RNA–Protein interactions for RNA: YBL055C

YBL055C, Transcript of 3'-->5' exonuclease and endonuclease with a possible role in apoptosis, yeastyeast

Gene YBL055C, Length 1,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBL055CYBL055C CMD1P06787 147 aaKnown RBP2.34□□□□□ -2.03
YBL055CYBL055C ARG80P07249 177 aa2.34□□□□□ -2.03
YBL055CYBL055C MATALPHA1P0CY06 175 aa2.34□□□□□ -2.03
YBL055CYBL055C HMLALPHA1P0CY07 175 aa2.34□□□□□ -2.03
YBL055CYBL055C MGT1P26188 188 aa2.34□□□□□ -2.03
YBL055CYBL055C QRI5P32344 111 aa2.34□□□□□ -2.03
YBL055CYBL055C YBL081WP38180 368 aaKnown RBP2.34□□□□□ -2.03
YBL055CYBL055C LDB7P38210 180 aa2.34□□□□□ -2.03
YBL055CYBL055C SMX2P40204 77 aaKnown RBP2.34□□□□□ -2.03
YBL055CYBL055C GLG2P47011 380 aa2.34□□□□□ -2.03
YBL055CYBL055C TIM13P53299 105 aa2.34□□□□□ -2.03
YBL055CYBL055C MZM1Q03429 123 aaPredicted RBP2.34□□□□□ -2.03
YBL055CYBL055C FCF1Q05498 189 aaPredicted RBP2.34□□□□□ -2.03
YBL055CYBL055C YEL009C-AA0A023PZF2 135 aa2.33□□□□□ -2.04
YBL055CYBL055C CDC8P00572 216 aa2.33□□□□□ -2.04
YBL055CYBL055C SNA3P14359 133 aa2.33□□□□□ -2.04
YBL055CYBL055C RNA15P25299 296 aaPredicted RBP2.33□□□□□ -2.04
YBL055CYBL055C RPS5P26783 225 aaKnown RBP2.33□□□□□ -2.04
YBL055CYBL055C DOA4P32571 926 aa2.33□□□□□ -2.04
YBL055CYBL055C YHL026CP38740 315 aa2.33□□□□□ -2.04
YBL055CYBL055C TEM1P38987 245 aa2.33□□□□□ -2.04
YBL055CYBL055C SMB1P40018 196 aaKnown RBP2.33□□□□□ -2.04
YBL055CYBL055C MSS2P40990 351 aa2.33□□□□□ -2.04
YBL055CYBL055C OTU1P43558 301 aa2.33□□□□□ -2.04
YBL055CYBL055C AAH1P53909 347 aa2.33□□□□□ -2.04
YBL055CYBL055C YDR209CQ03480 137 aa2.33□□□□□ -2.04
YBL055CYBL055C KRE28Q04431 385 aa2.33□□□□□ -2.04
YBL055CYBL055C KRE1P17260 313 aa2.32□□□□□ -2.04
YBL055CYBL055C PPH21P23594 369 aa2.32□□□□□ -2.04
YBL055CYBL055C MEI4P29467 408 aa2.32□□□□□ -2.04
YBL055CYBL055C HOM6P31116 359 aaKnown RBP2.32□□□□□ -2.04
YBL055CYBL055C YBR032WP38223 100 aa2.32□□□□□ -2.04
YBL055CYBL055C ARN2P38724 620 aa2.32□□□□□ -2.04
YBL055CYBL055C SNZ3P43545 298 aa2.32□□□□□ -2.04
YBL055CYBL055C HOC1P47124 396 aa2.32□□□□□ -2.04
YBL055CYBL055C SNZ2P53824 298 aa2.32□□□□□ -2.04
YBL055CYBL055C NOP13P53883 403 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
YBL055CYBL055C IGO1P53897 168 aa2.32□□□□□ -2.04
YBL055CYBL055C YPL039WQ03080 316 aa2.32□□□□□ -2.04
YBL055CYBL055C SPG3Q04398 127 aaPredicted RBP2.32□□□□□ -2.04
YBL055CYBL055C SLD7Q08457 257 aa2.32□□□□□ -2.04
YBL055CYBL055C CSM4Q08955 156 aa2.32□□□□□ -2.04
YBL055CYBL055C YPL225WQ08971 146 aaKnown RBP2.32□□□□□ -2.04
YBL055CYBL055C NOT5Q12514 560 aaPredicted RBP2.32□□□□□ -2.04
YBL055CYBL055C YBL112CQ3E7Y4 105 aa2.32□□□□□ -2.04
YBL055CYBL055C JIP3O13555 125 aa2.31□□□□□ -2.04
YBL055CYBL055C RPB4P20433 221 aaPredicted RBP2.31□□□□□ -2.04
YBL055CYBL055C VPS3P23643 1011 aa2.31□□□□□ -2.04
YBL055CYBL055C TOM40P23644 387 aaKnown RBP2.31□□□□□ -2.04
YBL055CYBL055C SEC14P24280 304 aaKnown RBP2.31□□□□□ -2.04
YBL055CYBL055C EHD3P28817 500 aa2.31□□□□□ -2.04
YBL055CYBL055C SFC1P33303 322 aa2.31□□□□□ -2.04
YBL055CYBL055C JEN1P36035 616 aa2.31□□□□□ -2.04
YBL055CYBL055C YKR032WP36127 104 aa2.31□□□□□ -2.04
YBL055CYBL055C POP4P38336 279 aa2.31□□□□□ -2.04
YBL055CYBL055C URA8P38627 578 aaPredicted RBP2.31□□□□□ -2.04
YBL055CYBL055C YER084WP40057 128 aa2.31□□□□□ -2.04
YBL055CYBL055C YJR141WP47172 347 aaPredicted RBP2.31□□□□□ -2.04
YBL055CYBL055C ASI3P53983 676 aa2.31□□□□□ -2.04
YBL055CYBL055C YLR053CQ12026 108 aa2.31□□□□□ -2.04
YBL055CYBL055C RIO1Q12196 484 aaKnown RBP2.31□□□□□ -2.04
YBL055CYBL055C OCA6Q12454 224 aa2.31□□□□□ -2.04
YBL055CYBL055C AGC1Q12482 902 aa2.31□□□□□ -2.04
YBL055CYBL055C YPL119C-AQ3E751 87 aa2.31□□□□□ -2.04
YBL055CYBL055C NUM1Q00402 2748 aa2.3□□□□□ -2.04
YBL055CYBL055C RHO1P06780 209 aaKnown RBP2.3□□□□□ -2.04
YBL055CYBL055C UTR5P32630 166 aa2.3□□□□□ -2.04
YBL055CYBL055C UBC6P33296 250 aaPredicted RBP2.3□□□□□ -2.04
YBL055CYBL055C ETR1P38071 380 aa2.3□□□□□ -2.04
YBL055CYBL055C YBR096WP38256 230 aa2.3□□□□□ -2.04
YBL055CYBL055C TMA22P47089 198 aaPredicted RBP2.3□□□□□ -2.04
YBL055CYBL055C JHD2P47156 728 aaPredicted RBP2.3□□□□□ -2.04
YBL055CYBL055C USE1P53146 245 aa2.3□□□□□ -2.04
YBL055CYBL055C SYF2P53277 215 aaPredicted RBP2.3□□□□□ -2.04
YBL055CYBL055C RPL22BP56628 122 aaKnown RBP2.3□□□□□ -2.04
YBL055CYBL055C CTF19Q02732 369 aa2.3□□□□□ -2.04
YBL055CYBL055C FAR8Q05040 523 aa2.3□□□□□ -2.04
YBL055CYBL055C YET3Q07451 203 aa2.3□□□□□ -2.04
YBL055CYBL055C YMR030W-AQ3E760 96 aa2.3□□□□□ -2.04
YBL055CYBL055C SEY1Q99287 776 aa2.3□□□□□ -2.04
YBL055CYBL055C SLH1P53327 1967 aaKnown RBP2.29□□□□□ -2.04
YBL055CYBL055C COX5AP00424 153 aa2.29□□□□□ -2.04
YBL055CYBL055C HAP2P06774 265 aa2.29□□□□□ -2.04
YBL055CYBL055C KDX1P36005 433 aa2.29□□□□□ -2.04
YBL055CYBL055C ECM13P38195 257 aa2.29□□□□□ -2.04
YBL055CYBL055C HEK2P38199 381 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
YBL055CYBL055C AIM18P38884 321 aa2.29□□□□□ -2.04
YBL055CYBL055C HOP2P53187 214 aa2.29□□□□□ -2.04
YBL055CYBL055C SPO77Q06134 477 aa2.29□□□□□ -2.04
YBL055CYBL055C ATG17Q06410 417 aa2.29□□□□□ -2.04
YBL055CYBL055C CLP1Q08685 445 aaPredicted RBP2.29□□□□□ -2.04
YBL055CYBL055C GPM2Q12008 311 aa2.29□□□□□ -2.04
YBL055CYBL055C YCT1Q12235 531 aa2.29□□□□□ -2.04
YBL055CYBL055C YPL247CQ12523 523 aa2.29□□□□□ -2.04
YBL055CYBL055C ADF1Q2V2Q1 113 aa2.29□□□□□ -2.04
YBL055CYBL055C QCR6P00127 147 aa2.28□□□□□ -2.04
YBL055CYBL055C RPL26AP05743 127 aaKnown RBP2.28□□□□□ -2.04
YBL055CYBL055C RPL24BP24000 155 aaKnown RBP2.28□□□□□ -2.04
YBL055CYBL055C DPB2P24482 689 aaPredicted RBP2.28□□□□□ -2.04
YBL055CYBL055C PBN1P25580 416 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms