RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W CDD1Q06549 142 aa2.93□□□□□ -1.94
VPS28YPL065W YPR172WQ06608 200 aa2.93□□□□□ -1.94
VPS28YPL065W CDC10P25342 322 aaKnown RBP2.92□□□□□ -1.94
VPS28YPL065W COS8P38723 381 aa2.92□□□□□ -1.94
VPS28YPL065W DCR2Q05924 578 aa2.92□□□□□ -1.94
VPS28YPL065W IPP1P00817 287 aaKnown RBP2.91□□□□□ -1.94
VPS28YPL065W SNA3P14359 133 aa2.91□□□□□ -1.94
VPS28YPL065W NTF2P33331 125 aaKnown RBP2.91□□□□□ -1.94
VPS28YPL065W MIC12P38341 106 aa2.91□□□□□ -1.94
VPS28YPL065W OTU1P43558 301 aa2.91□□□□□ -1.94
VPS28YPL065W RGM1Q00453 211 aa2.91□□□□□ -1.94
VPS28YPL065W FAR8Q05040 523 aa2.91□□□□□ -1.94
VPS28YPL065W INM2Q05533 292 aa2.91□□□□□ -1.94
VPS28YPL065W THP2O13539 261 aaKnown RBP2.9□□□□□ -1.95
VPS28YPL065W ARG80P07249 177 aa2.9□□□□□ -1.95
VPS28YPL065W YHR032W-AP0C5N6 59 aa2.9□□□□□ -1.95
VPS28YPL065W VMA6P32366 345 aaKnown RBP2.9□□□□□ -1.95
VPS28YPL065W CLB6P32943 380 aa2.9□□□□□ -1.95
VPS28YPL065W YJR149WP47177 404 aa2.9□□□□□ -1.95
VPS28YPL065W TOS8P53147 276 aa2.9□□□□□ -1.95
VPS28YPL065W SIR4P11978 1358 aa2.89□□□□□ -1.95
VPS28YPL065W YHR139C-AO13536 103 aa2.89□□□□□ -1.95
VPS28YPL065W RPL24BP24000 155 aaKnown RBP2.89□□□□□ -1.95
VPS28YPL065W PPA2P28239 310 aa2.89□□□□□ -1.95
VPS28YPL065W FKS1P38631 1876 aaKnown RBP2.89□□□□□ -1.95
VPS28YPL065W TCD1P38756 429 aa2.89□□□□□ -1.95
VPS28YPL065W YHR125WP38831 101 aa2.89□□□□□ -1.95
VPS28YPL065W SMD3P43321 101 aaKnown RBP2.89□□□□□ -1.95
VPS28YPL065W GTR2P53290 341 aa2.89□□□□□ -1.95
VPS28YPL065W RUD3Q12234 484 aaKnown RBP2.89□□□□□ -1.95
VPS28YPL065W DSF1P0CX08 502 aa2.88□□□□□ -1.95
VPS28YPL065W YNR073CP0CX09 502 aa2.88□□□□□ -1.95
VPS28YPL065W YMR31P19955 123 aa2.88□□□□□ -1.95
VPS28YPL065W YHL026CP38740 315 aa2.88□□□□□ -1.95
VPS28YPL065W ARC15P40518 154 aaRIP-Chip data2.88□□□□□ -1.95not detected
VPS28YPL065W MSS2P40990 351 aa2.88□□□□□ -1.95
VPS28YPL065W CAT5P41735 233 aa2.88□□□□□ -1.95
VPS28YPL065W YPL257WQ08974 193 aa2.88□□□□□ -1.95
VPS28YPL065W HTL1Q9URQ5 78 aa2.88□□□□□ -1.95
VPS28YPL065W Q0255P03881 472 aa2.87□□□□□ -1.95
VPS28YPL065W BCY1P07278 416 aaKnown RBP2.87□□□□□ -1.95
VPS28YPL065W URA8P38627 578 aaPredicted RBP2.87□□□□□ -1.95
VPS28YPL065W RTC3P38804 111 aaPredicted RBP2.87□□□□□ -1.95
VPS28YPL065W MRPL49P40858 161 aaPredicted RBP2.87□□□□□ -1.95
VPS28YPL065W MCM22P47167 239 aa2.87□□□□□ -1.95
VPS28YPL065W NSA1P53136 463 aaPredicted RBP2.87□□□□□ -1.95
VPS28YPL065W COS6P53344 381 aa2.87□□□□□ -1.95
VPS28YPL065W COX5AP00424 153 aa2.86□□□□□ -1.95
VPS28YPL065W NHP6BP11633 99 aaKnown RBP2.86□□□□□ -1.95
VPS28YPL065W SCO1P23833 295 aa2.86□□□□□ -1.95
VPS28YPL065W RIB1P38066 345 aa2.86□□□□□ -1.95
VPS28YPL065W COX15P40086 486 aa2.86□□□□□ -1.95
VPS28YPL065W GCN20P43535 752 aaKnown RBP2.86□□□□□ -1.95
VPS28YPL065W RMR1P53060 241 aa2.86□□□□□ -1.95
VPS28YPL065W CDC123Q05791 360 aa2.86□□□□□ -1.95
VPS28YPL065W NIP7Q08962 181 aaKnown RBP2.86□□□□□ -1.95
VPS28YPL065W GIS3Q12418 502 aa2.86□□□□□ -1.95
VPS28YPL065W SNF6P18888 332 aa2.85□□□□□ -1.95
VPS28YPL065W CCA1P21269 546 aa2.85□□□□□ -1.95
VPS28YPL065W PBN1P25580 416 aa2.85□□□□□ -1.95
VPS28YPL065W YPT52P36018 234 aaKnown RBP2.85□□□□□ -1.95
VPS28YPL065W CTR2P38865 189 aa2.85□□□□□ -1.95
VPS28YPL065W PEX17P40155 199 aa2.85□□□□□ -1.95
VPS28YPL065W PRE6P40303 254 aaKnown RBP2.85□□□□□ -1.95
VPS28YPL065W FIS1P40515 155 aa2.85□□□□□ -1.95
VPS28YPL065W RPA43P46669 326 aa2.85□□□□□ -1.95
VPS28YPL065W SNX4P47057 423 aa2.85□□□□□ -1.95
VPS28YPL065W ALG13P53178 202 aa2.85□□□□□ -1.95
VPS28YPL065W TPO4Q12256 659 aa2.85□□□□□ -1.95
VPS28YPL065W SCM4P32564 187 aa2.84□□□□□ -1.95
VPS28YPL065W ILM1P47155 203 aa2.84□□□□□ -1.95
VPS28YPL065W ERV29P53337 310 aa2.84□□□□□ -1.95
VPS28YPL065W YKL183C-AQ3E765 70 aa2.84□□□□□ -1.95
VPS28YPL065W SEY1Q99287 776 aa2.84□□□□□ -1.95
VPS28YPL065W SPT3P06844 337 aa2.83□□□□□ -1.96
VPS28YPL065W COQ1P18900 473 aa2.83□□□□□ -1.96
VPS28YPL065W RPF1P38805 295 aaKnown RBP2.83□□□□□ -1.96
VPS28YPL065W ERG28P40030 148 aa2.83□□□□□ -1.96
VPS28YPL065W HAM1P47119 197 aaKnown RBP2.83□□□□□ -1.96
VPS28YPL065W MIC26P50087 233 aa2.83□□□□□ -1.96
VPS28YPL065W YMR279CQ03263 540 aa2.83□□□□□ -1.96
VPS28YPL065W ATG39Q06159 398 aa2.83□□□□□ -1.96
VPS28YPL065W FCY2P17064 533 aa2.82□□□□□ -1.96
VPS28YPL065W DOA4P32571 926 aa2.82□□□□□ -1.96
VPS28YPL065W SRY1P36007 326 aa2.82□□□□□ -1.96
VPS28YPL065W CBT1P36038 271 aaPredicted RBP2.82□□□□□ -1.96
VPS28YPL065W YAR068WP39564 161 aa2.82□□□□□ -1.96
VPS28YPL065W YML096WQ04489 525 aa2.82□□□□□ -1.96
VPS28YPL065W HEM25Q07534 307 aa2.82□□□□□ -1.96
VPS28YPL065W AKR2Q12013 749 aa2.82□□□□□ -1.96
VPS28YPL065W YOR020W-AQ3E824 90 aa2.82□□□□□ -1.96
VPS28YPL065W ADH3P07246 375 aaKnown RBP2.81□□□□□ -1.96
VPS28YPL065W YBR121C-AP0C5L4 52 aa2.81□□□□□ -1.96
VPS28YPL065W URA6P15700 204 aa2.81□□□□□ -1.96
VPS28YPL065W SSO1P32867 290 aa2.81□□□□□ -1.96
VPS28YPL065W YNL194CP40169 301 aa2.81□□□□□ -1.96
VPS28YPL065W DAN1P47178 298 aa2.81□□□□□ -1.96
VPS28YPL065W YGR026WP53217 278 aa2.81□□□□□ -1.96
VPS28YPL065W FYV6P53913 173 aa2.81□□□□□ -1.96
VPS28YPL065W CGI121Q03705 181 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 57.7 ms