RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C YKR104WP0CE69 306 aa0.37□□□□□ -2.35
VPS20YMR077C DDI1P40087 428 aa0.37□□□□□ -2.35
VPS20YMR077C FIS1P40515 155 aa0.37□□□□□ -2.35
VPS20YMR077C GTR2P53290 341 aa0.37□□□□□ -2.35
VPS20YMR077C YMR007WQ03675 126 aa0.37□□□□□ -2.35
VPS20YMR077C OST6Q03723 332 aa0.37□□□□□ -2.35
VPS20YMR077C ATG39Q06159 398 aa0.37□□□□□ -2.35
VPS20YMR077C RRP40Q08285 240 aaKnown RBP0.37□□□□□ -2.35
VPS20YMR077C MRPL23Q12487 163 aaPredicted RBP0.37□□□□□ -2.35
VPS20YMR077C SNA3P14359 133 aa0.36□□□□□ -2.35
VPS20YMR077C QRI5P32344 111 aa0.36□□□□□ -2.35
VPS20YMR077C MRX3P38172 270 aa0.36□□□□□ -2.35
VPS20YMR077C SNZ3P43545 298 aa0.36□□□□□ -2.35
VPS20YMR077C TOS8P53147 276 aa0.36□□□□□ -2.35
VPS20YMR077C ATG17Q06410 417 aa0.36□□□□□ -2.35
VPS20YMR077C HEM25Q07534 307 aa0.36□□□□□ -2.35
VPS20YMR077C HIS1P00498 297 aaKnown RBP0.35□□□□□ -2.35
VPS20YMR077C YPT52P36018 234 aaKnown RBP0.35□□□□□ -2.35
VPS20YMR077C RPL33BP41056 107 aaKnown RBP0.35□□□□□ -2.35
VPS20YMR077C GMC2Q06201 188 aa0.35□□□□□ -2.35
VPS20YMR077C YPL162CQ12042 273 aa0.35□□□□□ -2.35
VPS20YMR077C OPI1P21957 404 aa0.34□□□□□ -2.36
VPS20YMR077C VPS3P23643 1011 aa0.34□□□□□ -2.36
VPS20YMR077C YKL070WP36087 169 aa0.34□□□□□ -2.36
VPS20YMR077C MRPL40P36534 297 aa0.34□□□□□ -2.36
VPS20YMR077C YAR068WP39564 161 aa0.34□□□□□ -2.36
VPS20YMR077C RMR1P53060 241 aa0.34□□□□□ -2.36
VPS20YMR077C YPR172WQ06608 200 aa0.34□□□□□ -2.36
VPS20YMR077C COQ10Q08058 207 aa0.34□□□□□ -2.36
VPS20YMR077C RRS1Q08746 203 aaKnown RBP0.34□□□□□ -2.36
VPS20YMR077C YPL257WQ08974 193 aa0.34□□□□□ -2.36
VPS20YMR077C SNF8Q12483 233 aa0.34□□□□□ -2.36
VPS20YMR077C EHD3P28817 500 aa0.33□□□□□ -2.36
VPS20YMR077C FZF1P32805 299 aa0.33□□□□□ -2.36
VPS20YMR077C UBC7Q02159 165 aa0.33□□□□□ -2.36
VPS20YMR077C SPG4Q04438 115 aa0.33□□□□□ -2.36
VPS20YMR077C YPR098CQ06089 161 aa0.33□□□□□ -2.36
VPS20YMR077C YLR413WQ06689 675 aa0.33□□□□□ -2.36
VPS20YMR077C YOR186WQ08560 144 aa0.33□□□□□ -2.36
VPS20YMR077C SGE1P33335 543 aa0.32□□□□□ -2.36
VPS20YMR077C JEN1P36035 616 aa0.32□□□□□ -2.36
VPS20YMR077C MRPL39P36533 70 aa0.32□□□□□ -2.36
VPS20YMR077C YER076CP40049 302 aa0.32□□□□□ -2.36
VPS20YMR077C ICE2P40499 491 aa0.32□□□□□ -2.36
VPS20YMR077C TIR3P40552 269 aa0.32□□□□□ -2.36
VPS20YMR077C YJR056CP47115 236 aa0.32□□□□□ -2.36
VPS20YMR077C BOL2P53082 120 aa0.32□□□□□ -2.36
VPS20YMR077C SNZ2P53824 298 aa0.32□□□□□ -2.36
VPS20YMR077C NIP7Q08962 181 aaKnown RBP0.32□□□□□ -2.36
VPS20YMR077C MET5P47169 1442 aa0.31□□□□□ -2.36
VPS20YMR077C IPP1P00817 287 aaKnown RBP0.31□□□□□ -2.36
VPS20YMR077C NSP1P14907 823 aaKnown RBP0.31□□□□□ -2.36
VPS20YMR077C MEI4P29467 408 aa0.31□□□□□ -2.36
VPS20YMR077C TMA19P35691 167 aaKnown RBP0.31□□□□□ -2.36
VPS20YMR077C GOS1P38736 223 aa0.31□□□□□ -2.36
VPS20YMR077C SMB1P40018 196 aaKnown RBP0.31□□□□□ -2.36
VPS20YMR077C THO1P40040 218 aaKnown RBP0.31□□□□□ -2.36
VPS20YMR077C RPA43P46669 326 aa0.31□□□□□ -2.36
VPS20YMR077C TPO4Q12256 659 aa0.31□□□□□ -2.36
VPS20YMR077C HTL1Q9URQ5 78 aa0.31□□□□□ -2.36
VPS20YMR077C MSB2P32334 1306 aa0.31□□□□□ -2.36
VPS20YMR077C CYR1P08678 2026 aaKnown RBP0.3□□□□□ -2.36
VPS20YMR077C YBR056W-AI2HB52 66 aa0.3□□□□□ -2.36
VPS20YMR077C SSA3P09435 649 aaKnown RBP0.3□□□□□ -2.36
VPS20YMR077C KRR1P25586 316 aaPredicted RBP0.3□□□□□ -2.36
VPS20YMR077C YBR096WP38256 230 aa0.3□□□□□ -2.36
VPS20YMR077C PRS2P38620 318 aaKnown RBP0.3□□□□□ -2.36
VPS20YMR077C KAP114P53067 1004 aa0.3□□□□□ -2.36
VPS20YMR077C SPG3Q04398 127 aaPredicted RBP0.3□□□□□ -2.36
VPS20YMR077C RSR1P13856 272 aa0.29□□□□□ -2.36
VPS20YMR077C FCY2P17064 533 aa0.29□□□□□ -2.36
VPS20YMR077C DBP3P20447 523 aaKnown RBP0.29□□□□□ -2.36
VPS20YMR077C ECM33P38248 429 aaKnown RBP0.29□□□□□ -2.36
VPS20YMR077C RPF1P38805 295 aaKnown RBP0.29□□□□□ -2.36
VPS20YMR077C YNL217WP40152 326 aa0.29□□□□□ -2.36
VPS20YMR077C PGD1P40356 397 aa0.29□□□□□ -2.36
VPS20YMR077C RHO3Q00245 231 aaKnown RBP0.29□□□□□ -2.36
VPS20YMR077C YDR209CQ03480 137 aa0.29□□□□□ -2.36
VPS20YMR077C YCT1Q12235 531 aa0.29□□□□□ -2.36
VPS20YMR077C CDC8P00572 216 aa0.28□□□□□ -2.36
VPS20YMR077C RPL27BP0C2H7 136 aaKnown RBP0.28□□□□□ -2.36
VPS20YMR077C AQY2P0CD90 149 aa0.28□□□□□ -2.36
VPS20YMR077C MRP1P10662 321 aaKnown RBP0.28□□□□□ -2.36
VPS20YMR077C HOM6P31116 359 aaKnown RBP0.28□□□□□ -2.36
VPS20YMR077C GAA1P39012 614 aa0.28□□□□□ -2.36
VPS20YMR077C YEL067CP39978 195 aa0.28□□□□□ -2.36
VPS20YMR077C RIO2P40160 425 aaKnown RBP0.28□□□□□ -2.36
VPS20YMR077C YNL046WP53956 172 aa0.28□□□□□ -2.36
VPS20YMR077C COX20Q04935 205 aa0.28□□□□□ -2.36
VPS20YMR077C ANT1Q06497 328 aa0.28□□□□□ -2.36
VPS20YMR077C MSA1Q08471 629 aa0.28□□□□□ -2.36
VPS20YMR077C YIL002W-AQ3E7Z5 69 aa0.28□□□□□ -2.36
VPS20YMR077C YOR020W-AQ3E824 90 aa0.28□□□□□ -2.36
VPS20YMR077C COX2P00410 251 aa0.27□□□□□ -2.37
VPS20YMR077C YRB2P40517 327 aa0.27□□□□□ -2.37
VPS20YMR077C HAM1P47119 197 aaKnown RBP0.27□□□□□ -2.37
VPS20YMR077C GPI8P49018 411 aa0.27□□□□□ -2.37
VPS20YMR077C AIF1P52923 378 aa0.27□□□□□ -2.37
VPS20YMR077C USE1P53146 245 aa0.27□□□□□ -2.37
VPS20YMR077C ALG11P53954 548 aaKnown RBP0.27□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 115.4 ms