RNA–Protein interactions for RNA: YDL128W

VCX1, Transcript of Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity, yeast

Gene VCX1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VCX1	YDL128W	YVH1	Q02256	364 aa	Known RBP	4.93	□□□□□ -1.62
VCX1	YDL128W	STD1	Q02794	444 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	YDR248C	Q03786	193 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	ASM4	Q05166	528 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	PIN3	Q06449	215 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	BSP1	Q06604	576 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	YOR015W	Q12169	119 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	VAM3	Q12241	283 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	IZH2	Q12442	317 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	RPS25B	P0C0T4	108 aa	Known RBP	4.92	□□□□□ -1.62
VCX1	YDL128W	MATALPHA1	P0CY06	175 aa		4.92	□□□□□ -1.62
VCX1	YDL128W	HMLALPHA1	P0CY07	175 aa		4.92	□□□□□ -1.62
VCX1	YDL128W	HAP3	P13434	144 aa		4.92	□□□□□ -1.62
VCX1	YDL128W	RPB5	P20434	215 aa		4.92	□□□□□ -1.62
VCX1	YDL128W	RNA15	P25299	296 aa	Predicted RBP	4.92	□□□□□ -1.62
VCX1	YDL128W	VBA2	P38358	474 aa	Known RBP	4.92	□□□□□ -1.62
VCX1	YDL128W	CUE1	P38428	203 aa		4.92	□□□□□ -1.62
VCX1	YDL128W	RRP3	P38712	501 aa	Known RBP	4.92	□□□□□ -1.62
VCX1	YDL128W	NSA2	P40078	261 aa	Known RBP	4.92	□□□□□ -1.62
VCX1	YDL128W	YGL235W	P53071	178 aa		4.92	□□□□□ -1.62
VCX1	YDL128W	SCW4	P53334	386 aa	Known RBP	4.92	□□□□□ -1.62
VCX1	YDL128W	SMM1	P53720	384 aa	Known RBP	4.92	□□□□□ -1.62
VCX1	YDL128W	YMR178W	Q03219	274 aa	Known RBP	4.92	□□□□□ -1.62
VCX1	YDL128W	EKI1	Q03764	534 aa		4.92	□□□□□ -1.62
VCX1	YDL128W	TVP18	Q04767	167 aa		4.92	□□□□□ -1.62
VCX1	YDL128W	RPS25A	Q3E792	108 aa	Predicted RBP	4.92	□□□□□ -1.62
VCX1	YDL128W	ILV5	P06168	395 aa	Known RBP	4.91	□□□□□ -1.62
VCX1	YDL128W	GDH1	P07262	454 aa	Known RBP	4.91	□□□□□ -1.62
VCX1	YDL128W	MET3	P08536	511 aa		4.91	□□□□□ -1.62
VCX1	YDL128W	LSB5	P25369	354 aa		4.91	□□□□□ -1.62
VCX1	YDL128W	RFA2	P26754	273 aa	Known RBP	4.91	□□□□□ -1.62
VCX1	YDL128W	PRE2	P30656	287 aa	Known RBP	4.91	□□□□□ -1.62
VCX1	YDL128W	MDL1	P33310	695 aa		4.91	□□□□□ -1.62
VCX1	YDL128W	POA1	P38218	177 aa		4.91	□□□□□ -1.62
VCX1	YDL128W	HEM14	P40012	539 aa		4.91	□□□□□ -1.62
VCX1	YDL128W	CFD1	P40558	293 aa		4.91	□□□□□ -1.62
VCX1	YDL128W	YGR149W	P48236	432 aa		4.91	□□□□□ -1.62
VCX1	YDL128W	EMC4	P53073	190 aa		4.91	□□□□□ -1.62
VCX1	YDL128W	RMD9	P53140	646 aa	Known RBP	4.91	□□□□□ -1.62
VCX1	YDL128W	SUN4	P53616	420 aa		4.91	□□□□□ -1.62
VCX1	YDL128W	YNR066C	P53752	436 aa		4.91	□□□□□ -1.62
VCX1	YDL128W	YPL067C	Q02754	198 aa		4.91	□□□□□ -1.62
VCX1	YDL128W	SRL2	Q12020	392 aa		4.91	□□□□□ -1.62
VCX1	YDL128W	YCT1	Q12235	531 aa		4.91	□□□□□ -1.62
VCX1	YDL128W	ATG5	Q12380	294 aa		4.91	□□□□□ -1.62
VCX1	YDL128W	MSB2	P32334	1306 aa		4.91	□□□□□ -1.62
VCX1	YDL128W	TOM1	Q03280	3268 aa		4.9	□□□□□ -1.62
VCX1	YDL128W	QCR2	P07257	368 aa		4.9	□□□□□ -1.63
VCX1	YDL128W	NHP6A	P11632	93 aa	Known RBP	4.9	□□□□□ -1.63
VCX1	YDL128W	BGL2	P15703	313 aa	Known RBP	4.9	□□□□□ -1.63
VCX1	YDL128W	PRE1	P22141	198 aa	Known RBP	4.9	□□□□□ -1.63
VCX1	YDL128W	YSR3	P23501	404 aa		4.9	□□□□□ -1.63
VCX1	YDL128W	ERG3	P32353	365 aa		4.9	□□□□□ -1.63
VCX1	YDL128W	SLC1	P33333	303 aa		4.9	□□□□□ -1.63
VCX1	YDL128W	YKL075C	P36083	450 aa		4.9	□□□□□ -1.63
VCX1	YDL128W	ARC40	P38328	384 aa	Known RBP	4.9	□□□□□ -1.63
VCX1	YDL128W	SLM6	P38343	150 aa		4.9	□□□□□ -1.63
VCX1	YDL128W	HSP10	P38910	106 aa		4.9	□□□□□ -1.63
VCX1	YDL128W	YIP4	P53093	235 aa		4.9	□□□□□ -1.63
VCX1	YDL128W	FLC3	P53121	802 aa		4.9	□□□□□ -1.63
VCX1	YDL128W	SGF73	P53165	657 aa		4.9	□□□□□ -1.63
VCX1	YDL128W	OGG1	P53397	376 aa	Predicted RBP	4.9	□□□□□ -1.63
VCX1	YDL128W	PDR16	P53860	351 aa	Known RBP	4.9	□□□□□ -1.63
VCX1	YDL128W	YLR152C	P54072	576 aa		4.9	□□□□□ -1.63
VCX1	YDL128W	YDR366C	P87287	132 aa		4.9	□□□□□ -1.63
VCX1	YDL128W	TMN2	Q04562	672 aa		4.9	□□□□□ -1.63
VCX1	YDL128W	YFT2	Q06676	274 aa		4.9	□□□□□ -1.63
VCX1	YDL128W	SUL2	Q12325	893 aa		4.9	□□□□□ -1.63
VCX1	YDL128W	RAX2	Q12465	1220 aa		4.9	□□□□□ -1.63
VCX1	YDL128W	OLE1	P21147	510 aa	Known RBP	4.89	□□□□□ -1.63
VCX1	YDL128W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
VCX1	YDL128W	DAL3	P32459	195 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	MTC7	P32633	139 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	TIM12	P32830	109 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	UPS2	P35200	230 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	LRO1	P40345	661 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	YIL161W	P40449	235 aa	Known RBP	4.89	□□□□□ -1.63
VCX1	YDL128W	GPP1	P41277	250 aa	Known RBP	4.89	□□□□□ -1.63
VCX1	YDL128W	YPL014W	Q02606	381 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	VPS28	Q02767	242 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	NRG1	Q03125	231 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	SHH3	Q04487	196 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	ROY1	Q04847	553 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	FSH2	Q05015	223 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	MRX8	Q05473	314 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	YOL073C	Q08232	322 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	YPL272C	Q08984	517 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	YPQ1	Q12010	308 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	YDR262W	Q12331	272 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	YOP1	Q12402	180 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	LAS17	Q12446	633 aa		4.89	□□□□□ -1.63
VCX1	YDL128W	COX5B	P00425	151 aa		4.88	□□□□□ -1.63
VCX1	YDL128W	RFA1	P22336	621 aa	Known RBP	4.88	□□□□□ -1.63
VCX1	YDL128W	MAK32	P23060	363 aa		4.88	□□□□□ -1.63
VCX1	YDL128W	ADK2	P26364	225 aa		4.88	□□□□□ -1.63
VCX1	YDL128W	SSH4	P32343	579 aa		4.88	□□□□□ -1.63
VCX1	YDL128W	TCA17	P32613	152 aa		4.88	□□□□□ -1.63
VCX1	YDL128W	TRS65	P32893	560 aa		4.88	□□□□□ -1.63
VCX1	YDL128W	YOR062C	P36025	268 aa		4.88	□□□□□ -1.63
VCX1	YDL128W	YKL071W	P36086	256 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms