RNA–Protein interactions for RNA: YBL078C

ATG8, Transcript of Component of autophagosomes and Cvt vesicles, yeastyeast

Gene ATG8, Length 354 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG8YBL078C SDC1Q03323 175 aa3.5□□□□□ -1.85
ATG8YBL078C SPG3Q04398 127 aaPredicted RBP3.5□□□□□ -1.85
ATG8YBL078C SPG4Q04438 115 aa3.5□□□□□ -1.85
ATG8YBL078C IZH2Q12442 317 aa3.5□□□□□ -1.85
ATG8YBL078C YER078W-AQ3E7A2 54 aa3.5□□□□□ -1.85
ATG8YBL078C YDR034W-BQ6Q5X2 51 aa3.5□□□□□ -1.85
ATG8YBL078C SPT3P06844 337 aa3.49□□□□□ -1.85
ATG8YBL078C URA6P15700 204 aa3.49□□□□□ -1.85
ATG8YBL078C POP4P38336 279 aa3.49□□□□□ -1.85
ATG8YBL078C YJR149WP47177 404 aa3.49□□□□□ -1.85
ATG8YBL078C OST3P48439 350 aa3.49□□□□□ -1.85
ATG8YBL078C TOS8P53147 276 aa3.49□□□□□ -1.85
ATG8YBL078C COG7P53195 279 aa3.49□□□□□ -1.85
ATG8YBL078C YGR015CP53208 328 aa3.49□□□□□ -1.85
ATG8YBL078C SEI1Q06058 285 aa3.49□□□□□ -1.85
ATG8YBL078C YPR147CQ06522 304 aaKnown RBP3.49□□□□□ -1.85
ATG8YBL078C TPO4Q12256 659 aa3.49□□□□□ -1.85
ATG8YBL078C COX5AP00424 153 aa3.48□□□□□ -1.85
ATG8YBL078C PUT1P09368 476 aa3.48□□□□□ -1.85
ATG8YBL078C PEX34P25584 144 aa3.48□□□□□ -1.85
ATG8YBL078C CDC50P25656 391 aa3.48□□□□□ -1.85
ATG8YBL078C CAM1P29547 415 aaKnown RBP3.48□□□□□ -1.85
ATG8YBL078C SDH3P33421 198 aa3.48□□□□□ -1.85
ATG8YBL078C SRY1P36007 326 aa3.48□□□□□ -1.85
ATG8YBL078C AME1P38313 324 aa3.48□□□□□ -1.85
ATG8YBL078C COG3P40094 801 aa3.48□□□□□ -1.85
ATG8YBL078C UFE1P41834 346 aa3.48□□□□□ -1.85
ATG8YBL078C STB1P42845 420 aa3.48□□□□□ -1.85
ATG8YBL078C MIC19P43594 170 aa3.48□□□□□ -1.85
ATG8YBL078C IRC18P47056 224 aa3.48□□□□□ -1.85
ATG8YBL078C YJR141WP47172 347 aaPredicted RBP3.48□□□□□ -1.85
ATG8YBL078C BRR6P53062 197 aa3.48□□□□□ -1.85
ATG8YBL078C GTR2P53290 341 aa3.48□□□□□ -1.85
ATG8YBL078C YPL113CQ02961 396 aa3.48□□□□□ -1.85
ATG8YBL078C RRP17Q04031 235 aaPredicted RBP3.48□□□□□ -1.85
ATG8YBL078C ARR2Q06597 130 aa3.48□□□□□ -1.85
ATG8YBL078C RRP40Q08285 240 aaKnown RBP3.48□□□□□ -1.85
ATG8YBL078C EFG1Q3E705 233 aaKnown RBP3.48□□□□□ -1.85
ATG8YBL078C YOL163WP0CF20 169 aa3.47□□□□□ -1.85
ATG8YBL078C BGL2P15703 313 aaKnown RBP3.47□□□□□ -1.85
ATG8YBL078C DPB2P24482 689 aaPredicted RBP3.47□□□□□ -1.85
ATG8YBL078C VPH2P32341 215 aa3.47□□□□□ -1.85
ATG8YBL078C MAK5P38112 773 aaPredicted RBP3.47□□□□□ -1.85
ATG8YBL078C SHE1P38200 338 aa3.47□□□□□ -1.85
ATG8YBL078C FES1P38260 290 aa3.47□□□□□ -1.85
ATG8YBL078C PTH1P38876 190 aaKnown RBP3.47□□□□□ -1.85
ATG8YBL078C OXA1P39952 402 aa3.47□□□□□ -1.85
ATG8YBL078C YEL028WP39989 153 aa3.47□□□□□ -1.85
ATG8YBL078C YMR144WP40214 342 aaKnown RBP3.47□□□□□ -1.85
ATG8YBL078C YIL012WP40551 113 aa3.47□□□□□ -1.85
ATG8YBL078C MCM22P47167 239 aa3.47□□□□□ -1.85
ATG8YBL078C YML096WQ04489 525 aa3.47□□□□□ -1.85
ATG8YBL078C PBA1Q05778 276 aa3.47□□□□□ -1.85
ATG8YBL078C SWC7Q06707 132 aa3.47□□□□□ -1.85
ATG8YBL078C SRL1Q08673 210 aa3.47□□□□□ -1.85
ATG8YBL078C JID1Q12350 301 aa3.47□□□□□ -1.85
ATG8YBL078C WTM1Q12363 437 aaKnown RBP3.47□□□□□ -1.85
ATG8YBL078C MRX4Q12467 430 aa3.47□□□□□ -1.85
ATG8YBL078C RPL21BQ12672 160 aaKnown RBP3.47□□□□□ -1.85
ATG8YBL078C CDC28P00546 298 aaKnown RBP3.46□□□□□ -1.86
ATG8YBL078C QCR2P07257 368 aa3.46□□□□□ -1.86
ATG8YBL078C ZWF1P11412 505 aaKnown RBP3.46□□□□□ -1.86
ATG8YBL078C GCY1P14065 312 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
ATG8YBL078C FPR1P20081 114 aaKnown RBP3.46□□□□□ -1.86
ATG8YBL078C AAT2P23542 418 aaKnown RBP3.46□□□□□ -1.86
ATG8YBL078C IMP1P28627 190 aa3.46□□□□□ -1.86
ATG8YBL078C MRPL39P36533 70 aa3.46□□□□□ -1.86
ATG8YBL078C BAT1P38891 393 aaKnown RBP3.46□□□□□ -1.86
ATG8YBL078C TIM17P39515 158 aa3.46□□□□□ -1.86
ATG8YBL078C BUD13P46947 266 aaPredicted RBP3.46□□□□□ -1.86
ATG8YBL078C FMP48P53233 369 aa3.46□□□□□ -1.86
ATG8YBL078C SYF2P53277 215 aaPredicted RBP3.46□□□□□ -1.86
ATG8YBL078C PDR17P53844 350 aa3.46□□□□□ -1.86
ATG8YBL078C YNL140CP53910 189 aa3.46□□□□□ -1.86
ATG8YBL078C CRZ1P53968 678 aa3.46□□□□□ -1.86
ATG8YBL078C YLR460CP54007 376 aa3.46□□□□□ -1.86
ATG8YBL078C YET3Q07451 203 aa3.46□□□□□ -1.86
ATG8YBL078C YNG1Q08465 219 aa3.46□□□□□ -1.86
ATG8YBL078C RAX2Q12465 1220 aa3.46□□□□□ -1.86
ATG8YBL078C YPL229WQ99395 206 aa3.46□□□□□ -1.86
ATG8YBL078C CPT1P17898 393 aa3.45□□□□□ -1.86
ATG8YBL078C MGT1P26188 188 aa3.45□□□□□ -1.86
ATG8YBL078C OAC1P32332 324 aa3.45□□□□□ -1.86
ATG8YBL078C CAF4P36130 643 aa3.45□□□□□ -1.86
ATG8YBL078C SHG1P38337 142 aa3.45□□□□□ -1.86
ATG8YBL078C SMX2P40204 77 aaKnown RBP3.45□□□□□ -1.86
ATG8YBL078C GAB1P41733 394 aa3.45□□□□□ -1.86
ATG8YBL078C YJL016WP47072 561 aa3.45□□□□□ -1.86
ATG8YBL078C FLC3P53121 802 aa3.45□□□□□ -1.86
ATG8YBL078C YGR018CP53211 109 aa3.45□□□□□ -1.86
ATG8YBL078C RNH201P53942 307 aa3.45□□□□□ -1.86
ATG8YBL078C YDR115WQ04598 105 aa3.45□□□□□ -1.86
ATG8YBL078C HRI1Q05905 244 aaKnown RBP3.45□□□□□ -1.86
ATG8YBL078C NDD1Q08887 554 aa3.45□□□□□ -1.86
ATG8YBL078C USB1Q12208 290 aaKnown RBP3.45□□□□□ -1.86
ATG8YBL078C ERV2Q12284 196 aa3.45□□□□□ -1.86
ATG8YBL078C OCA6Q12454 224 aa3.45□□□□□ -1.86
ATG8YBL078C YKL068W-AQ3E826 78 aa3.45□□□□□ -1.86
ATG8YBL078C GPA2P10823 449 aa3.44□□□□□ -1.86
ATG8YBL078C TRR1P29509 319 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms