RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	YLR438C-A	YOR186W	Q08560	144 aa		10.88	□□□□□ -0.67
LSM3	YLR438C-A	FSH3	Q99369	266 aa		10.88	□□□□□ -0.67
LSM3	YLR438C-A	RPL3	P14126	387 aa	Known RBP	10.87	□□□□□ -0.67
LSM3	YLR438C-A	CDC23	P16522	626 aa		10.87	□□□□□ -0.67
LSM3	YLR438C-A	YCR101C	P25607	182 aa		10.87	□□□□□ -0.67
LSM3	YLR438C-A	SPC29	P33419	253 aa		10.87	□□□□□ -0.67
LSM3	YLR438C-A	YER121W	P40076	114 aa		10.87	□□□□□ -0.67
LSM3	YLR438C-A	QRI1	P43123	477 aa	Known RBP	10.87	□□□□□ -0.67
LSM3	YLR438C-A	RSM27	P53305	110 aa		10.87	□□□□□ -0.67
LSM3	YLR438C-A	SED1	Q01589	338 aa		10.87	□□□□□ -0.67
LSM3	YLR438C-A	YMR254C	Q04838	102 aa		10.87	□□□□□ -0.67
LSM3	YLR438C-A	FCY22	Q12119	530 aa		10.87	□□□□□ -0.67
LSM3	YLR438C-A	RDI1	Q12434	202 aa		10.87	□□□□□ -0.67
LSM3	YLR438C-A	RPS31	P05759	152 aa	Known RBP	10.86	□□□□□ -0.67
LSM3	YLR438C-A	YML003W	P0CF16	290 aa		10.86	□□□□□ -0.67
LSM3	YLR438C-A	HNM1	P19807	563 aa		10.86	□□□□□ -0.67
LSM3	YLR438C-A	RNA14	P25298	677 aa	Known RBP	10.86	□□□□□ -0.67
LSM3	YLR438C-A	MRPL36	P36531	177 aa		10.86	□□□□□ -0.67
LSM3	YLR438C-A	YBR242W	P38331	238 aa		10.86	□□□□□ -0.67
LSM3	YLR438C-A	TAF4	P50105	388 aa		10.86	□□□□□ -0.67
LSM3	YLR438C-A	ARG5,6	Q01217	863 aa		10.86	□□□□□ -0.67
LSM3	YLR438C-A	TY1A-DR2	Q03964	440 aa	Known RBP	10.86	□□□□□ -0.67
LSM3	YLR438C-A	YTH1	Q06102	208 aa	Predicted RBP	10.86	□□□□□ -0.67
LSM3	YLR438C-A	PML1	Q07930	204 aa	Predicted RBP	10.86	□□□□□ -0.67
LSM3	YLR438C-A	DAL80	P26343	269 aa		10.85	□□□□□ -0.67
LSM3	YLR438C-A	ECM14	P38836	430 aa		10.85	□□□□□ -0.67
LSM3	YLR438C-A	YCK3	P39962	524 aa		10.85	□□□□□ -0.67
LSM3	YLR438C-A	YPL067C	Q02754	198 aa		10.85	□□□□□ -0.67
LSM3	YLR438C-A	YMR279C	Q03263	540 aa		10.85	□□□□□ -0.67
LSM3	YLR438C-A	GAT3	Q07928	141 aa		10.85	□□□□□ -0.67
LSM3	YLR438C-A	PET122	P10355	254 aa		10.84	□□□□□ -0.67
LSM3	YLR438C-A	RFA1	P22336	621 aa	Known RBP	10.84	□□□□□ -0.67
LSM3	YLR438C-A	YCP4	P25349	247 aa	Known RBP	10.84	□□□□□ -0.67
LSM3	YLR438C-A	ERG3	P32353	365 aa		10.84	□□□□□ -0.67
LSM3	YLR438C-A	MRPL3	P36516	390 aa		10.84	□□□□□ -0.67
LSM3	YLR438C-A	MID1	P41821	548 aa		10.84	□□□□□ -0.67
LSM3	YLR438C-A	PRM15	Q03262	622 aa		10.84	□□□□□ -0.67
LSM3	YLR438C-A	YML018C	Q03730	393 aa		10.84	□□□□□ -0.67
LSM3	YLR438C-A	IFM1	P25038	676 aa		10.83	□□□□□ -0.68
LSM3	YLR438C-A	MNS1	P32906	549 aa		10.83	□□□□□ -0.68
LSM3	YLR438C-A	YKL187C	P34231	750 aa		10.83	□□□□□ -0.68
LSM3	YLR438C-A	OSH7	P38755	437 aa		10.83	□□□□□ -0.68
LSM3	YLR438C-A	MRX5	P47007	382 aa		10.83	□□□□□ -0.68
LSM3	YLR438C-A	PEX4	P29340	183 aa		10.82	□□□□□ -0.68
LSM3	YLR438C-A	SHM2	P37291	469 aa	Known RBP	10.82	□□□□□ -0.68
LSM3	YLR438C-A	PRS2	P38620	318 aa	Known RBP	10.82	□□□□□ -0.68
LSM3	YLR438C-A	GAT2	P40209	560 aa		10.82	□□□□□ -0.68
LSM3	YLR438C-A	YJR011C	P47086	261 aa	Predicted RBP	10.82	□□□□□ -0.68
LSM3	YLR438C-A	GPG1	P53130	126 aa		10.82	□□□□□ -0.68
LSM3	YLR438C-A	ALG9	P53868	555 aa	Known RBP	10.82	□□□□□ -0.68
LSM3	YLR438C-A	GRC3	Q07845	632 aa		10.82	□□□□□ -0.68
LSM3	YLR438C-A	SCM3	Q12334	223 aa		10.82	□□□□□ -0.68
LSM3	YLR438C-A	WHI5	Q12416	295 aa		10.82	□□□□□ -0.68
LSM3	YLR438C-A	ATG40	Q99325	256 aa		10.82	□□□□□ -0.68
LSM3	YLR438C-A	AAC1	P04710	309 aa		10.81	□□□□□ -0.68
LSM3	YLR438C-A	RAD52	P06778	471 aa	Known RBP	10.81	□□□□□ -0.68
LSM3	YLR438C-A	DIT1	P21623	536 aa		10.81	□□□□□ -0.68
LSM3	YLR438C-A	IMP1	P28627	190 aa		10.81	□□□□□ -0.68
LSM3	YLR438C-A	LNP1	P38878	278 aa		10.81	□□□□□ -0.68
LSM3	YLR438C-A	LSM1	P47017	172 aa	Known RBP	10.81	□□□□□ -0.68
LSM3	YLR438C-A	GMC1	Q04399	608 aa		10.81	□□□□□ -0.68
LSM3	YLR438C-A	YLR108C	Q12259	485 aa		10.81	□□□□□ -0.68
LSM3	YLR438C-A	ACH1	P32316	526 aa		10.8	□□□□□ -0.68
LSM3	YLR438C-A	YOX1	P34161	385 aa		10.8	□□□□□ -0.68
LSM3	YLR438C-A	MRPL27	P36526	146 aa	Predicted RBP	10.8	□□□□□ -0.68
LSM3	YLR438C-A	FIG1	P38224	298 aa		10.8	□□□□□ -0.68
LSM3	YLR438C-A	CCS1	P40202	249 aa	Known RBP	10.8	□□□□□ -0.68
LSM3	YLR438C-A	GWT1	P47026	490 aa		10.8	□□□□□ -0.68
LSM3	YLR438C-A	YNL046W	P53956	172 aa		10.8	□□□□□ -0.68
LSM3	YLR438C-A	UPS1	Q05776	175 aa		10.8	□□□□□ -0.68
LSM3	YLR438C-A	LIP2	Q06005	328 aa		10.8	□□□□□ -0.68
LSM3	YLR438C-A	YOR385W	Q08909	290 aa		10.8	□□□□□ -0.68
LSM3	YLR438C-A	WSC3	Q12215	556 aa		10.8	□□□□□ -0.68
LSM3	YLR438C-A	MPD1	Q12404	318 aa	Known RBP	10.8	□□□□□ -0.68
LSM3	YLR438C-A	RPL39	P04650	51 aa		10.79	□□□□□ -0.68
LSM3	YLR438C-A	YLL053C	P0CD98	152 aa		10.79	□□□□□ -0.68
LSM3	YLR438C-A	PAN3	P36102	679 aa	Predicted RBP	10.79	□□□□□ -0.68
LSM3	YLR438C-A	YHL044W	P38727	235 aa		10.79	□□□□□ -0.68
LSM3	YLR438C-A	RMD6	P39975	231 aa		10.79	□□□□□ -0.68
LSM3	YLR438C-A	BNA2	P47125	453 aa		10.79	□□□□□ -0.68
LSM3	YLR438C-A	GTF1	P53260	183 aa	Predicted RBP	10.79	□□□□□ -0.68
LSM3	YLR438C-A	ENV7	Q12003	364 aa		10.79	□□□□□ -0.68
LSM3	YLR438C-A	PET20	Q99373	253 aa		10.79	□□□□□ -0.68
LSM3	YLR438C-A	TRA1	P38811	3744 aa		10.79	□□□□□ -0.68
LSM3	YLR438C-A	NHP6B	P11633	99 aa	Known RBP	10.78	□□□□□ -0.68
LSM3	YLR438C-A	HNT2	P49775	206 aa		10.78	□□□□□ -0.68
LSM3	YLR438C-A	MRPL13	Q02204	264 aa		10.78	□□□□□ -0.68
LSM3	YLR438C-A	SPO24	Q3E752	67 aa		10.78	□□□□□ -0.68
LSM3	YLR438C-A	URA3	P03962	267 aa		10.77	□□□□□ -0.69
LSM3	YLR438C-A	YBR197C	P38306	217 aa		10.77	□□□□□ -0.69
LSM3	YLR438C-A	SBH2	P52871	88 aa		10.77	□□□□□ -0.69
LSM3	YLR438C-A	SLX9	P53251	210 aa	Predicted RBP	10.77	□□□□□ -0.69
LSM3	YLR438C-A	MRPS16	Q02608	121 aa		10.77	□□□□□ -0.69
LSM3	YLR438C-A	MED4	Q12343	284 aa		10.77	□□□□□ -0.69
LSM3	YLR438C-A	TRM13	Q12383	476 aa		10.77	□□□□□ -0.69
LSM3	YLR438C-A	GCN3	P14741	305 aa		10.76	□□□□□ -0.69
LSM3	YLR438C-A	SAR1	P20606	190 aa	Known RBP	10.76	□□□□□ -0.69
LSM3	YLR438C-A	CPR4	P25334	318 aa		10.76	□□□□□ -0.69
LSM3	YLR438C-A	ATG22	P25568	528 aa		10.76	□□□□□ -0.69
LSM3	YLR438C-A	BUD23	P25627	275 aa	Predicted RBP	10.76	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 23 ms