RNA–Protein interactions for RNA: YDL196W

YDL196W, Transcript of Dubious open reading frame, yeast

Gene YDL196W, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL196W	YDL196W	BXI1	P48558	297 aa		0.67	□□□□□ -2.3
YDL196W	YDL196W	RAD17	P48581	401 aa		0.67	□□□□□ -2.3
YDL196W	YDL196W	NUP57	P48837	541 aa		0.67	□□□□□ -2.3
YDL196W	YDL196W	PRM8	P53174	237 aa		0.67	□□□□□ -2.3
YDL196W	YDL196W	YDR248C	Q03786	193 aa		0.67	□□□□□ -2.3
YDL196W	YDL196W	YLR179C	Q06252	201 aa	Known RBP	0.67	□□□□□ -2.3
YDL196W	YDL196W	YLR030W	Q07967	263 aa		0.67	□□□□□ -2.3
YDL196W	YDL196W	YOR268C	Q08734	132 aa		0.67	□□□□□ -2.3
YDL196W	YDL196W	AKR2	Q12013	749 aa		0.67	□□□□□ -2.3
YDL196W	YDL196W	TPO4	Q12256	659 aa		0.67	□□□□□ -2.3
YDL196W	YDL196W	EMC6	Q12431	108 aa		0.67	□□□□□ -2.3
YDL196W	YDL196W	RPL25	P04456	142 aa	Known RBP	0.66	□□□□□ -2.3
YDL196W	YDL196W	MSW1	P04803	379 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	RPL27A	P0C2H6	136 aa	Known RBP	0.66	□□□□□ -2.3
YDL196W	YDL196W	RPL27B	P0C2H7	136 aa	Known RBP	0.66	□□□□□ -2.3
YDL196W	YDL196W	GCN3	P14741	305 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	SNF6	P18888	332 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	SCO1	P23833	295 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	ATG22	P25568	528 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	EHD3	P28817	500 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.66	□□□□□ -2.3	not detected
YDL196W	YDL196W	APS1	P35181	156 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	CBT1	P36038	271 aa	Predicted RBP	0.66	□□□□□ -2.3
YDL196W	YDL196W	MRPL28	P36527	147 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	SIP3	P38717	1229 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	IKI1	P38874	309 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	AST2	P39945	430 aa	Known RBP	0.66	□□□□□ -2.3
YDL196W	YDL196W	RMD6	P39975	231 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	ERG28	P40030	148 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	VTC1	P40046	129 aa	RIP-Chip data	0.66	□□□□□ -2.3	not detected
YDL196W	YDL196W	PEX17	P40155	199 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	PIR5	P46999	287 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	CIS3	P47001	227 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	ADO1	P47143	340 aa	Known RBP	0.66	□□□□□ -2.3
YDL196W	YDL196W	YJR149W	P47177	404 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	ERG25	P53045	309 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	YGL034C	P53186	121 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	YGR219W	P53307	113 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	ERV29	P53337	310 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	COS6	P53344	381 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	SSU72	P53538	206 aa	Predicted RBP	0.66	□□□□□ -2.3
YDL196W	YDL196W	CUS2	P53830	285 aa	Predicted RBP	0.66	□□□□□ -2.3
YDL196W	YDL196W	GIM3	P53900	129 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	SLM2	P53955	656 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	DAD3	P69850	94 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	RSM10	Q03201	203 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	MIX17	Q03667	156 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	NIP7	Q08962	181 aa	Known RBP	0.66	□□□□□ -2.3
YDL196W	YDL196W	GET4	Q12125	312 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	YRA1	Q12159	226 aa	Known RBP	0.66	□□□□□ -2.3
YDL196W	YDL196W	MDM32	Q12171	622 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	ATO3	Q12359	275 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	ADF1	Q2V2Q1	113 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	SIR4	P11978	1358 aa		0.66	□□□□□ -2.3
YDL196W	YDL196W	CDC8	P00572	216 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	HTB1	P02293	131 aa	Known RBP	0.65	□□□□□ -2.31
YDL196W	YDL196W	HTB2	P02294	131 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	CDC36	P06100	191 aa	Predicted RBP	0.65	□□□□□ -2.31
YDL196W	YDL196W	CDC33	P07260	213 aa	Known RBP	0.65	□□□□□ -2.31
YDL196W	YDL196W	YPR170W-B	P0C5R9	85 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	FBA1	P14540	359 aa	Known RBP	0.65	□□□□□ -2.31
YDL196W	YDL196W	MRPS28	P21771	286 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	PTM1	P32857	523 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	SNC2	P33328	115 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	PRX1	P34227	261 aa	Known RBP	0.65	□□□□□ -2.31
YDL196W	YDL196W	ECM33	P38248	429 aa	Known RBP	0.65	□□□□□ -2.31
YDL196W	YDL196W	ERV15	P38312	142 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	URA8	P38627	578 aa	Predicted RBP	0.65	□□□□□ -2.31
YDL196W	YDL196W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.65	□□□□□ -2.31	not detected
YDL196W	YDL196W	RTC3	P38804	111 aa	Predicted RBP	0.65	□□□□□ -2.31
YDL196W	YDL196W	YNL194C	P40169	301 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	PGD1	P40356	397 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	YKE4	P40544	346 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	CWC23	P52868	283 aa	Predicted RBP	0.65	□□□□□ -2.31
YDL196W	YDL196W	MGA1	P53050	456 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	ALG13	P53178	202 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	GET1	P53192	235 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	PDR17	P53844	350 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	RGM1	Q00453	211 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	SNZ1	Q03148	297 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	CGI121	Q03705	181 aa	Known RBP	0.65	□□□□□ -2.31
YDL196W	YDL196W	LPP1	Q04396	274 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	FUS2	Q05670	677 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	RDS3	Q06835	107 aa	Predicted RBP	0.65	□□□□□ -2.31
YDL196W	YDL196W	ABP140	Q08641	628 aa	Known RBP	0.65	□□□□□ -2.31
YDL196W	YDL196W	VPS68	Q12016	184 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	YKL183C-A	Q3E765	70 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	TSC3	Q3E790	80 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	BOL1	Q3E793	110 aa		0.65	□□□□□ -2.31
YDL196W	YDL196W	JIP3	O13555	125 aa		0.64	□□□□□ -2.31
YDL196W	YDL196W	CDC28	P00546	298 aa	Known RBP	0.64	□□□□□ -2.31
YDL196W	YDL196W	REP2	P03872	296 aa		0.64	□□□□□ -2.31
YDL196W	YDL196W	YHR032W-A	P0C5N6	59 aa		0.64	□□□□□ -2.31
YDL196W	YDL196W	MATALPHA2	P0CY08	210 aa		0.64	□□□□□ -2.31
YDL196W	YDL196W	HMLALPHA2	P0CY09	210 aa		0.64	□□□□□ -2.31
YDL196W	YDL196W	URA5	P13298	226 aa	Known RBP	0.64	□□□□□ -2.31
YDL196W	YDL196W	KSS1	P14681	368 aa		0.64	□□□□□ -2.31
YDL196W	YDL196W	CBF1	P17106	351 aa		0.64	□□□□□ -2.31
YDL196W	YDL196W	GRX2	P17695	143 aa	Known RBP	0.64	□□□□□ -2.31
YDL196W	YDL196W	CKS1	P20486	150 aa	Known RBP	0.64	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms