RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeastyeast

Gene SWD2, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD2YKL018W TY2B-OR1Q12113 1770 aa2.7□□□□□ -1.98
SWD2YKL018W TY2B-DR1Q12472 1770 aa2.7□□□□□ -1.98
SWD2YKL018W TY2B-OR2Q12501 1770 aa2.7□□□□□ -1.98
SWD2YKL018W CDC8P00572 216 aa2.7□□□□□ -1.98
SWD2YKL018W RPL28P02406 149 aaKnown RBP2.7□□□□□ -1.98
SWD2YKL018W SPT3P06844 337 aa2.7□□□□□ -1.98
SWD2YKL018W YCR102CP25608 368 aa2.7□□□□□ -1.98
SWD2YKL018W BUD23P25627 275 aaPredicted RBP2.7□□□□□ -1.98
SWD2YKL018W MRPL3P36516 390 aa2.7□□□□□ -1.98
SWD2YKL018W YCR087C-AP37263 153 aa2.7□□□□□ -1.98
SWD2YKL018W MRX3P38172 270 aa2.7□□□□□ -1.98
SWD2YKL018W HEK2P38199 381 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
SWD2YKL018W MBA1P38300 278 aa2.7□□□□□ -1.98
SWD2YKL018W FMP32P43557 207 aa2.7□□□□□ -1.98
SWD2YKL018W PGU1P47180 361 aa2.7□□□□□ -1.98
SWD2YKL018W MAL13P53338 473 aa2.7□□□□□ -1.98
SWD2YKL018W COG5P53951 403 aa2.7□□□□□ -1.98
SWD2YKL018W ABF2Q02486 183 aa2.7□□□□□ -1.98
SWD2YKL018W DYN2Q02647 92 aa2.7□□□□□ -1.98
SWD2YKL018W DML1Q03652 475 aa2.7□□□□□ -1.98
SWD2YKL018W TRM10Q12400 293 aa2.7□□□□□ -1.98
SWD2YKL018W YAL067W-AQ8TGK6 75 aa2.7□□□□□ -1.98
SWD2YKL018W FLO11P08640 1367 aa2.7□□□□□ -1.98
SWD2YKL018W TRM3Q07527 1436 aa2.69□□□□□ -1.98
SWD2YKL018W CUP2P15315 225 aa2.69□□□□□ -1.98
SWD2YKL018W IDP1P21954 428 aaKnown RBP2.69□□□□□ -1.98
SWD2YKL018W YCR025CP25352 136 aa2.69□□□□□ -1.98
SWD2YKL018W QRI5P32344 111 aa2.69□□□□□ -1.98
SWD2YKL018W ALK2P32789 676 aaPredicted RBP2.69□□□□□ -1.98
SWD2YKL018W CAT2P32796 670 aaKnown RBP2.69□□□□□ -1.98
SWD2YKL018W GSP1P32835 219 aaKnown RBP2.69□□□□□ -1.98
SWD2YKL018W GSP2P32836 220 aaKnown RBP2.69□□□□□ -1.98
SWD2YKL018W RPS1AP33442 255 aaKnown RBP2.69□□□□□ -1.98
SWD2YKL018W ZRT3P34240 503 aa2.69□□□□□ -1.98
SWD2YKL018W HPM1P40481 377 aa2.69□□□□□ -1.98
SWD2YKL018W AVT7P40501 490 aa2.69□□□□□ -1.98
SWD2YKL018W YIL054WP40524 105 aa2.69□□□□□ -1.98
SWD2YKL018W YFL064CP43540 174 aa2.69□□□□□ -1.98
SWD2YKL018W MIC26P50087 233 aa2.69□□□□□ -1.98
SWD2YKL018W YGL118CP53132 145 aa2.69□□□□□ -1.98
SWD2YKL018W MMS2P53152 137 aa2.69□□□□□ -1.98
SWD2YKL018W ALG13P53178 202 aa2.69□□□□□ -1.98
SWD2YKL018W NRK1P53915 240 aa2.69□□□□□ -1.98
SWD2YKL018W ASI3P53983 676 aa2.69□□□□□ -1.98
SWD2YKL018W YMR279CQ03263 540 aa2.69□□□□□ -1.98
SWD2YKL018W YNG1Q08465 219 aa2.69□□□□□ -1.98
SWD2YKL018W USB1Q12208 290 aaKnown RBP2.69□□□□□ -1.98
SWD2YKL018W DCN1Q12395 269 aa2.69□□□□□ -1.98
SWD2YKL018W AGC1Q12482 902 aa2.69□□□□□ -1.98
SWD2YKL018W YPL119C-AQ3E751 87 aa2.69□□□□□ -1.98
SWD2YKL018W VTH1P40438 1549 aa2.68□□□□□ -1.98
SWD2YKL018W VTH2P40890 1549 aa2.68□□□□□ -1.98
SWD2YKL018W ATG15P25641 520 aa2.68□□□□□ -1.98
SWD2YKL018W SPS18P32572 300 aa2.68□□□□□ -1.98
SWD2YKL018W SGE1P33335 543 aa2.68□□□□□ -1.98
SWD2YKL018W YBR242WP38331 238 aa2.68□□□□□ -1.98
SWD2YKL018W RMD6P39975 231 aa2.68□□□□□ -1.98
SWD2YKL018W FCY21P40039 528 aa2.68□□□□□ -1.98
SWD2YKL018W YER076CP40049 302 aa2.68□□□□□ -1.98
SWD2YKL018W COG3P40094 801 aa2.68□□□□□ -1.98
SWD2YKL018W RRG9P40156 214 aa2.68□□□□□ -1.98
SWD2YKL018W SER33P40510 469 aa2.68□□□□□ -1.98
SWD2YKL018W MRPL49P40858 161 aaPredicted RBP2.68□□□□□ -1.98
SWD2YKL018W MIC19P43594 170 aa2.68□□□□□ -1.98
SWD2YKL018W YJR079WP47126 109 aa2.68□□□□□ -1.98
SWD2YKL018W USE1P53146 245 aa2.68□□□□□ -1.98
SWD2YKL018W JAC1P53193 184 aa2.68□□□□□ -1.98
SWD2YKL018W YNL095CP53932 642 aa2.68□□□□□ -1.98
SWD2YKL018W YPL113CQ02961 396 aa2.68□□□□□ -1.98
SWD2YKL018W AIM34Q03673 198 aa2.68□□□□□ -1.98
SWD2YKL018W RUB1Q03919 77 aa2.68□□□□□ -1.98
SWD2YKL018W GRX8Q05926 109 aa2.68□□□□□ -1.98
SWD2YKL018W NEJ1Q06148 342 aa2.68□□□□□ -1.98
SWD2YKL018W FRQ1Q06389 190 aa2.68□□□□□ -1.98
SWD2YKL018W FYV7Q12247 151 aa2.68□□□□□ -1.98
SWD2YKL018W SIR4P11978 1358 aa2.68□□□□□ -1.98
SWD2YKL018W NUP157P40064 1391 aaKnown RBP2.68□□□□□ -1.98
SWD2YKL018W IQG1Q12280 1495 aa2.68□□□□□ -1.98
SWD2YKL018W PDR15Q04182 1529 aaKnown RBP2.68□□□□□ -1.98
SWD2YKL018W PDR10P51533 1564 aa2.67□□□□□ -1.98
SWD2YKL018W MYO4P32492 1471 aa2.67□□□□□ -1.98
SWD2YKL018W CBP6P07253 162 aaPredicted RBP2.67□□□□□ -1.98
SWD2YKL018W SUI1P32911 108 aaKnown RBP2.67□□□□□ -1.98
SWD2YKL018W FMP23P38231 175 aa2.67□□□□□ -1.98
SWD2YKL018W CUE1P38428 203 aa2.67□□□□□ -1.98
SWD2YKL018W PRS3P38689 320 aaKnown RBP2.67□□□□□ -1.98
SWD2YKL018W GRE3P38715 327 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
SWD2YKL018W SMB1P40018 196 aaKnown RBP2.67□□□□□ -1.98
SWD2YKL018W EDC2P40023 145 aaPredicted RBP2.67□□□□□ -1.98
SWD2YKL018W RGI1P40043 161 aaPredicted RBP2.67□□□□□ -1.98
SWD2YKL018W PRE6P40303 254 aaKnown RBP2.67□□□□□ -1.98
SWD2YKL018W YJL016WP47072 561 aa2.67□□□□□ -1.98
SWD2YKL018W BRR6P53062 197 aa2.67□□□□□ -1.98
SWD2YKL018W COS6P53344 381 aa2.67□□□□□ -1.98
SWD2YKL018W ARL3Q02804 198 aa2.67□□□□□ -1.98
SWD2YKL018W YML096WQ04489 525 aa2.67□□□□□ -1.98
SWD2YKL018W YMR315WQ04869 349 aaKnown RBP2.67□□□□□ -1.98
SWD2YKL018W NOC4Q06512 552 aaPredicted RBP2.67□□□□□ -1.98
SWD2YKL018W LDB18Q07887 179 aa2.67□□□□□ -1.98
SWD2YKL018W YOR283WQ12040 230 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms