RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	NEJ1	Q06148	342 aa		0.81	□□□□□ -2.28
SCW11	YGL028C	HEM25	Q07534	307 aa		0.81	□□□□□ -2.28
SCW11	YGL028C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.81	□□□□□ -2.28	not detected
SCW11	YGL028C	BOL1	Q3E793	110 aa		0.81	□□□□□ -2.28
SCW11	YGL028C	THP2	O13539	261 aa	Known RBP	0.8	□□□□□ -2.28
SCW11	YGL028C	REP2	P03872	296 aa		0.8	□□□□□ -2.28
SCW11	YGL028C	MSW1	P04803	379 aa		0.8	□□□□□ -2.28
SCW11	YGL028C	CDC10	P25342	322 aa	Known RBP	0.8	□□□□□ -2.28
SCW11	YGL028C	MEI4	P29467	408 aa		0.8	□□□□□ -2.28
SCW11	YGL028C	OAC1	P32332	324 aa		0.8	□□□□□ -2.28
SCW11	YGL028C	VMA6	P32366	345 aa	Known RBP	0.8	□□□□□ -2.28
SCW11	YGL028C	PHO88	P38264	188 aa	Predicted RBP	0.8	□□□□□ -2.28
SCW11	YGL028C	RTR1	P40084	226 aa	Predicted RBP	0.8	□□□□□ -2.28
SCW11	YGL028C	YKE4	P40544	346 aa		0.8	□□□□□ -2.28
SCW11	YGL028C	OTU1	P43558	301 aa		0.8	□□□□□ -2.28
SCW11	YGL028C	MIC26	P50087	233 aa		0.8	□□□□□ -2.28
SCW11	YGL028C	NSA1	P53136	463 aa	Predicted RBP	0.8	□□□□□ -2.28
SCW11	YGL028C	YML096W	Q04489	525 aa		0.8	□□□□□ -2.28
SCW11	YGL028C	ATO3	Q12359	275 aa		0.8	□□□□□ -2.28
SCW11	YGL028C	PSF1	Q12488	208 aa		0.8	□□□□□ -2.28
SCW11	YGL028C	CDC7	P06243	507 aa		0.79	□□□□□ -2.28
SCW11	YGL028C	DDI2	P0CH63	225 aa		0.79	□□□□□ -2.28
SCW11	YGL028C	DDI3	P0CH64	225 aa		0.79	□□□□□ -2.28
SCW11	YGL028C	FCY2	P17064	533 aa		0.79	□□□□□ -2.28
SCW11	YGL028C	SIP3	P38717	1229 aa		0.79	□□□□□ -2.28
SCW11	YGL028C	PRE6	P40303	254 aa	Known RBP	0.79	□□□□□ -2.28
SCW11	YGL028C	YGR219W	P53307	113 aa		0.79	□□□□□ -2.28
SCW11	YGL028C	YNL010W	P53981	241 aa	Known RBP	0.79	□□□□□ -2.28
SCW11	YGL028C	TRM12	Q04235	462 aa		0.79	□□□□□ -2.28
SCW11	YGL028C	USB1	Q12208	290 aa	Known RBP	0.79	□□□□□ -2.28
SCW11	YGL028C	SEY1	Q99287	776 aa		0.79	□□□□□ -2.28
SCW11	YGL028C	UBR2	Q07963	1872 aa		0.79	□□□□□ -2.28
SCW11	YGL028C	FAS1	P07149	2051 aa	Known RBP	0.79	□□□□□ -2.28
SCW11	YGL028C	CDC8	P00572	216 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	URA6	P15700	204 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	YMR31	P19955	123 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	RPL24B	P24000	155 aa	Known RBP	0.78	□□□□□ -2.28
SCW11	YGL028C	ERV15	P38312	142 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	YHR022C	P38763	256 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	SVP26	P38869	228 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	YER135C	P40082	130 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	COX15	P40086	486 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	PEP8	P40335	379 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	BMT5	P40493	336 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	YIL001W	P40560	513 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	GCN20	P43535	752 aa	Known RBP	0.78	□□□□□ -2.28
SCW11	YGL028C	CIS3	P47001	227 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	BRR6	P53062	197 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	YNR062C	P53748	327 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	CYT2	Q00873	224 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	YML108W	Q03759	105 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	LPP1	Q04396	274 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	SPG3	Q04398	127 aa	Predicted RBP	0.78	□□□□□ -2.28
SCW11	YGL028C	CDC123	Q05791	360 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	SSQ1	Q05931	657 aa	Predicted RBP	0.78	□□□□□ -2.28
SCW11	YGL028C	DCN1	Q12395	269 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	YKL183C-A	Q3E765	70 aa		0.78	□□□□□ -2.28
SCW11	YGL028C	LSO2	Q3E772	92 aa	Known RBP	0.78	□□□□□ -2.28
SCW11	YGL028C	YPR170W-B	P0C5R9	85 aa		0.78	□□□□□ -2.29
SCW11	YGL028C	PET9	P18239	318 aa	Known RBP	0.78	□□□□□ -2.29
SCW11	YGL028C	PBN1	P25580	416 aa		0.78	□□□□□ -2.29
SCW11	YGL028C	PPA2	P28239	310 aa		0.78	□□□□□ -2.29
SCW11	YGL028C	TCA17	P32613	152 aa		0.78	□□□□□ -2.29
SCW11	YGL028C	SSO1	P32867	290 aa		0.78	□□□□□ -2.29
SCW11	YGL028C	BMH2	P34730	273 aa	Known RBP	0.78	□□□□□ -2.29
SCW11	YGL028C	MIC12	P38341	106 aa		0.78	□□□□□ -2.29
SCW11	YGL028C	DOG2	P38773	246 aa		0.78	□□□□□ -2.29
SCW11	YGL028C	DSE2	P38844	325 aa		0.78	□□□□□ -2.29
SCW11	YGL028C	MSS2	P40990	351 aa		0.78	□□□□□ -2.29
SCW11	YGL028C	YRB1	P41920	201 aa	Known RBP	0.78	□□□□□ -2.29
SCW11	YGL028C	ALG13	P53178	202 aa		0.78	□□□□□ -2.29
SCW11	YGL028C	FYV6	P53913	173 aa		0.78	□□□□□ -2.29
SCW11	YGL028C	TIM11	P81449	96 aa	Predicted RBP	0.78	□□□□□ -2.29
SCW11	YGL028C	RNH1	Q04740	348 aa		0.78	□□□□□ -2.29
SCW11	YGL028C	NCB2	Q92317	146 aa		0.78	□□□□□ -2.29
SCW11	YGL028C	CDC28	P00546	298 aa	Known RBP	0.77	□□□□□ -2.29
SCW11	YGL028C	SEC4	P07560	215 aa	Known RBP	0.77	□□□□□ -2.29
SCW11	YGL028C	YBR121C-A	P0C5L4	52 aa		0.77	□□□□□ -2.29
SCW11	YGL028C	SEC17	P32602	292 aa		0.77	□□□□□ -2.29
SCW11	YGL028C	PRX1	P34227	261 aa	Known RBP	0.77	□□□□□ -2.29
SCW11	YGL028C	ERG28	P40030	148 aa		0.77	□□□□□ -2.29
SCW11	YGL028C	LSM4	P40070	187 aa	Known RBP	0.77	□□□□□ -2.29
SCW11	YGL028C	PGD1	P40356	397 aa		0.77	□□□□□ -2.29
SCW11	YGL028C	ICE2	P40499	491 aa		0.77	□□□□□ -2.29
SCW11	YGL028C	FAR7	P43592	221 aa		0.77	□□□□□ -2.29
SCW11	YGL028C	YFR054C	P43622	192 aa		0.77	□□□□□ -2.29
SCW11	YGL028C	NUP57	P48837	541 aa		0.77	□□□□□ -2.29
SCW11	YGL028C	AIF1	P52923	378 aa		0.77	□□□□□ -2.29
SCW11	YGL028C	ERG25	P53045	309 aa		0.77	□□□□□ -2.29
SCW11	YGL028C	MGA1	P53050	456 aa		0.77	□□□□□ -2.29
SCW11	YGL028C	DOC1	P53068	250 aa		0.77	□□□□□ -2.29
SCW11	YGL028C	BOL2	P53082	120 aa		0.77	□□□□□ -2.29
SCW11	YGL028C	PRM8	P53174	237 aa		0.77	□□□□□ -2.29
SCW11	YGL028C	YDR248C	Q03786	193 aa		0.77	□□□□□ -2.29
SCW11	YGL028C	DRS2	P39524	1355 aa		0.76	□□□□□ -2.29
SCW11	YGL028C	YDR157W	A0A023PZE8	133 aa		0.76	□□□□□ -2.29
SCW11	YGL028C	ARG80	P07249	177 aa		0.76	□□□□□ -2.29
SCW11	YGL028C	RPL27B	P0C2H7	136 aa	Known RBP	0.76	□□□□□ -2.29
SCW11	YGL028C	YLR156W	P0CE96	114 aa		0.76	□□□□□ -2.29
SCW11	YGL028C	YLR159W	P0CE97	114 aa		0.76	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms