RNA–Protein interactions for RNA: YHR153C

SPO16, Transcript of Meiosis-specific protein involved in synaptonemal complex assembly, yeastyeast

Gene SPO16, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO16YHR153C YPL039WQ03080 316 aa3.18□□□□□ -1.9
SPO16YHR153C UTP20P35194 2493 aaKnown RBP3.18□□□□□ -1.9
SPO16YHR153C TUS1Q06412 1307 aa3.18□□□□□ -1.9
SPO16YHR153C COY1P34237 679 aa3.17□□□□□ -1.9
SPO16YHR153C YKR032WP36127 104 aa3.17□□□□□ -1.9
SPO16YHR153C SYF2P53277 215 aaPredicted RBP3.17□□□□□ -1.9
SPO16YHR153C RAD3P06839 778 aa3.16□□□□□ -1.9
SPO16YHR153C COS2P0CX12 379 aa3.16□□□□□ -1.9
SPO16YHR153C COS3P0CX13 379 aa3.16□□□□□ -1.9
SPO16YHR153C KRE1P17260 313 aa3.16□□□□□ -1.9
SPO16YHR153C PRS4P38063 326 aaPredicted RBP3.16□□□□□ -1.9
SPO16YHR153C MRX3P38172 270 aa3.16□□□□□ -1.9
SPO16YHR153C YHL049CP38722 271 aa3.16□□□□□ -1.9
SPO16YHR153C YJR141WP47172 347 aaPredicted RBP3.16□□□□□ -1.9
SPO16YHR153C NIF3P53081 288 aa3.16□□□□□ -1.9
SPO16YHR153C YDR209CQ03480 137 aa3.16□□□□□ -1.9
SPO16YHR153C CTS2Q06350 511 aa3.16□□□□□ -1.9
SPO16YHR153C ATG17Q06410 417 aa3.16□□□□□ -1.9
SPO16YHR153C RRT8Q08219 342 aa3.16□□□□□ -1.9
SPO16YHR153C YBL112CQ3E7Y4 105 aa3.16□□□□□ -1.9
SPO16YHR153C POX1P13711 748 aa3.15□□□□□ -1.91
SPO16YHR153C EBS1Q03466 884 aaKnown RBP3.15□□□□□ -1.91
SPO16YHR153C FCF1Q05498 189 aaPredicted RBP3.15□□□□□ -1.91
SPO16YHR153C YLR173WQ06247 608 aa3.15□□□□□ -1.91
SPO16YHR153C SDO1Q07953 250 aaKnown RBP3.15□□□□□ -1.91
SPO16YHR153C YOL019WQ08157 551 aa3.15□□□□□ -1.91
SPO16YHR153C MED4Q12343 284 aa3.15□□□□□ -1.91
SPO16YHR153C YPL119C-AQ3E751 87 aa3.15□□□□□ -1.91
SPO16YHR153C MLP1Q02455 1875 aaKnown RBP3.15□□□□□ -1.91
SPO16YHR153C UBR2Q07963 1872 aa3.15□□□□□ -1.91
SPO16YHR153C RNA15P25299 296 aaPredicted RBP3.14□□□□□ -1.91
SPO16YHR153C YHR045WP38775 560 aa3.14□□□□□ -1.91
SPO16YHR153C YER084WP40057 128 aa3.14□□□□□ -1.91
SPO16YHR153C CSM4Q08955 156 aa3.14□□□□□ -1.91
SPO16YHR153C YOL107WQ12239 342 aa3.14□□□□□ -1.91
SPO16YHR153C RPL40AP0CH08 128 aaKnown RBP3.13□□□□□ -1.91
SPO16YHR153C RPL40BP0CH09 128 aaKnown RBP3.13□□□□□ -1.91
SPO16YHR153C TOM40P23644 387 aaKnown RBP3.13□□□□□ -1.91
SPO16YHR153C DPB2P24482 689 aaPredicted RBP3.13□□□□□ -1.91
SPO16YHR153C CWP1P28319 239 aa3.13□□□□□ -1.91
SPO16YHR153C QRI5P32344 111 aa3.13□□□□□ -1.91
SPO16YHR153C UTR5P32630 166 aa3.13□□□□□ -1.91
SPO16YHR153C YJL028WP47062 111 aa3.13□□□□□ -1.91
SPO16YHR153C RRN5Q02983 363 aa3.13□□□□□ -1.91
SPO16YHR153C CLP1Q08685 445 aaPredicted RBP3.13□□□□□ -1.91
SPO16YHR153C PST1Q12355 444 aa3.13□□□□□ -1.91
SPO16YHR153C AGC1Q12482 902 aa3.13□□□□□ -1.91
SPO16YHR153C PPH21P23594 369 aa3.12□□□□□ -1.91
SPO16YHR153C RNP1P32385 249 aa3.12□□□□□ -1.91
SPO16YHR153C FZO1P38297 855 aa3.12□□□□□ -1.91
SPO16YHR153C ASI3P53983 676 aa3.12□□□□□ -1.91
SPO16YHR153C YMR166CQ03829 368 aa3.12□□□□□ -1.91
SPO16YHR153C IRA2P19158 3079 aa3.11□□□□□ -1.91
SPO16YHR153C HOM6P31116 359 aaKnown RBP3.11□□□□□ -1.91
SPO16YHR153C ECM13P38195 257 aa3.11□□□□□ -1.91
SPO16YHR153C BIG1P38813 335 aa3.11□□□□□ -1.91
SPO16YHR153C SMB1P40018 196 aaKnown RBP3.11□□□□□ -1.91
SPO16YHR153C BNA6P43619 295 aa3.11□□□□□ -1.91
SPO16YHR153C NBP1P52919 319 aaPredicted RBP3.11□□□□□ -1.91
SPO16YHR153C MRPL50P53724 139 aa3.11□□□□□ -1.91
SPO16YHR153C YDR124WQ04608 324 aa3.11□□□□□ -1.91
SPO16YHR153C BOP2Q06150 570 aa3.11□□□□□ -1.91
SPO16YHR153C SLD7Q08457 257 aa3.11□□□□□ -1.91
SPO16YHR153C NOT5Q12514 560 aaPredicted RBP3.11□□□□□ -1.91
SPO16YHR153C YPL247CQ12523 523 aa3.11□□□□□ -1.91
SPO16YHR153C RPT5P33297 434 aaKnown RBP3.1□□□□□ -1.91
SPO16YHR153C GDH2P33327 1092 aaKnown RBP3.1□□□□□ -1.91
SPO16YHR153C MAL32P38158 584 aa3.1□□□□□ -1.91
SPO16YHR153C MAL12P53341 584 aa3.1□□□□□ -1.91
SPO16YHR153C SRL4Q03085 281 aa3.1□□□□□ -1.91
SPO16YHR153C YPR098CQ06089 161 aa3.1□□□□□ -1.91
SPO16YHR153C YPR147CQ06522 304 aaKnown RBP3.1□□□□□ -1.91
SPO16YHR153C PLB3Q08108 686 aa3.1□□□□□ -1.91
SPO16YHR153C SSH1P38353 490 aaKnown RBP3.09□□□□□ -1.91
SPO16YHR153C USE1P53146 245 aa3.09□□□□□ -1.91
SPO16YHR153C KRE28Q04431 385 aa3.09□□□□□ -1.91
SPO16YHR153C YDR524C-BQ3E6R4 66 aa3.09□□□□□ -1.91
SPO16YHR153C YBL008W-AQ3E821 79 aa3.09□□□□□ -1.91
SPO16YHR153C ECM29P38737 1868 aa3.08□□□□□ -1.92
SPO16YHR153C YKR104WP0CE69 306 aa3.08□□□□□ -1.92
SPO16YHR153C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
SPO16YHR153C JEN1P36035 616 aa3.08□□□□□ -1.92
SPO16YHR153C MRH4P53166 561 aa3.08□□□□□ -1.92
SPO16YHR153C EMI1Q04406 187 aa3.08□□□□□ -1.92
SPO16YHR153C MYO5Q04439 1219 aaKnown RBP3.08□□□□□ -1.92
SPO16YHR153C YMR114CQ04471 368 aaKnown RBP3.08□□□□□ -1.92
SPO16YHR153C SPO77Q06134 477 aa3.08□□□□□ -1.92
SPO16YHR153C PAM18Q07914 168 aa3.08□□□□□ -1.92
SPO16YHR153C SYC1Q08553 188 aaPredicted RBP3.08□□□□□ -1.92
SPO16YHR153C MSH5Q12175 901 aa3.08□□□□□ -1.92
SPO16YHR153C SNU23Q12368 194 aaPredicted RBP3.08□□□□□ -1.92
SPO16YHR153C BEM2P39960 2167 aaKnown RBP3.08□□□□□ -1.92
SPO16YHR153C RPL26AP05743 127 aaKnown RBP3.07□□□□□ -1.92
SPO16YHR153C RAD10P06838 210 aa3.07□□□□□ -1.92
SPO16YHR153C DPM1P14020 267 aaKnown RBP3.07□□□□□ -1.92
SPO16YHR153C YHB1P39676 399 aaKnown RBP3.07□□□□□ -1.92
SPO16YHR153C THO1P40040 218 aaKnown RBP3.07□□□□□ -1.92
SPO16YHR153C RTR1P40084 226 aaPredicted RBP3.07□□□□□ -1.92
SPO16YHR153C FMC1P40491 155 aa3.07□□□□□ -1.92
SPO16YHR153C GLG2P47011 380 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 104.4 ms