RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C ERP4Q12450 207 aa8.59□□□□□ -1.03
SHB17YKR043C SUS1Q6WNK7 96 aa8.59□□□□□ -1.03
SHB17YKR043C RPL25P04456 142 aaKnown RBP8.58□□□□□ -1.04
SHB17YKR043C LNP1P38878 278 aa8.58□□□□□ -1.04
SHB17YKR043C MID1P41821 548 aa8.58□□□□□ -1.04
SHB17YKR043C YHC3P47040 408 aa8.58□□□□□ -1.04
SHB17YKR043C GPI14P47088 403 aaKnown RBP8.58□□□□□ -1.04
SHB17YKR043C ABM1P47146 123 aa8.58□□□□□ -1.04
SHB17YKR043C UFD1P53044 361 aa8.58□□□□□ -1.04
SHB17YKR043C YNR064CP53750 290 aa8.58□□□□□ -1.04
SHB17YKR043C YMR130WQ04223 302 aa8.58□□□□□ -1.04
SHB17YKR043C YOR186WQ08560 144 aa8.58□□□□□ -1.04
SHB17YKR043C PEX27Q08580 376 aa8.58□□□□□ -1.04
SHB17YKR043C PET122P10355 254 aa8.57□□□□□ -1.04
SHB17YKR043C IMP1P28627 190 aa8.57□□□□□ -1.04
SHB17YKR043C PEX4P29340 183 aa8.57□□□□□ -1.04
SHB17YKR043C HOM6P31116 359 aaKnown RBP8.57□□□□□ -1.04
SHB17YKR043C YKL063CP35725 167 aa8.57□□□□□ -1.04
SHB17YKR043C MSS4P38994 779 aa8.57□□□□□ -1.04
SHB17YKR043C SYG1P40528 902 aa8.57□□□□□ -1.04
SHB17YKR043C SYS1P41544 203 aa8.57□□□□□ -1.04
SHB17YKR043C BXI1P48558 297 aa8.57□□□□□ -1.04
SHB17YKR043C CAC2Q04199 468 aa8.57□□□□□ -1.04
SHB17YKR043C YOR029WQ12243 111 aa8.57□□□□□ -1.04
SHB17YKR043C PRE4P30657 266 aa8.56□□□□□ -1.04
SHB17YKR043C YBL010CP32788 280 aa8.56□□□□□ -1.04
SHB17YKR043C OSH7P38755 437 aa8.56□□□□□ -1.04
SHB17YKR043C MRX5P47007 382 aa8.56□□□□□ -1.04
SHB17YKR043C MRH4P53166 561 aa8.56□□□□□ -1.04
SHB17YKR043C FMP48P53233 369 aa8.56□□□□□ -1.04
SHB17YKR043C VHT1P53241 593 aa8.56□□□□□ -1.04
SHB17YKR043C SCM3Q12334 223 aa8.56□□□□□ -1.04
SHB17YKR043C DCP1Q12517 231 aaPredicted RBP8.56□□□□□ -1.04
SHB17YKR043C YMR105W-AQ8TGS8 64 aa8.56□□□□□ -1.04
SHB17YKR043C VMA11P32842 164 aa8.55□□□□□ -1.04
SHB17YKR043C VAM7P32912 316 aa8.55□□□□□ -1.04
SHB17YKR043C GPI18P38211 433 aa8.55□□□□□ -1.04
SHB17YKR043C HTD2P38790 280 aaKnown RBP8.55□□□□□ -1.04
SHB17YKR043C YIL060WP40519 144 aa8.55□□□□□ -1.04
SHB17YKR043C ERV29P53337 310 aa8.55□□□□□ -1.04
SHB17YKR043C UTP15Q04305 513 aaKnown RBP8.55□□□□□ -1.04
SHB17YKR043C YLR125WQ12138 136 aa8.55□□□□□ -1.04
SHB17YKR043C INP53Q12271 1107 aa8.55□□□□□ -1.04
SHB17YKR043C ODC2Q99297 307 aa8.55□□□□□ -1.04
SHB17YKR043C RPN13O13563 156 aa8.54□□□□□ -1.04
SHB17YKR043C VMA3P25515 160 aa8.54□□□□□ -1.04
SHB17YKR043C MBA1P38300 278 aa8.54□□□□□ -1.04
SHB17YKR043C GZF3P42944 551 aaKnown RBP8.54□□□□□ -1.04
SHB17YKR043C HNT1Q04344 158 aaKnown RBP8.54□□□□□ -1.04
SHB17YKR043C UPS1Q05776 175 aa8.54□□□□□ -1.04
SHB17YKR043C RPS31P05759 152 aaKnown RBP8.53□□□□□ -1.04
SHB17YKR043C CHO1P08456 276 aa8.53□□□□□ -1.04
SHB17YKR043C RFA3P26755 122 aaKnown RBP8.53□□□□□ -1.04
SHB17YKR043C RPB9P27999 122 aa8.53□□□□□ -1.04
SHB17YKR043C VMA5P31412 392 aaKnown RBP8.53□□□□□ -1.04
SHB17YKR043C IES6P32617 166 aa8.53□□□□□ -1.04
SHB17YKR043C PRS2P38620 318 aaKnown RBP8.53□□□□□ -1.04
SHB17YKR043C GNA1P43577 159 aaPredicted RBP8.53□□□□□ -1.04
SHB17YKR043C GWT1P47026 490 aa8.53□□□□□ -1.04
SHB17YKR043C XPT1P47165 209 aa8.53□□□□□ -1.04
SHB17YKR043C SKP1P52286 194 aa8.53□□□□□ -1.04
SHB17YKR043C PRM15Q03262 622 aa8.53□□□□□ -1.04
SHB17YKR043C IRC25Q07951 179 aa8.53□□□□□ -1.04
SHB17YKR043C NGL1Q08213 363 aaKnown RBP8.53□□□□□ -1.04
SHB17YKR043C YDL009CQ12210 107 aa8.53□□□□□ -1.04
SHB17YKR043C RPL15AP05748 204 aaKnown RBP8.52□□□□□ -1.05
SHB17YKR043C YCR101CP25607 182 aa8.52□□□□□ -1.05
SHB17YKR043C YHK8P38776 514 aa8.52□□□□□ -1.05
SHB17YKR043C CCS1P40202 249 aaKnown RBP8.52□□□□□ -1.05
SHB17YKR043C PIR5P46999 287 aa8.52□□□□□ -1.05
SHB17YKR043C IMD3P50095 523 aaKnown RBP8.52□□□□□ -1.05
SHB17YKR043C SUT1P53032 299 aaKnown RBP8.52□□□□□ -1.05
SHB17YKR043C YGR042WP53227 271 aa8.52□□□□□ -1.05
SHB17YKR043C RPL15BP54780 204 aaPredicted RBP8.52□□□□□ -1.05
SHB17YKR043C LIP2Q06005 328 aa8.52□□□□□ -1.05
SHB17YKR043C YOR283WQ12040 230 aaKnown RBP8.52□□□□□ -1.05
SHB17YKR043C YER145C-AA0A023PYF4 145 aa8.51□□□□□ -1.05
SHB17YKR043C AGA2P32781 87 aa8.51□□□□□ -1.05
SHB17YKR043C CWC23P52868 283 aaPredicted RBP8.51□□□□□ -1.05
SHB17YKR043C PLP1Q04004 230 aa8.51□□□□□ -1.05
SHB17YKR043C KEI1Q06346 221 aa8.51□□□□□ -1.05
SHB17YKR043C ATG40Q99325 256 aa8.51□□□□□ -1.05
SHB17YKR043C UTP20P35194 2493 aaKnown RBP8.51□□□□□ -1.05
SHB17YKR043C YLL053CP0CD98 152 aa8.5□□□□□ -1.05
SHB17YKR043C URA6P15700 204 aa8.5□□□□□ -1.05
SHB17YKR043C RFA1P22336 621 aaKnown RBP8.5□□□□□ -1.05
SHB17YKR043C ERG3P32353 365 aa8.5□□□□□ -1.05
SHB17YKR043C FIG1P38224 298 aa8.5□□□□□ -1.05
SHB17YKR043C SER2P42941 309 aa8.5□□□□□ -1.05
SHB17YKR043C OTU1P43558 301 aa8.5□□□□□ -1.05
SHB17YKR043C APJ1P53940 528 aa8.5□□□□□ -1.05
SHB17YKR043C MOT3P54785 490 aaKnown RBP8.5□□□□□ -1.05
SHB17YKR043C ARG5,6Q01217 863 aa8.5□□□□□ -1.05
SHB17YKR043C PEX10Q05568 337 aa8.5□□□□□ -1.05
SHB17YKR043C RGC1Q06108 1083 aaKnown RBP8.5□□□□□ -1.05
SHB17YKR043C PRP11Q07350 266 aaPredicted RBP8.5□□□□□ -1.05
SHB17YKR043C WHI5Q12416 295 aa8.5□□□□□ -1.05
SHB17YKR043C CCW14O13547 238 aa8.49□□□□□ -1.05
SHB17YKR043C VMA22P38784 181 aa8.49□□□□□ -1.05
SHB17YKR043C AIM46P38885 310 aa8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms