RNA–Protein interactions for RNA: YJL104W

PAM16, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM16, Length 450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM16	YJL104W	YEL043W	P32618	956 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	PDC2	P32896	925 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	ARC19	P33204	171 aa	Known RBP	0.71	□□□□□ -2.3
PAM16	YJL104W	SRP102	P36057	244 aa	Predicted RBP	0.71	□□□□□ -2.3
PAM16	YJL104W	YKL071W	P36086	256 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	VMA22	P38784	181 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	RRP4	P38792	359 aa	Known RBP	0.71	□□□□□ -2.3
PAM16	YJL104W	CHL4	P38907	458 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	YHB1	P39676	399 aa	Known RBP	0.71	□□□□□ -2.3
PAM16	YJL104W	LCP5	P40079	357 aa	Predicted RBP	0.71	□□□□□ -2.3
PAM16	YJL104W	RFC2	P40348	353 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	YJL218W	P40892	196 aa	Known RBP	0.71	□□□□□ -2.3
PAM16	YJL104W	TFG2	P41896	400 aa	Predicted RBP	0.71	□□□□□ -2.3
PAM16	YJL104W	AGP3	P43548	558 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	AGX1	P43567	385 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	HMS2	P47175	358 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	ERG25	P53045	309 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	PXR1	P53335	271 aa	Predicted RBP	0.71	□□□□□ -2.3
PAM16	YJL104W	ERV29	P53337	310 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	YNR048W	P53740	393 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	NRK1	P53915	240 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	TDA1	Q03533	586 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	DML1	Q03652	475 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	YHP1	Q04116	353 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	UTP15	Q04305	513 aa	Known RBP	0.71	□□□□□ -2.3
PAM16	YJL104W	YDR114C	Q04597	100 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	YLR283W	Q05867	314 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	VPS38	Q05919	439 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	SPO77	Q06134	477 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	RRP9	Q06506	573 aa	Known RBP	0.71	□□□□□ -2.3
PAM16	YJL104W	ASR1	Q06834	288 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	YDL114W	Q07530	308 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	RFU1	Q08003	200 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	LCL2	Q08045	131 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	HRT1	Q08273	121 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	RKM1	Q08961	583 aa	Predicted RBP	0.71	□□□□□ -2.3
PAM16	YJL104W	YPL247C	Q12523	523 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	DFM1	Q12743	341 aa	Known RBP	0.71	□□□□□ -2.3
PAM16	YJL104W	YCR075W-A	Q3E830	75 aa		0.71	□□□□□ -2.3
PAM16	YJL104W	DDP1	Q99321	188 aa	Known RBP	0.71	□□□□□ -2.3
PAM16	YJL104W	TPK3	P05986	398 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	SPT3	P06844	337 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	MRP13	P12686	339 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	SNF6	P18888	332 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	MRPL25	P23369	157 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	CLB3	P24870	427 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	TIP1	P27654	210 aa	Predicted RBP	0.7	□□□□□ -2.3
PAM16	YJL104W	RAD14	P28519	371 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	VPH2	P32341	215 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	ASF2	P32448	525 aa	Predicted RBP	0.7	□□□□□ -2.3
PAM16	YJL104W	ZUO1	P32527	433 aa	Known RBP	0.7	□□□□□ -2.3
PAM16	YJL104W	TIM12	P32830	109 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	MSN4	P33749	630 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	UPS2	P35200	230 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	NRG2	P38082	220 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	FZO1	P38297	855 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	STP2	P38704	541 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	MLH1	P38920	769 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	RMD6	P39975	231 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	YNL208W	P40159	199 aa	Known RBP	0.7	□□□□□ -2.3
PAM16	YJL104W	COA1	P40452	197 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	LOH1	P47055	219 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	SNX4	P47057	423 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	NAS6	P50086	228 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	YGL262W	P53054	175 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	MMS2	P53152	137 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	FYV6	P53913	173 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	RNH201	P53942	307 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	RPL21A	Q02753	160 aa	Known RBP	0.7	□□□□□ -2.3
PAM16	YJL104W	RRN5	Q02983	363 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	YMR099C	Q03161	297 aa	Known RBP	0.7	□□□□□ -2.3
PAM16	YJL104W	YMR114C	Q04471	368 aa	Known RBP	0.7	□□□□□ -2.3
PAM16	YJL104W	SNO4	Q04902	237 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	FSH2	Q05015	223 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	PEX10	Q05568	337 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	ATG39	Q06159	398 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	TIM18	Q08749	192 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	HSP33	Q08914	237 aa	Known RBP	0.7	□□□□□ -2.3
PAM16	YJL104W	HSP32	Q08992	237 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	DAS2	Q12084	232 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	YLR126C	Q12288	251 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	JLP1	Q12358	412 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	YOR343C	Q12484	108 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	MHT1	Q12525	324 aa		0.7	□□□□□ -2.3
PAM16	YJL104W	RPL21B	Q12672	160 aa	Known RBP	0.7	□□□□□ -2.3
PAM16	YJL104W	CDC28	P00546	298 aa	Known RBP	0.69	□□□□□ -2.3
PAM16	YJL104W	SNF4	P12904	322 aa		0.69	□□□□□ -2.3
PAM16	YJL104W	CUP2	P15315	225 aa		0.69	□□□□□ -2.3
PAM16	YJL104W	SPO12	P17123	173 aa		0.69	□□□□□ -2.3
PAM16	YJL104W	YPK2	P18961	677 aa		0.69	□□□□□ -2.3
PAM16	YJL104W	HYP2	P23301	157 aa	Known RBP	0.69	□□□□□ -2.3
PAM16	YJL104W	OCA4	P25366	362 aa		0.69	□□□□□ -2.3
PAM16	YJL104W	PTP2	P29461	750 aa		0.69	□□□□□ -2.3
PAM16	YJL104W	YPS1	P32329	569 aa		0.69	□□□□□ -2.3
PAM16	YJL104W	AGA2	P32781	87 aa		0.69	□□□□□ -2.3
PAM16	YJL104W	SRY1	P36007	326 aa		0.69	□□□□□ -2.3
PAM16	YJL104W	CBT1	P36038	271 aa	Predicted RBP	0.69	□□□□□ -2.3
PAM16	YJL104W	SWD2	P36104	329 aa	Predicted RBP	0.69	□□□□□ -2.3
PAM16	YJL104W	SKG1	P36169	355 aa		0.69	□□□□□ -2.3
PAM16	YJL104W	ADH5	P38113	351 aa	Known RBP	0.69	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms