RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP82YJL061W YPL257WQ08974 193 aa1.35□□□□□ -2.19
NUP82YJL061W FKS1P38631 1876 aaKnown RBP1.35□□□□□ -2.19
NUP82YJL061W IPP1P00817 287 aaKnown RBP1.34□□□□□ -2.19
NUP82YJL061W YHR032W-AP0C5N6 59 aa1.34□□□□□ -2.19
NUP82YJL061W YMR144WP40214 342 aaKnown RBP1.34□□□□□ -2.19
NUP82YJL061W YNL046WP53956 172 aa1.34□□□□□ -2.19
NUP82YJL061W DCR2Q05924 578 aa1.34□□□□□ -2.19
NUP82YJL061W SEI1Q06058 285 aa1.34□□□□□ -2.19
NUP82YJL061W AKR2Q12013 749 aa1.34□□□□□ -2.19
NUP82YJL061W TCP1P12612 559 aaKnown RBP1.34□□□□□ -2.2
NUP82YJL061W DOA4P32571 926 aa1.34□□□□□ -2.2
NUP82YJL061W YKL075CP36083 450 aa1.34□□□□□ -2.2
NUP82YJL061W FIS1P40515 155 aa1.34□□□□□ -2.2
NUP82YJL061W YJL027CP47063 138 aaPredicted RBP1.34□□□□□ -2.2
NUP82YJL061W HAM1P47119 197 aaKnown RBP1.34□□□□□ -2.2
NUP82YJL061W ILM1P47155 203 aa1.34□□□□□ -2.2
NUP82YJL061W DAD3P69850 94 aa1.34□□□□□ -2.2
NUP82YJL061W PET117Q02771 107 aa1.34□□□□□ -2.2
NUP82YJL061W HTL1Q9URQ5 78 aa1.34□□□□□ -2.2
NUP82YJL061W COX5AP00424 153 aa1.33□□□□□ -2.2
NUP82YJL061W MRPL25P23369 157 aa1.33□□□□□ -2.2
NUP82YJL061W YHR086W-AQ3E746 53 aa1.33□□□□□ -2.2
NUP82YJL061W DSF1P0CX08 502 aa1.33□□□□□ -2.2
NUP82YJL061W YNR073CP0CX09 502 aa1.33□□□□□ -2.2
NUP82YJL061W SRB4P32569 687 aa1.33□□□□□ -2.2
NUP82YJL061W CUE1P38428 203 aa1.33□□□□□ -2.2
NUP82YJL061W SMD3P43321 101 aaKnown RBP1.33□□□□□ -2.2
NUP82YJL061W YLR126CQ12288 251 aa1.33□□□□□ -2.2
NUP82YJL061W RPL9AP05738 191 aaKnown RBP1.32□□□□□ -2.2
NUP82YJL061W ERD2P18414 219 aa1.32□□□□□ -2.2
NUP82YJL061W YCR016WP25617 290 aaKnown RBP1.32□□□□□ -2.2
NUP82YJL061W VMA11P32842 164 aa1.32□□□□□ -2.2
NUP82YJL061W YPT52P36018 234 aaKnown RBP1.32□□□□□ -2.2
NUP82YJL061W DOG1P38774 246 aa1.32□□□□□ -2.2
NUP82YJL061W FCY21P40039 528 aa1.32□□□□□ -2.2
NUP82YJL061W YJR056CP47115 236 aa1.32□□□□□ -2.2
NUP82YJL061W RPL9BP51401 191 aaKnown RBP1.32□□□□□ -2.2
NUP82YJL061W NUP84P52891 726 aa1.32□□□□□ -2.2
NUP82YJL061W YLR283WQ05867 314 aa1.32□□□□□ -2.2
NUP82YJL061W YOR020W-AQ3E824 90 aa1.32□□□□□ -2.2
NUP82YJL061W SNA3P14359 133 aa1.31□□□□□ -2.2
NUP82YJL061W LDB7P38210 180 aa1.31□□□□□ -2.2
NUP82YJL061W YAR068WP39564 161 aa1.31□□□□□ -2.2
NUP82YJL061W LIA1P47120 325 aaKnown RBP1.31□□□□□ -2.2
NUP82YJL061W MSN4P33749 630 aa1.31□□□□□ -2.2
NUP82YJL061W CAT5P41735 233 aa1.31□□□□□ -2.2
NUP82YJL061W BAT2P47176 376 aaKnown RBP1.31□□□□□ -2.2
NUP82YJL061W SSQ1Q05931 657 aaPredicted RBP1.31□□□□□ -2.2
NUP82YJL061W ATG39Q06159 398 aa1.31□□□□□ -2.2
NUP82YJL061W ATO3Q12359 275 aa1.31□□□□□ -2.2
NUP82YJL061W BOL1Q3E793 110 aa1.31□□□□□ -2.2
NUP82YJL061W SIR4P11978 1358 aa1.31□□□□□ -2.2
NUP82YJL061W FBA1P14540 359 aaKnown RBP1.3□□□□□ -2.2
NUP82YJL061W RPO26P20435 155 aa1.3□□□□□ -2.2
NUP82YJL061W PEX4P29340 183 aa1.3□□□□□ -2.2
NUP82YJL061W MDH3P32419 343 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
NUP82YJL061W RPF1P38805 295 aaKnown RBP1.3□□□□□ -2.2
NUP82YJL061W CTR2P38865 189 aa1.3□□□□□ -2.2
NUP82YJL061W MCM22P47167 239 aa1.3□□□□□ -2.2
NUP82YJL061W YGR219WP53307 113 aa1.3□□□□□ -2.2
NUP82YJL061W CFT1Q06632 1357 aaKnown RBP1.3□□□□□ -2.2
NUP82YJL061W MSW1P04803 379 aa1.3□□□□□ -2.2
NUP82YJL061W RPS5P26783 225 aaKnown RBP1.3□□□□□ -2.2
NUP82YJL061W RIB1P38066 345 aa1.3□□□□□ -2.2
NUP82YJL061W RSM25P40496 264 aa1.3□□□□□ -2.2
NUP82YJL061W CIS3P47001 227 aa1.3□□□□□ -2.2
NUP82YJL061W YML108WQ03759 105 aa1.3□□□□□ -2.2
NUP82YJL061W YML096WQ04489 525 aa1.3□□□□□ -2.2
NUP82YJL061W MSA1Q08471 629 aa1.3□□□□□ -2.2
NUP82YJL061W NIP7Q08962 181 aaKnown RBP1.3□□□□□ -2.2
NUP82YJL061W FCY2P17064 533 aa1.29□□□□□ -2.2
NUP82YJL061W SCL1P21243 252 aaKnown RBP1.29□□□□□ -2.2
NUP82YJL061W RPA43P46669 326 aa1.29□□□□□ -2.2
NUP82YJL061W ABF2Q02486 183 aa1.29□□□□□ -2.2
NUP82YJL061W MRPS8Q03799 155 aa1.29□□□□□ -2.2
NUP82YJL061W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
NUP82YJL061W BCY1P07278 416 aaKnown RBP1.28□□□□□ -2.2
NUP82YJL061W GRX2P17695 143 aaKnown RBP1.28□□□□□ -2.2
NUP82YJL061W VPS21P36017 210 aaKnown RBP1.28□□□□□ -2.2
NUP82YJL061W COX15P40086 486 aa1.28□□□□□ -2.2
NUP82YJL061W AYR1P40471 297 aa1.28□□□□□ -2.2
NUP82YJL061W YIL001WP40560 513 aa1.28□□□□□ -2.2
NUP82YJL061W RPC17P47076 161 aa1.28□□□□□ -2.2
NUP82YJL061W YJR149WP47177 404 aa1.28□□□□□ -2.2
NUP82YJL061W ERG25P53045 309 aa1.28□□□□□ -2.2
NUP82YJL061W NSA1P53136 463 aaPredicted RBP1.28□□□□□ -2.2
NUP82YJL061W NEJ1Q06148 342 aa1.28□□□□□ -2.2
NUP82YJL061W YPL229WQ99395 206 aa1.28□□□□□ -2.2
NUP82YJL061W MATALPHA1P0CY06 175 aa1.28□□□□□ -2.2
NUP82YJL061W HMLALPHA1P0CY07 175 aa1.28□□□□□ -2.2
NUP82YJL061W CDC10P25342 322 aaKnown RBP1.28□□□□□ -2.2
NUP82YJL061W YBR063CP38083 404 aa1.28□□□□□ -2.2
NUP82YJL061W ECM33P38248 429 aaKnown RBP1.28□□□□□ -2.2
NUP82YJL061W PRE6P40303 254 aaKnown RBP1.28□□□□□ -2.2
NUP82YJL061W TRM9P49957 279 aa1.28□□□□□ -2.2
NUP82YJL061W YMD8Q03697 442 aa1.28□□□□□ -2.2
NUP82YJL061W USB1Q12208 290 aaKnown RBP1.28□□□□□ -2.2
NUP82YJL061W OAC1P32332 324 aa1.27□□□□□ -2.21
NUP82YJL061W PHO88P38264 188 aaPredicted RBP1.27□□□□□ -2.21
NUP82YJL061W YER085CP40058 173 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms