RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W FAT1P38225 669 aa8.17□□□□□ -1.1
SED1YDR077W PRS2P38620 318 aaKnown RBP8.17□□□□□ -1.1
SED1YDR077W GPI16P38875 610 aa8.17□□□□□ -1.1
SED1YDR077W BMT5P40493 336 aa8.17□□□□□ -1.1
SED1YDR077W EGT2P42835 1041 aa8.17□□□□□ -1.1
SED1YDR077W HNT2P49775 206 aa8.17□□□□□ -1.1
SED1YDR077W UBC13P52490 153 aa8.17□□□□□ -1.1
SED1YDR077W YPL077CQ02831 240 aa8.17□□□□□ -1.1
SED1YDR077W RNH203Q12338 110 aa8.17□□□□□ -1.1
SED1YDR077W FMP16Q12497 93 aa8.17□□□□□ -1.1
SED1YDR077W IPP1P00817 287 aaKnown RBP8.16□□□□□ -1.1
SED1YDR077W SEN2P16658 377 aa8.16□□□□□ -1.1
SED1YDR077W MAK32P23060 363 aa8.16□□□□□ -1.1
SED1YDR077W MIR1P23641 311 aaKnown RBP8.16□□□□□ -1.1
SED1YDR077W TEL1P38110 2787 aa8.16□□□□□ -1.1
SED1YDR077W CCS1P40202 249 aaKnown RBP8.16□□□□□ -1.1
SED1YDR077W YIR035CP40579 254 aa8.16□□□□□ -1.1
SED1YDR077W YMR254CQ04838 102 aa8.16□□□□□ -1.1
SED1YDR077W NOC4Q06512 552 aaPredicted RBP8.16□□□□□ -1.1
SED1YDR077W GRC3Q07845 632 aa8.16□□□□□ -1.1
SED1YDR077W PRS5Q12265 496 aaKnown RBP8.16□□□□□ -1.1
SED1YDR077W BBP1Q12365 385 aa8.16□□□□□ -1.1
SED1YDR077W CKA1P15790 372 aa8.15□□□□□ -1.1
SED1YDR077W IRC24P40580 263 aa8.15□□□□□ -1.1
SED1YDR077W SOL1P50278 321 aa8.15□□□□□ -1.1
SED1YDR077W YPL067CQ02754 198 aa8.15□□□□□ -1.1
SED1YDR077W UPS1Q05776 175 aa8.15□□□□□ -1.1
SED1YDR077W RRP15Q06511 250 aaPredicted RBP8.15□□□□□ -1.1
SED1YDR077W ISU2Q12056 156 aa8.15□□□□□ -1.1
SED1YDR077W YLR365WQ7LIF2 110 aa8.15□□□□□ -1.1
SED1YDR077W ATG40Q99325 256 aa8.15□□□□□ -1.1
SED1YDR077W QCR2P07257 368 aa8.14□□□□□ -1.11
SED1YDR077W RPS23AP0CX29 145 aaKnown RBP8.14□□□□□ -1.11
SED1YDR077W RPS23BP0CX30 145 aa8.14□□□□□ -1.11
SED1YDR077W OLE1P21147 510 aaKnown RBP8.14□□□□□ -1.11
SED1YDR077W TIP1P27654 210 aaPredicted RBP8.14□□□□□ -1.11
SED1YDR077W IMP1P28627 190 aa8.14□□□□□ -1.11
SED1YDR077W MRP20P32387 263 aa8.14□□□□□ -1.11
SED1YDR077W LNP1P38878 278 aa8.14□□□□□ -1.11
SED1YDR077W TAF4P50105 388 aa8.14□□□□□ -1.11
SED1YDR077W SLX9P53251 210 aaPredicted RBP8.14□□□□□ -1.11
SED1YDR077W ACT1P60010 375 aaKnown RBP8.14□□□□□ -1.11
SED1YDR077W DID2P69771 204 aa8.14□□□□□ -1.11
SED1YDR077W NRG1Q03125 231 aa8.14□□□□□ -1.11
SED1YDR077W THI74Q04083 370 aa8.14□□□□□ -1.11
SED1YDR077W MPD1Q12404 318 aaKnown RBP8.14□□□□□ -1.11
SED1YDR077W TFC7Q12415 435 aa8.14□□□□□ -1.11
SED1YDR077W SEC22P22214 214 aa8.13□□□□□ -1.11
SED1YDR077W RPL13BP40212 199 aaKnown RBP8.13□□□□□ -1.11
SED1YDR077W RPA34P47006 233 aaPredicted RBP8.13□□□□□ -1.11
SED1YDR077W MEH1Q02205 184 aa8.13□□□□□ -1.11
SED1YDR077W API2Q04413 109 aa8.13□□□□□ -1.11
SED1YDR077W ANT1Q06497 328 aa8.13□□□□□ -1.11
SED1YDR077W AEP3Q12089 606 aa8.13□□□□□ -1.11
SED1YDR077W YCT1Q12235 531 aa8.13□□□□□ -1.11
SED1YDR077W RPL13AQ12690 199 aaPredicted RBP8.13□□□□□ -1.11
SED1YDR077W YJR112W-AQ3E743 109 aa8.13□□□□□ -1.11
SED1YDR077W DBP2P24783 546 aaKnown RBP8.12□□□□□ -1.11
SED1YDR077W PDC2P32896 925 aa8.12□□□□□ -1.11
SED1YDR077W SWD2P36104 329 aaPredicted RBP8.12□□□□□ -1.11
SED1YDR077W YBR220CP38318 560 aa8.12□□□□□ -1.11
SED1YDR077W YHL037CP38733 133 aa8.12□□□□□ -1.11
SED1YDR077W YFL051CP43552 160 aa8.12□□□□□ -1.11
SED1YDR077W PNC1P53184 216 aaKnown RBP8.12□□□□□ -1.11
SED1YDR077W TSA2Q04120 196 aa8.12□□□□□ -1.11
SED1YDR077W FCY22Q12119 530 aa8.12□□□□□ -1.11
SED1YDR077W WHI5Q12416 295 aa8.12□□□□□ -1.11
SED1YDR077W ISN1Q99312 450 aa8.12□□□□□ -1.11
SED1YDR077W YBR085C-AO43137 85 aa8.11□□□□□ -1.11
SED1YDR077W RPI1P23250 407 aaKnown RBP8.11□□□□□ -1.11
SED1YDR077W VMA3P25515 160 aa8.11□□□□□ -1.11
SED1YDR077W RPB7P34087 171 aa8.11□□□□□ -1.11
SED1YDR077W SWD3P38123 315 aa8.11□□□□□ -1.11
SED1YDR077W NTC20P38302 140 aaPredicted RBP8.11□□□□□ -1.11
SED1YDR077W PRM5P40476 318 aa8.11□□□□□ -1.11
SED1YDR077W TAD2P47058 250 aa8.11□□□□□ -1.11
SED1YDR077W YJR111CP47148 283 aaKnown RBP8.11□□□□□ -1.11
SED1YDR077W PKP2P53170 491 aa8.11□□□□□ -1.11
SED1YDR077W CRZ1P53968 678 aa8.11□□□□□ -1.11
SED1YDR077W RRT7Q07829 113 aa8.11□□□□□ -1.11
SED1YDR077W YLR146W-AQ2V2P1 62 aa8.11□□□□□ -1.11
SED1YDR077W FUS3P16892 353 aaKnown RBP8.1□□□□□ -1.11
SED1YDR077W POP2P39008 433 aa8.1□□□□□ -1.11
SED1YDR077W GCV3P39726 170 aaPredicted RBP8.1□□□□□ -1.11
SED1YDR077W UBC12P52491 188 aa8.1□□□□□ -1.11
SED1YDR077W YMR279CQ03263 540 aa8.1□□□□□ -1.11
SED1YDR077W MRL1Q06815 381 aa8.1□□□□□ -1.11
SED1YDR077W YOL029CQ08187 201 aa8.1□□□□□ -1.11
SED1YDR077W FRE8Q12209 686 aa8.1□□□□□ -1.11
SED1YDR077W YPR108W-AQ3E7B3 70 aa8.1□□□□□ -1.11
SED1YDR077W SSA3P09435 649 aaKnown RBP8.09□□□□□ -1.11
SED1YDR077W YML003WP0CF16 290 aa8.09□□□□□ -1.11
SED1YDR077W MNS1P32906 549 aa8.09□□□□□ -1.11
SED1YDR077W YUH1P35127 236 aa8.09□□□□□ -1.11
SED1YDR077W ERV15P38312 142 aa8.09□□□□□ -1.11
SED1YDR077W LSM12P38828 187 aaKnown RBP8.09□□□□□ -1.11
SED1YDR077W PAC2P39937 518 aa8.09□□□□□ -1.11
SED1YDR077W VPS28Q02767 242 aa8.09□□□□□ -1.11
SED1YDR077W DPB4Q04603 196 aaKnown RBP8.09□□□□□ -1.11
SED1YDR077W LIP2Q06005 328 aa8.09□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms