RNA–Protein interactions for RNA: YOL004W

SIN3, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene SIN3, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIN3YOL004W ATG26Q06321 1198 aa2.42□□□□□ -2.02
SIN3YOL004W JLP1Q12358 412 aa2.42□□□□□ -2.02
SIN3YOL004W RPL22AP05749 121 aaKnown RBP2.42□□□□□ -2.02
SIN3YOL004W URE2P23202 354 aaKnown RBP2.42□□□□□ -2.02
SIN3YOL004W RNQ1P25367 405 aa2.42□□□□□ -2.02
SIN3YOL004W ALK2P32789 676 aaPredicted RBP2.42□□□□□ -2.02
SIN3YOL004W RPC34P32910 317 aa2.42□□□□□ -2.02
SIN3YOL004W SRP102P36057 244 aaPredicted RBP2.42□□□□□ -2.02
SIN3YOL004W SHG1P38337 142 aa2.42□□□□□ -2.02
SIN3YOL004W HAT2P39984 401 aa2.42□□□□□ -2.02
SIN3YOL004W PHO86P46956 311 aa2.42□□□□□ -2.02
SIN3YOL004W CPD1P53314 239 aa2.42□□□□□ -2.02
SIN3YOL004W PEX10Q05568 337 aa2.42□□□□□ -2.02
SIN3YOL004W CTR3Q06686 241 aa2.42□□□□□ -2.02
SIN3YOL004W TAD3Q9URQ3 322 aa2.42□□□□□ -2.02
SIN3YOL004W CYC7P00045 113 aa2.42□□□□□ -2.02
SIN3YOL004W DBR1P24309 405 aaKnown RBP2.42□□□□□ -2.02
SIN3YOL004W INO2P26798 304 aa2.42□□□□□ -2.02
SIN3YOL004W SNC1P31109 117 aa2.42□□□□□ -2.02
SIN3YOL004W MIC12P38341 106 aa2.42□□□□□ -2.02
SIN3YOL004W SAS2P40963 338 aa2.42□□□□□ -2.02
SIN3YOL004W RPL10P41805 221 aaKnown RBP2.42□□□□□ -2.02
SIN3YOL004W RPA43P46669 326 aa2.42□□□□□ -2.02
SIN3YOL004W TMA22P47089 198 aaPredicted RBP2.42□□□□□ -2.02
SIN3YOL004W YMR099CQ03161 297 aaKnown RBP2.42□□□□□ -2.02
SIN3YOL004W RPB5P20434 215 aa2.41□□□□□ -2.02
SIN3YOL004W HYR1P40581 163 aaKnown RBP2.41□□□□□ -2.02
SIN3YOL004W EGT2P42835 1041 aa2.41□□□□□ -2.02
SIN3YOL004W PXR1P53335 271 aaPredicted RBP2.41□□□□□ -2.02
SIN3YOL004W SPR6Q01684 191 aa2.41□□□□□ -2.02
SIN3YOL004W API2Q04413 109 aa2.41□□□□□ -2.02
SIN3YOL004W SWC7Q06707 132 aa2.41□□□□□ -2.02
SIN3YOL004W PBP4Q07362 185 aaKnown RBP2.41□□□□□ -2.02
SIN3YOL004W NIP7Q08962 181 aaKnown RBP2.41□□□□□ -2.02
SIN3YOL004W YPL162CQ12042 273 aa2.41□□□□□ -2.02
SIN3YOL004W ZWF1P11412 505 aaKnown RBP2.41□□□□□ -2.02
SIN3YOL004W YAP1P19880 650 aaKnown RBP2.41□□□□□ -2.02
SIN3YOL004W PHO13P19881 312 aa2.41□□□□□ -2.02
SIN3YOL004W PUB1P32588 453 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
SIN3YOL004W SPC1P46965 94 aa2.41□□□□□ -2.02
SIN3YOL004W CAF40P53829 373 aa2.41□□□□□ -2.02
SIN3YOL004W ERG5P54781 538 aa2.41□□□□□ -2.02
SIN3YOL004W GRH1Q04410 372 aaKnown RBP2.41□□□□□ -2.02
SIN3YOL004W YDR222WQ04925 415 aa2.41□□□□□ -2.02
SIN3YOL004W FOL3Q12676 427 aaPredicted RBP2.41□□□□□ -2.02
SIN3YOL004W QCR7P00128 127 aa2.41□□□□□ -2.02
SIN3YOL004W AMD2P22580 549 aa2.41□□□□□ -2.02
SIN3YOL004W EHD3P28817 500 aa2.41□□□□□ -2.02
SIN3YOL004W ZUO1P32527 433 aaKnown RBP2.41□□□□□ -2.02
SIN3YOL004W DDI1P40087 428 aa2.41□□□□□ -2.02
SIN3YOL004W DFG10P40526 253 aa2.41□□□□□ -2.02
SIN3YOL004W ALG13P53178 202 aa2.41□□□□□ -2.02
SIN3YOL004W FAR8Q05040 523 aa2.41□□□□□ -2.02
SIN3YOL004W RIO1Q12196 484 aaKnown RBP2.41□□□□□ -2.02
SIN3YOL004W HMS1Q12398 434 aa2.41□□□□□ -2.02
SIN3YOL004W TRP4P07285 380 aaPredicted RBP2.41□□□□□ -2.02
SIN3YOL004W UTR5P32630 166 aa2.41□□□□□ -2.02
SIN3YOL004W RPS27AP35997 82 aaKnown RBP2.41□□□□□ -2.02
SIN3YOL004W RPS27BP38711 82 aa2.41□□□□□ -2.02
SIN3YOL004W BDH2P39713 417 aa2.41□□□□□ -2.02
SIN3YOL004W YJL043WP47053 257 aa2.41□□□□□ -2.02
SIN3YOL004W DIA1P54005 336 aa2.41□□□□□ -2.02
SIN3YOL004W OST6Q03723 332 aa2.41□□□□□ -2.02
SIN3YOL004W ASA1Q06822 443 aa2.41□□□□□ -2.02
SIN3YOL004W HEM25Q07534 307 aa2.41□□□□□ -2.02
SIN3YOL004W NUF2P33895 451 aa2.4□□□□□ -2.02
SIN3YOL004W COS9P36034 407 aa2.4□□□□□ -2.02
SIN3YOL004W TCM62P38228 572 aaKnown RBP2.4□□□□□ -2.02
SIN3YOL004W FES1P38260 290 aa2.4□□□□□ -2.02
SIN3YOL004W CHL4P38907 458 aa2.4□□□□□ -2.02
SIN3YOL004W CIN5P40917 295 aa2.4□□□□□ -2.02
SIN3YOL004W YNL320WP42840 284 aa2.4□□□□□ -2.02
SIN3YOL004W PKP2P53170 491 aa2.4□□□□□ -2.02
SIN3YOL004W YNL234WP53857 426 aa2.4□□□□□ -2.02
SIN3YOL004W SGF11Q03067 99 aa2.4□□□□□ -2.02
SIN3YOL004W TDA1Q03533 586 aa2.4□□□□□ -2.02
SIN3YOL004W SWF1Q04629 336 aa2.4□□□□□ -2.02
SIN3YOL004W ASR1Q06834 288 aa2.4□□□□□ -2.02
SIN3YOL004W MCH4Q08268 501 aa2.4□□□□□ -2.02
SIN3YOL004W YDL109CQ12103 647 aa2.4□□□□□ -2.02
SIN3YOL004W YLR111WQ12528 110 aa2.4□□□□□ -2.02
SIN3YOL004W KTI11Q3E840 82 aa2.4□□□□□ -2.02
SIN3YOL004W YMR31P19955 123 aa2.4□□□□□ -2.03
SIN3YOL004W PRP21P32524 280 aaPredicted RBP2.4□□□□□ -2.03
SIN3YOL004W ATG7P38862 630 aa2.4□□□□□ -2.03
SIN3YOL004W YFL067WP43537 175 aa2.4□□□□□ -2.03
SIN3YOL004W SNO3P43544 222 aa2.4□□□□□ -2.03
SIN3YOL004W PCP1P53259 346 aa2.4□□□□□ -2.03
SIN3YOL004W MAK3Q03503 176 aa2.4□□□□□ -2.03
SIN3YOL004W RDL2Q08742 149 aaKnown RBP2.4□□□□□ -2.03
SIN3YOL004W YPL199CQ08954 240 aa2.4□□□□□ -2.03
SIN3YOL004W TPT1Q12272 230 aaKnown RBP2.4□□□□□ -2.03
SIN3YOL004W ATG31Q12421 196 aa2.4□□□□□ -2.03
SIN3YOL004W SET6Q12529 373 aa2.4□□□□□ -2.03
SIN3YOL004W NAT2P37293 288 aa2.4□□□□□ -2.03
SIN3YOL004W RCK2P38623 610 aa2.4□□□□□ -2.03
SIN3YOL004W YHR035WP38769 630 aa2.4□□□□□ -2.03
SIN3YOL004W RPS29AP41057 56 aaKnown RBP2.4□□□□□ -2.03
SIN3YOL004W YJL163CP46996 555 aa2.4□□□□□ -2.03
SIN3YOL004W RRN9P53437 365 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms