RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W YPL247CQ12523 523 aa2.05□□□□□ -2.08
TRM2YKR056W DPM1P14020 267 aaKnown RBP2.04□□□□□ -2.08
TRM2YKR056W UBC8P28263 218 aa2.04□□□□□ -2.08
TRM2YKR056W GPI18P38211 433 aa2.04□□□□□ -2.08
TRM2YKR056W DER1P38307 211 aa2.04□□□□□ -2.08
TRM2YKR056W SEO1P39709 593 aa2.04□□□□□ -2.08
TRM2YKR056W EDC3P39998 551 aaKnown RBP2.04□□□□□ -2.08
TRM2YKR056W ICE2P40499 491 aa2.04□□□□□ -2.08
TRM2YKR056W YPI1P43587 155 aa2.04□□□□□ -2.08
TRM2YKR056W NIP7Q08962 181 aaKnown RBP2.04□□□□□ -2.08
TRM2YKR056W NOT5Q12514 560 aaPredicted RBP2.04□□□□□ -2.08
TRM2YKR056W IGO2Q9P305 131 aa2.04□□□□□ -2.08
TRM2YKR056W CDC7P06243 507 aa2.03□□□□□ -2.08
TRM2YKR056W BMH1P29311 267 aaKnown RBP2.03□□□□□ -2.08
TRM2YKR056W PRY2P36110 329 aa2.03□□□□□ -2.08
TRM2YKR056W PDS1P40316 373 aaPredicted RBP2.03□□□□□ -2.08
TRM2YKR056W MEP2P41948 499 aa2.03□□□□□ -2.08
TRM2YKR056W IMP4P53941 290 aaKnown RBP2.03□□□□□ -2.08
TRM2YKR056W DID2P69771 204 aa2.03□□□□□ -2.08
TRM2YKR056W NUP49Q02199 472 aa2.03□□□□□ -2.08
TRM2YKR056W MRPS16Q02608 121 aa2.03□□□□□ -2.08
TRM2YKR056W YDL211CQ12121 372 aa2.03□□□□□ -2.08
TRM2YKR056W NSL1Q12143 216 aa2.03□□□□□ -2.08
TRM2YKR056W SMT3Q12306 101 aaKnown RBP2.03□□□□□ -2.08
TRM2YKR056W RDI1Q12434 202 aa2.03□□□□□ -2.08
TRM2YKR056W PET20Q99373 253 aa2.03□□□□□ -2.08
TRM2YKR056W YLR462WO13556 202 aa2.03□□□□□ -2.08
TRM2YKR056W IPP1P00817 287 aaKnown RBP2.03□□□□□ -2.08
TRM2YKR056W FLO11P08640 1367 aa2.03□□□□□ -2.08
TRM2YKR056W EPT1P22140 391 aa2.03□□□□□ -2.08
TRM2YKR056W SEC22P22214 214 aa2.03□□□□□ -2.08
TRM2YKR056W CNB1P25296 175 aa2.03□□□□□ -2.08
TRM2YKR056W TRX3P25372 127 aa2.03□□□□□ -2.08
TRM2YKR056W MGT1P26188 188 aa2.03□□□□□ -2.08
TRM2YKR056W YEL075CP39972 122 aa2.03□□□□□ -2.08
TRM2YKR056W MIG2P53035 382 aa2.03□□□□□ -2.08
TRM2YKR056W FLC3P53121 802 aa2.03□□□□□ -2.08
TRM2YKR056W NQM1P53228 333 aaPredicted RBP2.03□□□□□ -2.08
TRM2YKR056W HST4P53688 370 aa2.03□□□□□ -2.08
TRM2YKR056W COG5P53951 403 aa2.03□□□□□ -2.08
TRM2YKR056W HSK3P69852 69 aa2.03□□□□□ -2.08
TRM2YKR056W TVP15Q03860 143 aa2.03□□□□□ -2.08
TRM2YKR056W RRP17Q04031 235 aaPredicted RBP2.03□□□□□ -2.08
TRM2YKR056W TSA2Q04120 196 aa2.03□□□□□ -2.08
TRM2YKR056W PEX12Q04370 399 aa2.03□□□□□ -2.08
TRM2YKR056W NNT1Q05874 261 aa2.03□□□□□ -2.08
TRM2YKR056W PTM1P32857 523 aa2.02□□□□□ -2.09
TRM2YKR056W TRM7P38238 310 aaKnown RBP2.02□□□□□ -2.09
TRM2YKR056W RPF1P38805 295 aaKnown RBP2.02□□□□□ -2.09
TRM2YKR056W AST2P39945 430 aaKnown RBP2.02□□□□□ -2.09
TRM2YKR056W YIL054WP40524 105 aa2.02□□□□□ -2.09
TRM2YKR056W UFE1P41834 346 aa2.02□□□□□ -2.09
TRM2YKR056W RPE1P46969 238 aa2.02□□□□□ -2.09
TRM2YKR056W PRM8P53174 237 aa2.02□□□□□ -2.09
TRM2YKR056W CAX4P53223 239 aa2.02□□□□□ -2.09
TRM2YKR056W YNL010WP53981 241 aaKnown RBP2.02□□□□□ -2.09
TRM2YKR056W GRH1Q04410 372 aaKnown RBP2.02□□□□□ -2.09
TRM2YKR056W INM2Q05533 292 aa2.02□□□□□ -2.09
TRM2YKR056W PIN3Q06449 215 aa2.02□□□□□ -2.09
TRM2YKR056W YLR050CQ12155 161 aaKnown RBP2.02□□□□□ -2.09
TRM2YKR056W RPS24AP0CX31 135 aaKnown RBP2.01□□□□□ -2.09
TRM2YKR056W RPS24BP0CX32 135 aaKnown RBP2.01□□□□□ -2.09
TRM2YKR056W YCR023CP25351 611 aa2.01□□□□□ -2.09
TRM2YKR056W SEC17P32602 292 aa2.01□□□□□ -2.09
TRM2YKR056W UTP30P36144 274 aaKnown RBP2.01□□□□□ -2.09
TRM2YKR056W NVJ1P38881 321 aa2.01□□□□□ -2.09
TRM2YKR056W TEM1P38987 245 aa2.01□□□□□ -2.09
TRM2YKR056W RSM10Q03201 203 aa2.01□□□□□ -2.09
TRM2YKR056W LPP1Q04396 274 aa2.01□□□□□ -2.09
TRM2YKR056W YLR036CQ07986 203 aa2.01□□□□□ -2.09
TRM2YKR056W YPL264CQ08980 353 aa2.01□□□□□ -2.09
TRM2YKR056W TDA8Q6B2U8 126 aa2.01□□□□□ -2.09
TRM2YKR056W PAN1P32521 1480 aa2.01□□□□□ -2.09
TRM2YKR056W SGA1P08019 549 aa2.01□□□□□ -2.09
TRM2YKR056W RPS28BP0C0X0 67 aaKnown RBP2.01□□□□□ -2.09
TRM2YKR056W LDB16P25587 256 aa2.01□□□□□ -2.09
TRM2YKR056W MDH3P32419 343 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
TRM2YKR056W ERG24P32462 438 aaKnown RBP2.01□□□□□ -2.09
TRM2YKR056W YPT52P36018 234 aaKnown RBP2.01□□□□□ -2.09
TRM2YKR056W FMP23P38231 175 aa2.01□□□□□ -2.09
TRM2YKR056W SSH1P38353 490 aaKnown RBP2.01□□□□□ -2.09
TRM2YKR056W SPL2P38839 148 aa2.01□□□□□ -2.09
TRM2YKR056W LSM4P40070 187 aaKnown RBP2.01□□□□□ -2.09
TRM2YKR056W YFH7P43591 353 aa2.01□□□□□ -2.09
TRM2YKR056W LSM1P47017 172 aaKnown RBP2.01□□□□□ -2.09
TRM2YKR056W ARP3P47117 449 aaKnown RBP2.01□□□□□ -2.09
TRM2YKR056W COQ5P49017 307 aa2.01□□□□□ -2.09
TRM2YKR056W GIS2P53849 153 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
TRM2YKR056W SMD1Q02260 146 aaPredicted RBP2.01□□□□□ -2.09
TRM2YKR056W ABF2Q02486 183 aa2.01□□□□□ -2.09
TRM2YKR056W FCF1Q05498 189 aaPredicted RBP2.01□□□□□ -2.09
TRM2YKR056W YTH1Q06102 208 aaPredicted RBP2.01□□□□□ -2.09
TRM2YKR056W RPS28AQ3E7X9 67 aaPredicted RBP2.01□□□□□ -2.09
TRM2YKR056W YFR032C-BQ8TGU2 87 aa2.01□□□□□ -2.09
TRM2YKR056W HTL1Q9URQ5 78 aa2.01□□□□□ -2.09
TRM2YKR056W CBP6P07253 162 aaPredicted RBP2□□□□□ -2.09
TRM2YKR056W AHC2P25649 128 aa2□□□□□ -2.09
TRM2YKR056W SRP102P36057 244 aaPredicted RBP2□□□□□ -2.09
TRM2YKR056W DOG2P38773 246 aa2□□□□□ -2.09
TRM2YKR056W BDH1P39714 382 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms