RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C RAF1Q06891 181 aa3.12□□□□□ -1.91
SDS3YIL084C ADH1P00330 348 aaKnown RBP3.11□□□□□ -1.91
SDS3YIL084C GCY1P14065 312 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
SDS3YIL084C YKL071WP36086 256 aa3.11□□□□□ -1.91
SDS3YIL084C SHE1P38200 338 aa3.11□□□□□ -1.91
SDS3YIL084C LIN1P38852 340 aaPredicted RBP3.11□□□□□ -1.91
SDS3YIL084C INA22P40576 216 aa3.11□□□□□ -1.91
SDS3YIL084C YGR018CP53211 109 aa3.11□□□□□ -1.91
SDS3YIL084C BIO4P53630 237 aa3.11□□□□□ -1.91
SDS3YIL084C MNT4P53745 580 aa3.11□□□□□ -1.91
SDS3YIL084C IGO1P53897 168 aa3.11□□□□□ -1.91
SDS3YIL084C MRX11Q03079 207 aa3.11□□□□□ -1.91
SDS3YIL084C YMR111CQ04461 462 aaPredicted RBP3.11□□□□□ -1.91
SDS3YIL084C MGR3Q04472 501 aa3.11□□□□□ -1.91
SDS3YIL084C RNH1Q04740 348 aa3.11□□□□□ -1.91
SDS3YIL084C GMC2Q06201 188 aa3.11□□□□□ -1.91
SDS3YIL084C STF1P01098 86 aa3.1□□□□□ -1.91
SDS3YIL084C RPB9P27999 122 aa3.1□□□□□ -1.91
SDS3YIL084C VMA5P31412 392 aaKnown RBP3.1□□□□□ -1.91
SDS3YIL084C PDC2P32896 925 aa3.1□□□□□ -1.91
SDS3YIL084C YBR220CP38318 560 aa3.1□□□□□ -1.91
SDS3YIL084C ECM34P38728 170 aa3.1□□□□□ -1.91
SDS3YIL084C GDS1P41913 522 aa3.1□□□□□ -1.91
SDS3YIL084C YCH1P42937 148 aa3.1□□□□□ -1.91
SDS3YIL084C NAS6P50086 228 aa3.1□□□□□ -1.91
SDS3YIL084C HCH1P53834 153 aa3.1□□□□□ -1.91
SDS3YIL084C NCE101Q02820 53 aa3.1□□□□□ -1.91
SDS3YIL084C YDR249CQ03787 373 aa3.1□□□□□ -1.91
SDS3YIL084C API2Q04413 109 aa3.1□□□□□ -1.91
SDS3YIL084C SML1Q04964 104 aa3.1□□□□□ -1.91
SDS3YIL084C BUR2Q05949 395 aa3.1□□□□□ -1.91
SDS3YIL084C GET4Q12125 312 aa3.1□□□□□ -1.91
SDS3YIL084C MDN1Q12019 4910 aaKnown RBP3.1□□□□□ -1.91
SDS3YIL084C ITR2P30606 609 aa3.09□□□□□ -1.91
SDS3YIL084C SEC17P32602 292 aa3.09□□□□□ -1.91
SDS3YIL084C RPT5P33297 434 aaKnown RBP3.09□□□□□ -1.91
SDS3YIL084C RPS1AP33442 255 aaKnown RBP3.09□□□□□ -1.91
SDS3YIL084C ECM14P38836 430 aa3.09□□□□□ -1.91
SDS3YIL084C POP2P39008 433 aa3.09□□□□□ -1.91
SDS3YIL084C RPS12P48589 143 aaKnown RBP3.09□□□□□ -1.91
SDS3YIL084C VTI1Q04338 217 aa3.09□□□□□ -1.91
SDS3YIL084C COX20Q04935 205 aa3.09□□□□□ -1.91
SDS3YIL084C YLR036CQ07986 203 aa3.09□□□□□ -1.91
SDS3YIL084C YDL180WQ12301 547 aa3.09□□□□□ -1.91
SDS3YIL084C CBP2P03874 630 aaPredicted RBP3.08□□□□□ -1.92
SDS3YIL084C NMT1P14743 455 aa3.08□□□□□ -1.92
SDS3YIL084C BGL2P15703 313 aaKnown RBP3.08□□□□□ -1.92
SDS3YIL084C IME2P32581 645 aa3.08□□□□□ -1.92
SDS3YIL084C YCR087C-AP37263 153 aa3.08□□□□□ -1.92
SDS3YIL084C NSG1P38837 291 aa3.08□□□□□ -1.92
SDS3YIL084C CHL4P38907 458 aa3.08□□□□□ -1.92
SDS3YIL084C YER188WP40103 239 aa3.08□□□□□ -1.92
SDS3YIL084C ADO1P47143 340 aaKnown RBP3.08□□□□□ -1.92
SDS3YIL084C TAF6P53040 516 aa3.08□□□□□ -1.92
SDS3YIL084C GTR2P53290 341 aa3.08□□□□□ -1.92
SDS3YIL084C SWP1Q02795 286 aa3.08□□□□□ -1.92
SDS3YIL084C RVB1Q03940 463 aaKnown RBP3.08□□□□□ -1.92
SDS3YIL084C RDL2Q08742 149 aaKnown RBP3.08□□□□□ -1.92
SDS3YIL084C YLR053CQ12026 108 aa3.08□□□□□ -1.92
SDS3YIL084C RPN6Q12377 434 aa3.08□□□□□ -1.92
SDS3YIL084C TPI1P00942 248 aaKnown RBP3.07□□□□□ -1.92
SDS3YIL084C BUB2P26448 306 aaPredicted RBP3.07□□□□□ -1.92
SDS3YIL084C ACB1P31787 87 aa3.07□□□□□ -1.92
SDS3YIL084C CAT2P32796 670 aaKnown RBP3.07□□□□□ -1.92
SDS3YIL084C RPC37P36121 282 aa3.07□□□□□ -1.92
SDS3YIL084C MRPL39P36533 70 aa3.07□□□□□ -1.92
SDS3YIL084C YER184CP39961 794 aa3.07□□□□□ -1.92
SDS3YIL084C AYR1P40471 297 aa3.07□□□□□ -1.92
SDS3YIL084C YIR020CP40575 100 aa3.07□□□□□ -1.92
SDS3YIL084C PXR1P53335 271 aaPredicted RBP3.07□□□□□ -1.92
SDS3YIL084C STE23Q06010 1027 aa3.07□□□□□ -1.92
SDS3YIL084C PIN3Q06449 215 aa3.07□□□□□ -1.92
SDS3YIL084C RTC5Q12108 567 aaKnown RBP3.07□□□□□ -1.92
SDS3YIL084C RTR2Q12378 196 aa3.07□□□□□ -1.92
SDS3YIL084C RPL35AP0CX84 120 aaKnown RBP3.06□□□□□ -1.92
SDS3YIL084C RPL35BP0CX85 120 aaKnown RBP3.06□□□□□ -1.92
SDS3YIL084C DAL80P26343 269 aa3.06□□□□□ -1.92
SDS3YIL084C YKL102CP34249 101 aa3.06□□□□□ -1.92
SDS3YIL084C SMP1P38128 452 aa3.06□□□□□ -1.92
SDS3YIL084C YHL044WP38727 235 aa3.06□□□□□ -1.92
SDS3YIL084C YHR180WP38868 163 aa3.06□□□□□ -1.92
SDS3YIL084C YER121WP40076 114 aa3.06□□□□□ -1.92
SDS3YIL084C PRE6P40303 254 aaKnown RBP3.06□□□□□ -1.92
SDS3YIL084C HIT1P46973 164 aa3.06□□□□□ -1.92
SDS3YIL084C GTO1P48239 356 aa3.06□□□□□ -1.92
SDS3YIL084C YGR168CP53293 376 aa3.06□□□□□ -1.92
SDS3YIL084C COS6P53344 381 aa3.06□□□□□ -1.92
SDS3YIL084C RPL22BP56628 122 aaKnown RBP3.06□□□□□ -1.92
SDS3YIL084C SED1Q01589 338 aa3.06□□□□□ -1.92
SDS3YIL084C YPL039WQ03080 316 aa3.06□□□□□ -1.92
SDS3YIL084C RIM9Q04734 239 aa3.06□□□□□ -1.92
SDS3YIL084C CSI2Q08054 341 aa3.06□□□□□ -1.92
SDS3YIL084C YAL064W-BO13512 126 aa3.05□□□□□ -1.92
SDS3YIL084C RAS2P01120 322 aaKnown RBP3.05□□□□□ -1.92
SDS3YIL084C MRPL25P23369 157 aa3.05□□□□□ -1.92
SDS3YIL084C KTI12P34253 313 aaKnown RBP3.05□□□□□ -1.92
SDS3YIL084C YHB1P39676 399 aaKnown RBP3.05□□□□□ -1.92
SDS3YIL084C SSO2P39926 295 aa3.05□□□□□ -1.92
SDS3YIL084C RRT13P40042 185 aa3.05□□□□□ -1.92
SDS3YIL084C RFC4P40339 323 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms