RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeastyeast

Gene PBP4, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP4YDL053C CSM4Q08955 156 aa1.58□□□□□ -2.16
PBP4YDL053C BOL1Q3E793 110 aa1.58□□□□□ -2.16
PBP4YDL053C SEY1Q99287 776 aa1.58□□□□□ -2.16
PBP4YDL053C YBR121C-AP0C5L4 52 aa1.57□□□□□ -2.16
PBP4YDL053C MATALPHA2P0CY08 210 aa1.57□□□□□ -2.16
PBP4YDL053C HMLALPHA2P0CY09 210 aa1.57□□□□□ -2.16
PBP4YDL053C APA2P22108 325 aa1.57□□□□□ -2.16
PBP4YDL053C PRP18P33411 251 aaPredicted RBP1.57□□□□□ -2.16
PBP4YDL053C VPS21P36017 210 aaKnown RBP1.57□□□□□ -2.16
PBP4YDL053C URA8P38627 578 aaPredicted RBP1.57□□□□□ -2.16
PBP4YDL053C DOG1P38774 246 aa1.57□□□□□ -2.16
PBP4YDL053C RTC3P38804 111 aaPredicted RBP1.57□□□□□ -2.16
PBP4YDL053C SEC72P39742 193 aaKnown RBP1.57□□□□□ -2.16
PBP4YDL053C AYR1P40471 297 aa1.57□□□□□ -2.16
PBP4YDL053C HOC1P47124 396 aa1.57□□□□□ -2.16
PBP4YDL053C RHO3Q00245 231 aaKnown RBP1.57□□□□□ -2.16
PBP4YDL053C CDC123Q05791 360 aa1.57□□□□□ -2.16
PBP4YDL053C RRS1Q08746 203 aaKnown RBP1.57□□□□□ -2.16
PBP4YDL053C YRA1Q12159 226 aaKnown RBP1.57□□□□□ -2.16
PBP4YDL053C YCT1Q12235 531 aa1.57□□□□□ -2.16
PBP4YDL053C TCP1P12612 559 aaKnown RBP1.56□□□□□ -2.16
PBP4YDL053C CBF1P17106 351 aa1.56□□□□□ -2.16
PBP4YDL053C YMR31P19955 123 aa1.56□□□□□ -2.16
PBP4YDL053C ADE1P27616 306 aa1.56□□□□□ -2.16
PBP4YDL053C PEX4P29340 183 aa1.56□□□□□ -2.16
PBP4YDL053C ACP1P32463 125 aa1.56□□□□□ -2.16
PBP4YDL053C CBT1P36038 271 aaPredicted RBP1.56□□□□□ -2.16
PBP4YDL053C MIC12P38341 106 aa1.56□□□□□ -2.16
PBP4YDL053C ERG28P40030 148 aa1.56□□□□□ -2.16
PBP4YDL053C YIL001WP40560 513 aa1.56□□□□□ -2.16
PBP4YDL053C JHD2P47156 728 aaPredicted RBP1.56□□□□□ -2.16
PBP4YDL053C GTR2P53290 341 aa1.56□□□□□ -2.16
PBP4YDL053C YNL046WP53956 172 aa1.56□□□□□ -2.16
PBP4YDL053C INM2Q05533 292 aa1.56□□□□□ -2.16
PBP4YDL053C ATO3Q12359 275 aa1.56□□□□□ -2.16
PBP4YDL053C SNU23Q12368 194 aaPredicted RBP1.56□□□□□ -2.16
PBP4YDL053C YKL183C-AQ3E765 70 aa1.56□□□□□ -2.16
PBP4YDL053C QCR7P00128 127 aa1.55□□□□□ -2.16
PBP4YDL053C FBA1P14540 359 aaKnown RBP1.55□□□□□ -2.16
PBP4YDL053C SCL1P21243 252 aaKnown RBP1.55□□□□□ -2.16
PBP4YDL053C TAF14P35189 244 aa1.55□□□□□ -2.16
PBP4YDL053C COX15P40086 486 aa1.55□□□□□ -2.16
PBP4YDL053C PRE6P40303 254 aaKnown RBP1.55□□□□□ -2.16
PBP4YDL053C ERG10P41338 398 aaKnown RBP1.55□□□□□ -2.16
PBP4YDL053C CWC23P52868 283 aaPredicted RBP1.55□□□□□ -2.16
PBP4YDL053C GET1P53192 235 aa1.55□□□□□ -2.16
PBP4YDL053C NOP19P53317 196 aaPredicted RBP1.55□□□□□ -2.16
PBP4YDL053C MRPS8Q03799 155 aa1.55□□□□□ -2.16
PBP4YDL053C YCL012CQ8J0M4 134 aa1.55□□□□□ -2.16
PBP4YDL053C RAD9P14737 1309 aa1.55□□□□□ -2.16
PBP4YDL053C SIR4P11978 1358 aa1.55□□□□□ -2.16
PBP4YDL053C YDR157WA0A023PZE8 133 aa1.54□□□□□ -2.16
PBP4YDL053C HTB1P02293 131 aaKnown RBP1.54□□□□□ -2.16
PBP4YDL053C HTB2P02294 131 aa1.54□□□□□ -2.16
PBP4YDL053C DSF1P0CX08 502 aa1.54□□□□□ -2.16
PBP4YDL053C YNR073CP0CX09 502 aa1.54□□□□□ -2.16
PBP4YDL053C RPL35AP0CX84 120 aaKnown RBP1.54□□□□□ -2.16
PBP4YDL053C RPL35BP0CX85 120 aaKnown RBP1.54□□□□□ -2.16
PBP4YDL053C MDH3P32419 343 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
PBP4YDL053C SSO1P32867 290 aa1.54□□□□□ -2.16
PBP4YDL053C UBC6P33296 250 aaPredicted RBP1.54□□□□□ -2.16
PBP4YDL053C CUE1P38428 203 aa1.54□□□□□ -2.16
PBP4YDL053C TRM5P38793 499 aa1.54□□□□□ -2.16
PBP4YDL053C YHR127WP38833 243 aaKnown RBP1.54□□□□□ -2.16
PBP4YDL053C IKI1P38874 309 aa1.54□□□□□ -2.16
PBP4YDL053C YNL194CP40169 301 aa1.54□□□□□ -2.16
PBP4YDL053C YJR079WP47126 109 aa1.54□□□□□ -2.16
PBP4YDL053C MIC26P50087 233 aa1.54□□□□□ -2.16
PBP4YDL053C RTC4P53850 401 aa1.54□□□□□ -2.16
PBP4YDL053C RRP17Q04031 235 aaPredicted RBP1.54□□□□□ -2.16
PBP4YDL053C YPL257WQ08974 193 aa1.54□□□□□ -2.16
PBP4YDL053C IPP1P00817 287 aaKnown RBP1.53□□□□□ -2.16
PBP4YDL053C SNA3P14359 133 aa1.53□□□□□ -2.16
PBP4YDL053C RFA3P26755 122 aaKnown RBP1.53□□□□□ -2.16
PBP4YDL053C IDH1P28834 360 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
PBP4YDL053C VMA11P32842 164 aa1.53□□□□□ -2.16
PBP4YDL053C PRX1P34227 261 aaKnown RBP1.53□□□□□ -2.16
PBP4YDL053C KDX1P36005 433 aa1.53□□□□□ -2.16
PBP4YDL053C YPT52P36018 234 aaKnown RBP1.53□□□□□ -2.16
PBP4YDL053C FES1P38260 290 aa1.53□□□□□ -2.16
PBP4YDL053C PEP8P40335 379 aa1.53□□□□□ -2.16
PBP4YDL053C POG1P40473 351 aa1.53□□□□□ -2.16
PBP4YDL053C FIS1P40515 155 aa1.53□□□□□ -2.16
PBP4YDL053C CIS3P47001 227 aa1.53□□□□□ -2.16
PBP4YDL053C TMA22P47089 198 aaPredicted RBP1.53□□□□□ -2.16
PBP4YDL053C MGA1P53050 456 aa1.53□□□□□ -2.16
PBP4YDL053C SEI1Q06058 285 aa1.53□□□□□ -2.16
PBP4YDL053C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
PBP4YDL053C GPM2Q12008 311 aa1.53□□□□□ -2.16
PBP4YDL053C DCN1Q12395 269 aa1.53□□□□□ -2.16
PBP4YDL053C RPL9AP05738 191 aaKnown RBP1.52□□□□□ -2.17
PBP4YDL053C SPT3P06844 337 aa1.52□□□□□ -2.17
PBP4YDL053C ERD2P18414 219 aa1.52□□□□□ -2.17
PBP4YDL053C CDC10P25342 322 aaKnown RBP1.52□□□□□ -2.17
PBP4YDL053C NTF2P33331 125 aaKnown RBP1.52□□□□□ -2.17
PBP4YDL053C YKL075CP36083 450 aa1.52□□□□□ -2.17
PBP4YDL053C MAK5P38112 773 aaPredicted RBP1.52□□□□□ -2.17
PBP4YDL053C SHG1P38337 142 aa1.52□□□□□ -2.17
PBP4YDL053C IRC18P47056 224 aa1.52□□□□□ -2.17
PBP4YDL053C NUP57P48837 541 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms