RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 MNT4P53745 580 aa-0.88□□□□□ -2.55
snR48snR48 CUS2P53830 285 aaPredicted RBP-0.88□□□□□ -2.55
snR48snR48 SNA3P14359 133 aa-0.89□□□□□ -2.55
snR48snR48 POF1P25576 258 aa-0.89□□□□□ -2.55
snR48snR48 SMI1P32566 505 aa-0.89□□□□□ -2.55
snR48snR48 MRX3P38172 270 aa-0.89□□□□□ -2.55
snR48snR48 YHL042WP38729 150 aa-0.89□□□□□ -2.55
snR48snR48 YAR068WP39564 161 aa-0.89□□□□□ -2.55
snR48snR48 MEP1P40260 492 aa-0.89□□□□□ -2.55
snR48snR48 JEM1P40358 645 aa-0.89□□□□□ -2.55
snR48snR48 LOH1P47055 219 aa-0.89□□□□□ -2.55
snR48snR48 CWC27Q02770 301 aa-0.89□□□□□ -2.55
snR48snR48 GAS3Q03655 524 aa-0.89□□□□□ -2.55
snR48snR48 YDR124WQ04608 324 aa-0.89□□□□□ -2.55
snR48snR48 BER1Q06688 274 aaKnown RBP-0.89□□□□□ -2.55
snR48snR48 YOR029WQ12243 111 aa-0.89□□□□□ -2.55
snR48snR48 RPP0P05317 312 aaKnown RBP-0.9□□□□□ -2.55
snR48snR48 YCL042WP25572 119 aa-0.9□□□□□ -2.55
snR48snR48 VPS45P38932 577 aa-0.9□□□□□ -2.55
snR48snR48 RMR1P53060 241 aa-0.9□□□□□ -2.55
snR48snR48 YNR077CP53758 84 aa-0.9□□□□□ -2.55
snR48snR48 GOT1Q03554 138 aa-0.9□□□□□ -2.55
snR48snR48 SPG3Q04398 127 aaPredicted RBP-0.9□□□□□ -2.55
snR48snR48 COQ10Q08058 207 aa-0.9□□□□□ -2.55
snR48snR48 YCT1Q12235 531 aa-0.9□□□□□ -2.55
snR48snR48 STH1P32597 1359 aa-0.91□□□□□ -2.55
snR48snR48 EHD3P28817 500 aa-0.91□□□□□ -2.56
snR48snR48 HIS2P38635 335 aa-0.91□□□□□ -2.56
snR48snR48 PEX17P40155 199 aa-0.91□□□□□ -2.56
snR48snR48 POP3P53833 195 aaPredicted RBP-0.91□□□□□ -2.56
snR48snR48 NOP13P53883 403 aaKnown RBP RIP-Chip data-0.91□□□□□ -2.56not detected
snR48snR48 CDC14Q00684 551 aa-0.91□□□□□ -2.56
snR48snR48 YLR297WQ05899 129 aa-0.91□□□□□ -2.56
snR48snR48 MSH5Q12175 901 aa-0.91□□□□□ -2.56
snR48snR48 PDR18P53756 1333 aa-0.91□□□□□ -2.56
snR48snR48 CDC8P00572 216 aa-0.92□□□□□ -2.56
snR48snR48 SIR2P06700 562 aa-0.92□□□□□ -2.56
snR48snR48 GPI12P23797 304 aa-0.92□□□□□ -2.56
snR48snR48 CSM1P25651 190 aa-0.92□□□□□ -2.56
snR48snR48 YPT52P36018 234 aaKnown RBP-0.92□□□□□ -2.56
snR48snR48 KNH1P50112 268 aa-0.92□□□□□ -2.56
snR48snR48 RIB4P50861 169 aaPredicted RBP-0.92□□□□□ -2.56
snR48snR48 YNL247WP53852 767 aaKnown RBP-0.92□□□□□ -2.56
snR48snR48 PDR16P53860 351 aaKnown RBP-0.92□□□□□ -2.56
snR48snR48 ABZ2Q03266 374 aa-0.92□□□□□ -2.56
snR48snR48 YPR147CQ06522 304 aaKnown RBP-0.92□□□□□ -2.56
snR48snR48 CDC37P06101 506 aaKnown RBP-0.93□□□□□ -2.56
snR48snR48 PRX1P34227 261 aaKnown RBP-0.93□□□□□ -2.56
snR48snR48 YET1P35723 206 aa-0.93□□□□□ -2.56
snR48snR48 YIL102CP40488 101 aa-0.93□□□□□ -2.56
snR48snR48 ARV1Q06541 321 aa-0.93□□□□□ -2.56
snR48snR48 YHR007C-AQ07074 71 aa-0.93□□□□□ -2.56
snR48snR48 IPP1P00817 287 aaKnown RBP-0.94□□□□□ -2.56
snR48snR48 CDC36P06100 191 aaPredicted RBP-0.94□□□□□ -2.56
snR48snR48 FCY2P17064 533 aa-0.94□□□□□ -2.56
snR48snR48 HYR1P40581 163 aaKnown RBP-0.94□□□□□ -2.56
snR48snR48 MRH4P53166 561 aa-0.94□□□□□ -2.56
snR48snR48 VOA1P53262 265 aa-0.94□□□□□ -2.56
snR48snR48 SYC1Q08553 188 aaPredicted RBP-0.94□□□□□ -2.56
snR48snR48 PRM3Q08931 133 aa-0.94□□□□□ -2.56
snR48snR48 RPC25P35718 212 aa-0.95□□□□□ -2.56
snR48snR48 JEN1P36035 616 aa-0.95□□□□□ -2.56
snR48snR48 YBR209WP38311 105 aa-0.95□□□□□ -2.56
snR48snR48 GLG2P47011 380 aa-0.95□□□□□ -2.56
snR48snR48 YJR056CP47115 236 aa-0.95□□□□□ -2.56
snR48snR48 ALG11P53954 548 aaKnown RBP-0.95□□□□□ -2.56
snR48snR48 YLR460CP54007 376 aa-0.95□□□□□ -2.56
snR48snR48 YPR172WQ06608 200 aa-0.95□□□□□ -2.56
snR48snR48 NIP7Q08962 181 aaKnown RBP-0.95□□□□□ -2.56
snR48snR48 HTL1Q9URQ5 78 aa-0.95□□□□□ -2.56
snR48snR48 SAR1P20606 190 aaKnown RBP-0.96□□□□□ -2.56
snR48snR48 MRPS28P21771 286 aa-0.96□□□□□ -2.56
snR48snR48 ECM33P38248 429 aaKnown RBP-0.96□□□□□ -2.56
snR48snR48 OPY1P38271 328 aa-0.96□□□□□ -2.56
snR48snR48 HSM3P38348 480 aa-0.96□□□□□ -2.56
snR48snR48 CDC40P40968 455 aaPredicted RBP-0.96□□□□□ -2.56
snR48snR48 SNZ3P43545 298 aa-0.96□□□□□ -2.56
snR48snR48 DOC1P53068 250 aa-0.96□□□□□ -2.56
snR48snR48 TUS1Q06412 1307 aa-0.96□□□□□ -2.56
snR48snR48 VPS21P36017 210 aaKnown RBP-0.97□□□□□ -2.56
snR48snR48 YFH7P43591 353 aa-0.97□□□□□ -2.56
snR48snR48 YMR252CQ04814 134 aa-0.97□□□□□ -2.56
snR48snR48 SME1Q12330 94 aaPredicted RBP-0.97□□□□□ -2.56
snR48snR48 YOR020W-AQ3E824 90 aa-0.97□□□□□ -2.56
snR48snR48 YSR3P23501 404 aa-0.98□□□□□ -2.57
snR48snR48 PET18P25362 215 aa-0.98□□□□□ -2.57
snR48snR48 MRPL39P36533 70 aa-0.98□□□□□ -2.57
snR48snR48 RPF1P38805 295 aaKnown RBP-0.98□□□□□ -2.57
snR48snR48 SSO2P39926 295 aa-0.98□□□□□ -2.57
snR48snR48 YEL008WP40001 126 aa-0.98□□□□□ -2.57
snR48snR48 EAF6P47128 113 aa-0.98□□□□□ -2.57
snR48snR48 TRM12Q04235 462 aa-0.98□□□□□ -2.57
snR48snR48 YKL070WP36087 169 aa-0.99□□□□□ -2.57
snR48snR48 YBR063CP38083 404 aa-0.99□□□□□ -2.57
snR48snR48 YAR064WP39563 99 aa-0.99□□□□□ -2.57
snR48snR48 PRE6P40303 254 aaKnown RBP-0.99□□□□□ -2.57
snR48snR48 RPA43P46669 326 aa-0.99□□□□□ -2.57
snR48snR48 YJR012CP47087 207 aa-0.99□□□□□ -2.57
snR48snR48 VAC14Q06708 880 aa-0.99□□□□□ -2.57
snR48snR48 RRP40Q08285 240 aaKnown RBP-0.99□□□□□ -2.57
Retrieved 100 of 5,963 RNA–protein pairs in 54.8 ms