264 aa		0.94	□□□□□ -2.26
BER1	YLR412W	HOC1	P47124	396 aa		0.94	□□□□□ -2.26
BER1	YLR412W	ABF2	Q02486	183 aa		0.94	□□□□□ -2.26
BER1	YLR412W	VPS21	P36017	210 aa	Known RBP	0.93	□□□□□ -2.26
BER1	YLR412W	BNA6	P43619	295 aa		0.93	□□□□□ -2.26
BER1	YLR412W	GPI8	P49018	411 aa		0.93	□□□□□ -2.26
BER1	YLR412W	AIF1	P52923	378 aa		0.93	□□□□□ -2.26
BER1	YLR412W	CYR1	P08678	2026 aa	Known RBP	0.93	□□□□□ -2.26
BER1	YLR412W	RPT5	P33297	434 aa	Known RBP	0.92	□□□□□ -2.26
BER1	YLR412W	GAA1	P39012	614 aa		0.92	□□□□□ -2.26
BER1	YLR412W	PEX17	P40155	199 aa		0.92	□□□□□ -2.26
BER1	YLR412W	RRP36	Q12481	300 aa	Predicted RBP	0.92	□□□□□ -2.26
BER1	YLR412W	CPA1	P07258	411 aa	Known RBP	0.91	□□□□□ -2.26
BER1	YLR412W	TMA19	P35691	167 aa	Known RBP	0.91	□□□□□ -2.26
BER1	YLR412W	MPA43	P53583	542 aa	Predicted RBP	0.91	□□□□□ -2.26
BER1	YLR412W	YNL010W	P53981	241 aa	Known RBP	0.91	□□□□□ -2.26
BER1	YLR412W	YMD8	Q03697	442 aa		0.91	□□□□□ -2.26
BER1	YLR412W	PAM18	Q07914	168 aa		0.91	□□□□□ -2.26
BER1	YLR412W	VAR1	P02381	398 aa		0.9	□□□□□ -2.27
BER1	YLR412W	REP2	P03872	296 aa		0.9	□□□□□ -2.27
BER1	YLR412W	IRC22	P40006	225 aa		0.9	□□□□□ -2.27
BER1	YLR412W	YJR149W	P47177	404 aa		0.9	□□□□□ -2.27
BER1	YLR412W	DOC1	P53068	250 aa		0.9	□□□□□ -2.27
BER1	YLR412W	YNR077C	P53758	84 aa		0.9	□□□□□ -2.27
BER1	YLR412W	YNL134C	P53912	376 aa	Known RBP	0.9	□□□□□ -2.27
BER1	YLR412W	RRT8	Q08219	342 aa		0.9	□□□□□ -2.27
BER1	YLR412W	YPL162C	Q12042	273 aa		0.9	□□□□□ -2.27
BER1	YLR412W	ATG31	Q12421	196 aa		0.9	□□□□□ -2.27
BER1	YLR412W	MET5	P47169	1442 aa		0.89	□□□□□ -2.27
BER1	YLR412W	MRPS28	P21771	286 aa		0.89	□□□□□ -2.27
BER1	YLR412W	SRB4	P32569	687 aa		0.89	□□□□□ -2.27
BER1	YLR412W	URA8	P38627	578 aa	Predicted RBP	0.89	□□□□□ -2.27
BER1	YLR412W	MCM22	P47167	239 aa		0.89	□□□□□ -2.27
BER1	YLR412W	TRM9	P49957	279 aa		0.89	□□□□□ -2.27
BER1	YLR412W	SAY1	P53324	424 aa		0.89	□□□□□ -2.27
BER1	YLR412W	MRPL50	P53724	139 aa		0.89	□□□□□ -2.27
BER1	YLR412W	UBC7	Q02159	165 aa		0.89	□□□□□ -2.27
BER1	YLR412W	ANT1	Q06497	328 aa		0.89	□□□□□ -2.27
BER1	YLR412W	PDR18	P53756	1333 aa		0.89	□□□□□ -2.27
BER1	YLR412W	ATG22	P25568	528 aa		0.88	□□□□□ -2.27
BER1	YLR412W	YET1	P35723	206 aa		0.88	□□□□□ -2.27
BER1	YLR412W	DOG2	P38773	246 aa		0.88	□□□□□ -2.27
BER1	YLR412W	YER076C	P40049	302 aa		0.88	□□□□□ -2.27
BER1	YLR412W	SNZ1	Q03148	297 aa		0.88	□□□□□ -2.27
BER1	YLR412W	LPP1	Q04396	274 aa		0.88	□□□□□ -2.27
BER1	YLR412W	KRE28	Q04431	385 aa		0.88	□□□□□ -2.27
BER1	YLR412W	YLR156W	P0CE96	114 aa		0.87	□□□□□ -2.27
BER1	YLR412W	YLR159W	P0CE97	114 aa		0.87	□□□□□ -2.27
BER1	YLR412W	YLR161W	P0CE98	114 aa		0.87	□□□□□ -2.27
BER1	YLR412W	MRPL25	P23369	157 aa		0.87	□□□□□ -2.27
BER1	YLR412W	YUH1	P35127	236 aa		0.87	□□□□□ -2.27
BER1	YLR412W	CUE1	P38428	203 aa		0.87	□□□□□ -2.27
BER1	YLR412W	RPL37A	P49166	88 aa	Known RBP	0.87	□□□□□ -2.27
BER1	YLR412W	DID2	P69771	204 aa		0.87	□□□□□ -2.27
BER1	YLR412W	YLR173W	Q06247	608 aa		0.87	□□□□□ -2.27
BER1	YLR412W	NSA1	P53136	463 aa	Predicted RBP	0.86	□□□□□ -2.27
BER1	YLR412W	YML108W	Q03759	105 aa		0.86	□□□□□ -2.27
BER1	YLR412W	MSB2	P32334	1306 aa		0.86	□□□□□ -2.27
BER1	YLR412W	NTF2	P33331	125 aa	Known RBP	0.85	□□□□□ -2.27
BER1	YLR412W	LDB7	P38210	180 aa		0.85	□□□□□ -2.27
BER1	YLR412W	UMP1	P38293	148 aa		0.85	□□□□□ -2.27
BER1	YLR412W	POP4	P38336	279 aa		0.85	□□□□□ -2.27
BER1	YLR412W	ERJ5	P43613	295 aa	Predicted RBP	0.85	□□□□□ -2.27
BER1	YLR412W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.85	□□□□□ -2.27	not detected
BER1	YLR412W	LSO2	Q3E772	92 aa	Known RBP	0.85	□□□□□ -2.27
BER1	YLR412W	TUS1	Q06412	1307 aa		0.85	□□□□□ -2.27
BER1	YLR412W	BCY1	P07278	416 aa	Known RBP	0.84	□□□□□ -2.27
BER1	YLR412W	CDC10	P25342	322 aa	Known RBP	0.84	□□□□□ -2.27
BER1	YLR412W	TFC1	P32367	649 aa		0.84	□□□□□ -2.27
BER1	YLR412W	MRPL28	P36527	147 aa		0.84	□□□□□ -2.27
BER1	YLR412W	MRPL17	P36528	281 aa		0.84	□□□□□ -2.27
BER1	YLR412W	RIO2	P40160	425 aa	Known RBP	0.84	□□□□□ -2.27
BER1	YLR412W	POP3	P53833	195 aa	Predicted RBP	0.84	□□□□□ -2.27
BER1	YLR412W	GAS3	Q03655	524 aa		0.84	□□□□□ -2.27
BER1	YLR412W	YDR248C	Q03786	193 aa		0.84	□□□□□ -2.27
BER1	YLR412W	DRS2	P39524	1355 aa		0.83	□□□□□ -2.28
BER1	YLR412W	RPO26	P20435	155 aa		0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 104.1 ms