RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C FLO9P39712 1322 aa1.09□□□□□ -2.24
AFB1YLR040C CDC8P00572 216 aa1.08□□□□□ -2.24
AFB1YLR040C FPR1P20081 114 aaKnown RBP1.08□□□□□ -2.24
AFB1YLR040C VPS21P36017 210 aaKnown RBP1.08□□□□□ -2.24
AFB1YLR040C RIB1P38066 345 aa1.08□□□□□ -2.24
AFB1YLR040C BNA6P43619 295 aa1.08□□□□□ -2.24
AFB1YLR040C TRM12Q04235 462 aa1.08□□□□□ -2.24
AFB1YLR040C SPG3Q04398 127 aaPredicted RBP1.08□□□□□ -2.24
AFB1YLR040C YML096WQ04489 525 aa1.08□□□□□ -2.24
AFB1YLR040C YUH1P35127 236 aa1.07□□□□□ -2.24
AFB1YLR040C UPS2P35200 230 aa1.07□□□□□ -2.24
AFB1YLR040C TIR3P40552 269 aa1.07□□□□□ -2.24
AFB1YLR040C RPL33BP41056 107 aaKnown RBP1.07□□□□□ -2.24
AFB1YLR040C ILM1P47155 203 aa1.07□□□□□ -2.24
AFB1YLR040C PAM18Q07914 168 aa1.07□□□□□ -2.24
AFB1YLR040C PSF1Q12488 208 aa1.07□□□□□ -2.24
AFB1YLR040C MEI4P29467 408 aa1.06□□□□□ -2.24
AFB1YLR040C YRB2P40517 327 aa1.06□□□□□ -2.24
AFB1YLR040C YJR149WP47177 404 aa1.06□□□□□ -2.24
AFB1YLR040C BOL2P53082 120 aa1.06□□□□□ -2.24
AFB1YLR040C ERV29P53337 310 aa1.06□□□□□ -2.24
AFB1YLR040C SSQ1Q05931 657 aaPredicted RBP1.06□□□□□ -2.24
AFB1YLR040C RPL27BP0C2H7 136 aaKnown RBP1.05□□□□□ -2.24
AFB1YLR040C PEX17P40155 199 aa1.05□□□□□ -2.24
AFB1YLR040C RPL13BP40212 199 aaKnown RBP1.05□□□□□ -2.24
AFB1YLR040C ICE2P40499 491 aa1.05□□□□□ -2.24
AFB1YLR040C ABF2Q02486 183 aa1.05□□□□□ -2.24
AFB1YLR040C MZM1Q03429 123 aaPredicted RBP1.05□□□□□ -2.24
AFB1YLR040C YLR173WQ06247 608 aa1.05□□□□□ -2.24
AFB1YLR040C RPL13AQ12690 199 aaPredicted RBP1.05□□□□□ -2.24
AFB1YLR040C YPR170W-BP0C5R9 85 aa1.04□□□□□ -2.24
AFB1YLR040C URA8P38627 578 aaPredicted RBP1.04□□□□□ -2.24
AFB1YLR040C IRC22P40006 225 aa1.04□□□□□ -2.24
AFB1YLR040C PGD1P40356 397 aa1.04□□□□□ -2.24
AFB1YLR040C RSM25P40496 264 aa1.04□□□□□ -2.24
AFB1YLR040C TRM9P49957 279 aa1.04□□□□□ -2.24
AFB1YLR040C MRPL50P53724 139 aa1.04□□□□□ -2.24
AFB1YLR040C YNL010WP53981 241 aaKnown RBP1.04□□□□□ -2.24
AFB1YLR040C KRE28Q04431 385 aa1.04□□□□□ -2.24
AFB1YLR040C REP2P03872 296 aa1.03□□□□□ -2.24
AFB1YLR040C RPO26P20435 155 aa1.03□□□□□ -2.24
AFB1YLR040C SRB4P32569 687 aa1.03□□□□□ -2.24
AFB1YLR040C FZF1P32805 299 aa1.03□□□□□ -2.24
AFB1YLR040C NTF2P33331 125 aaKnown RBP1.03□□□□□ -2.24
AFB1YLR040C LDB7P38210 180 aa1.03□□□□□ -2.24
AFB1YLR040C YNL217WP40152 326 aa1.03□□□□□ -2.24
AFB1YLR040C MCM22P47167 239 aa1.03□□□□□ -2.24
AFB1YLR040C AIF1P52923 378 aa1.02□□□□□ -2.25
AFB1YLR040C YNR077CP53758 84 aa1.02□□□□□ -2.25
AFB1YLR040C QCR8P08525 94 aa1.01□□□□□ -2.25
AFB1YLR040C GPA2P10823 449 aa1.01□□□□□ -2.25
AFB1YLR040C MRPL25P23369 157 aa1.01□□□□□ -2.25
AFB1YLR040C GAA1P39012 614 aa1.01□□□□□ -2.25
AFB1YLR040C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
AFB1YLR040C SRL4Q03085 281 aa1.01□□□□□ -2.25
AFB1YLR040C YMD8Q03697 442 aa1.01□□□□□ -2.25
AFB1YLR040C INO80P53115 1489 aa1□□□□□ -2.25
AFB1YLR040C YLR156WP0CE96 114 aa1□□□□□ -2.25
AFB1YLR040C YLR159WP0CE97 114 aa1□□□□□ -2.25
AFB1YLR040C YLR161WP0CE98 114 aa1□□□□□ -2.25
AFB1YLR040C CDC10P25342 322 aaKnown RBP1□□□□□ -2.25
AFB1YLR040C SRY1P36007 326 aa1□□□□□ -2.25
AFB1YLR040C CUE1P38428 203 aa1□□□□□ -2.25
AFB1YLR040C DOG2P38773 246 aa1□□□□□ -2.25
AFB1YLR040C NUP84P52891 726 aa1□□□□□ -2.25
AFB1YLR040C DOC1P53068 250 aa1□□□□□ -2.25
AFB1YLR040C DID2P69771 204 aa1□□□□□ -2.25
AFB1YLR040C LPP1Q04396 274 aa1□□□□□ -2.25
AFB1YLR040C PDR18P53756 1333 aa0.99□□□□□ -2.25
AFB1YLR040C BCY1P07278 416 aaKnown RBP0.99□□□□□ -2.25
AFB1YLR040C NSA1P53136 463 aaPredicted RBP0.99□□□□□ -2.25
AFB1YLR040C RIO1Q12196 484 aaKnown RBP0.99□□□□□ -2.25
AFB1YLR040C MATALPHA1P0CY06 175 aa0.98□□□□□ -2.25
AFB1YLR040C HMLALPHA1P0CY07 175 aa0.98□□□□□ -2.25
AFB1YLR040C FMC1P40491 155 aa0.98□□□□□ -2.25
AFB1YLR040C SNZ1Q03148 297 aa0.98□□□□□ -2.25
AFB1YLR040C MED4Q12343 284 aa0.98□□□□□ -2.25
AFB1YLR040C DRS2P39524 1355 aa0.97□□□□□ -2.25
AFB1YLR040C SPT3P06844 337 aa0.97□□□□□ -2.25
AFB1YLR040C MRPS28P21771 286 aa0.97□□□□□ -2.25
AFB1YLR040C ATG22P25568 528 aa0.97□□□□□ -2.25
AFB1YLR040C TMA19P35691 167 aaKnown RBP0.97□□□□□ -2.25
AFB1YLR040C YET1P35723 206 aa0.97□□□□□ -2.25
AFB1YLR040C POP4P38336 279 aa0.97□□□□□ -2.25
AFB1YLR040C TCD1P38756 429 aa0.97□□□□□ -2.25
AFB1YLR040C NUP57P48837 541 aa0.97□□□□□ -2.25
AFB1YLR040C CPA1P07258 411 aaKnown RBP0.96□□□□□ -2.26
AFB1YLR040C URA6P15700 204 aa0.96□□□□□ -2.26
AFB1YLR040C YCR016WP25617 290 aaKnown RBP0.96□□□□□ -2.26
AFB1YLR040C MRPL28P36527 147 aa0.96□□□□□ -2.26
AFB1YLR040C MRPL17P36528 281 aa0.96□□□□□ -2.26
AFB1YLR040C UMP1P38293 148 aa0.96□□□□□ -2.26
AFB1YLR040C RPC17P47076 161 aa0.96□□□□□ -2.26
AFB1YLR040C LIA1P47120 325 aaKnown RBP0.96□□□□□ -2.26
AFB1YLR040C MPA43P53583 542 aaPredicted RBP0.96□□□□□ -2.26
AFB1YLR040C PET117Q02771 107 aa0.96□□□□□ -2.26
AFB1YLR040C SWP1Q02795 286 aa0.96□□□□□ -2.26
AFB1YLR040C YLR283WQ05867 314 aa0.96□□□□□ -2.26
AFB1YLR040C ANT1Q06497 328 aa0.96□□□□□ -2.26
AFB1YLR040C LSO2Q3E772 92 aaKnown RBP0.96□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 49 ms