RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W CAX4P53223 239 aa3.79□□□□□ -1.8
VPS36YLR417W SWP1Q02795 286 aa3.79□□□□□ -1.8
VPS36YLR417W YPL119C-AQ3E751 87 aa3.79□□□□□ -1.8
VPS36YLR417W FLO11P08640 1367 aa3.79□□□□□ -1.8
VPS36YLR417W YLR462WO13556 202 aa3.78□□□□□ -1.8
VPS36YLR417W MATALPHA1P0CY06 175 aa3.78□□□□□ -1.8
VPS36YLR417W HMLALPHA1P0CY07 175 aa3.78□□□□□ -1.8
VPS36YLR417W PHO80P20052 293 aa3.78□□□□□ -1.8
VPS36YLR417W RPB4P20433 221 aaPredicted RBP3.78□□□□□ -1.8
VPS36YLR417W AST1P35183 429 aa3.78□□□□□ -1.8
VPS36YLR417W YHL049CP38722 271 aa3.78□□□□□ -1.8
VPS36YLR417W YEL075CP39972 122 aa3.78□□□□□ -1.8
VPS36YLR417W YER189WP40104 122 aa3.78□□□□□ -1.8
VPS36YLR417W HOC1P47124 396 aa3.78□□□□□ -1.8
VPS36YLR417W YNL247WP53852 767 aaKnown RBP3.78□□□□□ -1.8
VPS36YLR417W FMP41P53889 259 aaKnown RBP3.78□□□□□ -1.8
VPS36YLR417W YNL095CP53932 642 aa3.78□□□□□ -1.8
VPS36YLR417W PLP1Q04004 230 aa3.78□□□□□ -1.8
VPS36YLR417W YPR172WQ06608 200 aa3.78□□□□□ -1.8
VPS36YLR417W CMD1P06787 147 aaKnown RBP3.78□□□□□ -1.8
VPS36YLR417W MAK31P23059 88 aa3.78□□□□□ -1.8
VPS36YLR417W MID2P36027 376 aa3.78□□□□□ -1.8
VPS36YLR417W JEN1P36035 616 aa3.78□□□□□ -1.8
VPS36YLR417W YHI9P38765 294 aa3.78□□□□□ -1.8
VPS36YLR417W USE1P53146 245 aa3.78□□□□□ -1.8
VPS36YLR417W GIS2P53849 153 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
VPS36YLR417W NOP13P53883 403 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
VPS36YLR417W ASI3P53983 676 aa3.78□□□□□ -1.8
VPS36YLR417W FMN1Q03778 218 aa3.78□□□□□ -1.8
VPS36YLR417W SOD1P00445 154 aaKnown RBP3.77□□□□□ -1.81
VPS36YLR417W FUS3P16892 353 aaKnown RBP3.77□□□□□ -1.81
VPS36YLR417W COQ1P18900 473 aa3.77□□□□□ -1.81
VPS36YLR417W HSP30P25619 332 aa3.77□□□□□ -1.81
VPS36YLR417W MRX8Q05473 314 aa3.77□□□□□ -1.81
VPS36YLR417W SPO77Q06134 477 aa3.77□□□□□ -1.81
VPS36YLR417W UIP4Q08926 304 aa3.77□□□□□ -1.81
VPS36YLR417W YCT1Q12235 531 aa3.77□□□□□ -1.81
VPS36YLR417W POX1P13711 748 aa3.76□□□□□ -1.81
VPS36YLR417W YAK1P14680 807 aa3.76□□□□□ -1.81
VPS36YLR417W DOA4P32571 926 aa3.76□□□□□ -1.81
VPS36YLR417W YBR032WP38223 100 aa3.76□□□□□ -1.81
VPS36YLR417W PHO89P38361 574 aa3.76□□□□□ -1.81
VPS36YLR417W BDH1P39714 382 aa3.76□□□□□ -1.81
VPS36YLR417W THO1P40040 218 aaKnown RBP3.76□□□□□ -1.81
VPS36YLR417W SYS1P41544 203 aa3.76□□□□□ -1.81
VPS36YLR417W UFD1P53044 361 aa3.76□□□□□ -1.81
VPS36YLR417W YDL211CQ12121 372 aa3.76□□□□□ -1.81
VPS36YLR417W RFM1Q12192 310 aa3.76□□□□□ -1.81
VPS36YLR417W TCP1P12612 559 aaKnown RBP3.75□□□□□ -1.81
VPS36YLR417W KSS1P14681 368 aa3.75□□□□□ -1.81
VPS36YLR417W NMT1P14743 455 aa3.75□□□□□ -1.81
VPS36YLR417W RPL24BP24000 155 aaKnown RBP3.75□□□□□ -1.81
VPS36YLR417W ERG2P32352 222 aa3.75□□□□□ -1.81
VPS36YLR417W RCN1P36054 211 aa3.75□□□□□ -1.81
VPS36YLR417W YBR242WP38331 238 aa3.75□□□□□ -1.81
VPS36YLR417W YHL044WP38727 235 aa3.75□□□□□ -1.81
VPS36YLR417W PGA2P53903 129 aa3.75□□□□□ -1.81
VPS36YLR417W SMD1Q02260 146 aaPredicted RBP3.75□□□□□ -1.81
VPS36YLR417W NNT1Q05874 261 aa3.75□□□□□ -1.81
VPS36YLR417W SSQ1Q05931 657 aaPredicted RBP3.75□□□□□ -1.81
VPS36YLR417W SNU23Q12368 194 aaPredicted RBP3.75□□□□□ -1.81
VPS36YLR417W TFC1P32367 649 aa3.75□□□□□ -1.81
VPS36YLR417W HMT1P38074 348 aa3.75□□□□□ -1.81
VPS36YLR417W FCY21P40039 528 aa3.75□□□□□ -1.81
VPS36YLR417W JHD2P47156 728 aaPredicted RBP3.75□□□□□ -1.81
VPS36YLR417W SLX9P53251 210 aaPredicted RBP3.75□□□□□ -1.81
VPS36YLR417W ECM11Q04110 302 aa3.75□□□□□ -1.81
VPS36YLR417W YMR226CQ05016 267 aaKnown RBP3.75□□□□□ -1.81
VPS36YLR417W PEX10Q05568 337 aa3.75□□□□□ -1.81
VPS36YLR417W FUS2Q05670 677 aa3.75□□□□□ -1.81
VPS36YLR417W YPR098CQ06089 161 aa3.75□□□□□ -1.81
VPS36YLR417W DXO1Q06349 442 aa3.75□□□□□ -1.81
VPS36YLR417W CPT1P17898 393 aa3.74□□□□□ -1.81
VPS36YLR417W PPA2P28239 310 aa3.74□□□□□ -1.81
VPS36YLR417W EHD3P28817 500 aa3.74□□□□□ -1.81
VPS36YLR417W POP4P38336 279 aa3.74□□□□□ -1.81
VPS36YLR417W YHB1P39676 399 aaKnown RBP3.74□□□□□ -1.81
VPS36YLR417W FLC3P53121 802 aa3.74□□□□□ -1.81
VPS36YLR417W SWT21P53873 357 aaPredicted RBP3.74□□□□□ -1.81
VPS36YLR417W RRS1Q08746 203 aaKnown RBP3.74□□□□□ -1.81
VPS36YLR417W EMP46Q12396 444 aa3.74□□□□□ -1.81
VPS36YLR417W SSO1P32867 290 aa3.73□□□□□ -1.81
VPS36YLR417W ETR1P38071 380 aa3.73□□□□□ -1.81
VPS36YLR417W GOS1P38736 223 aa3.73□□□□□ -1.81
VPS36YLR417W TRR2P38816 342 aa3.73□□□□□ -1.81
VPS36YLR417W COQ10Q08058 207 aa3.73□□□□□ -1.81
VPS36YLR417W ADF1Q2V2Q1 113 aa3.73□□□□□ -1.81
VPS36YLR417W TY1B-NL2Q99337 1749 aaKnown RBP3.73□□□□□ -1.81
VPS36YLR417W ARG80P07249 177 aa3.73□□□□□ -1.81
VPS36YLR417W CUP2P15315 225 aa3.73□□□□□ -1.81
VPS36YLR417W YBR096WP38256 230 aa3.73□□□□□ -1.81
VPS36YLR417W TRM5P38793 499 aa3.73□□□□□ -1.81
VPS36YLR417W RPE1P46969 238 aa3.73□□□□□ -1.81
VPS36YLR417W RCF2P53721 224 aa3.73□□□□□ -1.81
VPS36YLR417W AAH1P53909 347 aa3.73□□□□□ -1.81
VPS36YLR417W OSH6Q02201 448 aa3.73□□□□□ -1.81
VPS36YLR417W CTF19Q02732 369 aa3.73□□□□□ -1.81
VPS36YLR417W GTO3Q04806 366 aa3.73□□□□□ -1.81
VPS36YLR417W ATG38Q05789 226 aaKnown RBP3.73□□□□□ -1.81
VPS36YLR417W PLB3Q08108 686 aa3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms