RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W NSA1P53136 463 aaPredicted RBP1.93□□□□□ -2.1
RPN9YDR427W ERV29P53337 310 aa1.93□□□□□ -2.1
RPN9YDR427W YML096WQ04489 525 aa1.93□□□□□ -2.1
RPN9YDR427W RPL9AP05738 191 aaKnown RBP1.92□□□□□ -2.1
RPN9YDR427W PEX4P29340 183 aa1.92□□□□□ -2.1
RPN9YDR427W SRY1P36007 326 aa1.92□□□□□ -2.1
RPN9YDR427W YBR063CP38083 404 aa1.92□□□□□ -2.1
RPN9YDR427W MIC12P38341 106 aa1.92□□□□□ -2.1
RPN9YDR427W COX15P40086 486 aa1.92□□□□□ -2.1
RPN9YDR427W RSM25P40496 264 aa1.92□□□□□ -2.1
RPN9YDR427W RPL9BP51401 191 aaKnown RBP1.92□□□□□ -2.1
RPN9YDR427W ABF2Q02486 183 aa1.92□□□□□ -2.1
RPN9YDR427W MRPS8Q03799 155 aa1.92□□□□□ -2.1
RPN9YDR427W ARR2Q06597 130 aa1.92□□□□□ -2.1
RPN9YDR427W ATO3Q12359 275 aa1.92□□□□□ -2.1
RPN9YDR427W FBA1P14540 359 aaKnown RBP1.91□□□□□ -2.1
RPN9YDR427W YMR31P19955 123 aa1.91□□□□□ -2.1
RPN9YDR427W PPA2P28239 310 aa1.91□□□□□ -2.1
RPN9YDR427W MDH3P32419 343 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
RPN9YDR427W YFR054CP43622 192 aa1.91□□□□□ -2.1
RPN9YDR427W DID2P69771 204 aa1.91□□□□□ -2.1
RPN9YDR427W RNH1Q04740 348 aa1.91□□□□□ -2.1
RPN9YDR427W CDC123Q05791 360 aa1.91□□□□□ -2.1
RPN9YDR427W SSQ1Q05931 657 aaPredicted RBP1.91□□□□□ -2.1
RPN9YDR427W NEJ1Q06148 342 aa1.91□□□□□ -2.1
RPN9YDR427W HEM25Q07534 307 aa1.91□□□□□ -2.1
RPN9YDR427W SEY1Q99287 776 aa1.91□□□□□ -2.1
RPN9YDR427W KOG1P38873 1557 aa1.9□□□□□ -2.1
RPN9YDR427W MSW1P04803 379 aa1.9□□□□□ -2.11
RPN9YDR427W URA6P15700 204 aa1.9□□□□□ -2.11
RPN9YDR427W SSO1P32867 290 aa1.9□□□□□ -2.11
RPN9YDR427W RTC3P38804 111 aaPredicted RBP1.9□□□□□ -2.11
RPN9YDR427W YHR180WP38868 163 aa1.9□□□□□ -2.11
RPN9YDR427W GCN20P43535 752 aaKnown RBP1.9□□□□□ -2.11
RPN9YDR427W YGR219WP53307 113 aa1.9□□□□□ -2.11
RPN9YDR427W FYV6P53913 173 aa1.9□□□□□ -2.11
RPN9YDR427W YNL010WP53981 241 aaKnown RBP1.9□□□□□ -2.11
RPN9YDR427W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
RPN9YDR427W RUD3Q12234 484 aaKnown RBP1.9□□□□□ -2.11
RPN9YDR427W ATG2P53855 1592 aa1.89□□□□□ -2.11
RPN9YDR427W CDC7P06243 507 aa1.89□□□□□ -2.11
RPN9YDR427W PBN1P25580 416 aa1.89□□□□□ -2.11
RPN9YDR427W IRC22P40006 225 aa1.89□□□□□ -2.11
RPN9YDR427W LSM4P40070 187 aaKnown RBP1.89□□□□□ -2.11
RPN9YDR427W PEP8P40335 379 aa1.89□□□□□ -2.11
RPN9YDR427W YIL001WP40560 513 aa1.89□□□□□ -2.11
RPN9YDR427W MSS2P40990 351 aa1.89□□□□□ -2.11
RPN9YDR427W ALG13P53178 202 aa1.89□□□□□ -2.11
RPN9YDR427W TIM11P81449 96 aaPredicted RBP1.89□□□□□ -2.11
RPN9YDR427W YML108WQ03759 105 aa1.89□□□□□ -2.11
RPN9YDR427W YKL183C-AQ3E765 70 aa1.89□□□□□ -2.11
RPN9YDR427W LSO2Q3E772 92 aaKnown RBP1.89□□□□□ -2.11
RPN9YDR427W REV3P14284 1504 aa1.88□□□□□ -2.11
RPN9YDR427W CDC28P00546 298 aaKnown RBP1.88□□□□□ -2.11
RPN9YDR427W CDC8P00572 216 aa1.88□□□□□ -2.11
RPN9YDR427W NHP6BP11633 99 aaKnown RBP1.88□□□□□ -2.11
RPN9YDR427W OAC1P32332 324 aa1.88□□□□□ -2.11
RPN9YDR427W PHO88P38264 188 aaPredicted RBP1.88□□□□□ -2.11
RPN9YDR427W TCD1P38756 429 aa1.88□□□□□ -2.11
RPN9YDR427W PRM10P42946 383 aa1.88□□□□□ -2.11
RPN9YDR427W CIS3P47001 227 aa1.88□□□□□ -2.11
RPN9YDR427W BRR6P53062 197 aa1.88□□□□□ -2.11
RPN9YDR427W DCN1Q12395 269 aa1.88□□□□□ -2.11
RPN9YDR427W PSF1Q12488 208 aa1.88□□□□□ -2.11
RPN9YDR427W SSN2P38931 1420 aa1.88□□□□□ -2.11
RPN9YDR427W SPA2P23201 1466 aaKnown RBP1.88□□□□□ -2.11
RPN9YDR427W SIN3P22579 1536 aa1.87□□□□□ -2.11
RPN9YDR427W YBR121C-AP0C5L4 52 aa1.87□□□□□ -2.11
RPN9YDR427W ERV15P38312 142 aa1.87□□□□□ -2.11
RPN9YDR427W DOG2P38773 246 aa1.87□□□□□ -2.11
RPN9YDR427W ERG28P40030 148 aa1.87□□□□□ -2.11
RPN9YDR427W YRB1P41920 201 aaKnown RBP1.87□□□□□ -2.11
RPN9YDR427W NUP57P48837 541 aa1.87□□□□□ -2.11
RPN9YDR427W YMD8Q03697 442 aa1.87□□□□□ -2.11
RPN9YDR427W TRM12Q04235 462 aa1.87□□□□□ -2.11
RPN9YDR427W XRN1P22147 1528 aaKnown RBP1.86□□□□□ -2.11
RPN9YDR427W PEP1P32319 1579 aa1.86□□□□□ -2.11
RPN9YDR427W THO2P53552 1597 aaKnown RBP1.86□□□□□ -2.11
RPN9YDR427W SSK2P53599 1579 aa1.86□□□□□ -2.11
RPN9YDR427W ARG80P07249 177 aa1.86□□□□□ -2.11
RPN9YDR427W YPR170W-BP0C5R9 85 aa1.86□□□□□ -2.11
RPN9YDR427W YHR022CP38763 256 aa1.86□□□□□ -2.11
RPN9YDR427W YER135CP40082 130 aa1.86□□□□□ -2.11
RPN9YDR427W YKE4P40544 346 aa1.86□□□□□ -2.11
RPN9YDR427W MGA1P53050 456 aa1.86□□□□□ -2.11
RPN9YDR427W YNR062CP53748 327 aa1.86□□□□□ -2.11
RPN9YDR427W CYT2Q00873 224 aa1.86□□□□□ -2.11
RPN9YDR427W LPP1Q04396 274 aa1.86□□□□□ -2.11
RPN9YDR427W USB1Q12208 290 aaKnown RBP1.86□□□□□ -2.11
RPN9YDR427W NCB2Q92317 146 aa1.86□□□□□ -2.11
RPN9YDR427W ESP1Q03018 1630 aa1.86□□□□□ -2.11
RPN9YDR427W MDS3P53094 1487 aa1.86□□□□□ -2.11
RPN9YDR427W DRS2P39524 1355 aa1.85□□□□□ -2.11
RPN9YDR427W TY2B-LR1P0C2J3 1770 aa1.85□□□□□ -2.11
RPN9YDR427W TY2B-FP0CX63 1770 aa1.85□□□□□ -2.11
RPN9YDR427W TY2B-GR2P0CX64 1770 aa1.85□□□□□ -2.11
RPN9YDR427W TY2B-CP25384 1770 aa1.85□□□□□ -2.11
RPN9YDR427W TY2B-DR2Q03494 1770 aa1.85□□□□□ -2.11
RPN9YDR427W TY1B-DR1Q03855 1755 aa1.85□□□□□ -2.11
RPN9YDR427W TY2B-DR3Q07791 1770 aaKnown RBP1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms