RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C YNR073CP0CX09 502 aa1.91□□□□□ -2.1
CUP1-2YHR055C RIB7P33312 244 aa1.91□□□□□ -2.1
CUP1-2YHR055C VTC1P40046 129 aaRIP-Chip data1.91□□□□□ -2.1not detected
CUP1-2YHR055C GLG2P47011 380 aa1.91□□□□□ -2.1
CUP1-2YHR055C GPI8P49018 411 aa1.91□□□□□ -2.1
CUP1-2YHR055C RPL9BP51401 191 aaKnown RBP1.91□□□□□ -2.1
CUP1-2YHR055C YPR172WQ06608 200 aa1.91□□□□□ -2.1
CUP1-2YHR055C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
CUP1-2YHR055C RAS2P01120 322 aaKnown RBP1.9□□□□□ -2.11
CUP1-2YHR055C YBR096WP38256 230 aa1.9□□□□□ -2.11
CUP1-2YHR055C CSM4Q08955 156 aa1.9□□□□□ -2.11
CUP1-2YHR055C YCT1Q12235 531 aa1.9□□□□□ -2.11
CUP1-2YHR055C YOL107WQ12239 342 aa1.9□□□□□ -2.11
CUP1-2YHR055C RSR1P13856 272 aa1.89□□□□□ -2.11
CUP1-2YHR055C PHO88P38264 188 aaPredicted RBP1.89□□□□□ -2.11
CUP1-2YHR055C YHR127WP38833 243 aaKnown RBP1.89□□□□□ -2.11
CUP1-2YHR055C CTR2P38865 189 aa1.89□□□□□ -2.11
CUP1-2YHR055C BFR1P38934 470 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
CUP1-2YHR055C KAP95Q06142 861 aaKnown RBP1.89□□□□□ -2.11
CUP1-2YHR055C HTL1Q9URQ5 78 aa1.89□□□□□ -2.11
CUP1-2YHR055C MSW1P04803 379 aa1.88□□□□□ -2.11
CUP1-2YHR055C BMT5P40493 336 aa1.88□□□□□ -2.11
CUP1-2YHR055C PRM10P42946 383 aa1.88□□□□□ -2.11
CUP1-2YHR055C CYT2Q00873 224 aa1.88□□□□□ -2.11
CUP1-2YHR055C ATG39Q06159 398 aa1.88□□□□□ -2.11
CUP1-2YHR055C CDC7P06243 507 aa1.87□□□□□ -2.11
CUP1-2YHR055C MDH2P22133 377 aa1.87□□□□□ -2.11
CUP1-2YHR055C YPT52P36018 234 aaKnown RBP1.87□□□□□ -2.11
CUP1-2YHR055C ERV15P38312 142 aa1.87□□□□□ -2.11
CUP1-2YHR055C YHR022CP38763 256 aa1.87□□□□□ -2.11
CUP1-2YHR055C YAR068WP39564 161 aa1.87□□□□□ -2.11
CUP1-2YHR055C YNL046WP53956 172 aa1.87□□□□□ -2.11
CUP1-2YHR055C SIR4P11978 1358 aa1.86□□□□□ -2.11
CUP1-2YHR055C SNA3P14359 133 aa1.86□□□□□ -2.11
CUP1-2YHR055C OAC1P32332 324 aa1.86□□□□□ -2.11
CUP1-2YHR055C DSE2P38844 325 aa1.86□□□□□ -2.11
CUP1-2YHR055C YIL001WP40560 513 aa1.86□□□□□ -2.11
CUP1-2YHR055C HAM1P47119 197 aaKnown RBP1.86□□□□□ -2.11
CUP1-2YHR055C ILM1P47155 203 aa1.86□□□□□ -2.11
CUP1-2YHR055C NEJ1Q06148 342 aa1.86□□□□□ -2.11
CUP1-2YHR055C MSH5Q12175 901 aa1.86□□□□□ -2.11
CUP1-2YHR055C YOR020W-AQ3E824 90 aa1.86□□□□□ -2.11
CUP1-2YHR055C YOL162WP0CF19 215 aa1.85□□□□□ -2.11
CUP1-2YHR055C YMR144WP40214 342 aaKnown RBP1.85□□□□□ -2.11
CUP1-2YHR055C YKE4P40544 346 aa1.85□□□□□ -2.11
CUP1-2YHR055C YJR056CP47115 236 aa1.85□□□□□ -2.11
CUP1-2YHR055C MRPL50P53724 139 aa1.85□□□□□ -2.11
CUP1-2YHR055C USB1Q12208 290 aaKnown RBP1.85□□□□□ -2.11
CUP1-2YHR055C YOR029WQ12243 111 aa1.85□□□□□ -2.11
CUP1-2YHR055C DCN1Q12395 269 aa1.85□□□□□ -2.11
CUP1-2YHR055C RRP36Q12481 300 aaPredicted RBP1.85□□□□□ -2.11
CUP1-2YHR055C BNA6P43619 295 aa1.84□□□□□ -2.11
CUP1-2YHR055C SEI1Q06058 285 aa1.84□□□□□ -2.11
CUP1-2YHR055C YUH1P35127 236 aa1.83□□□□□ -2.12
CUP1-2YHR055C YJR079WP47126 109 aa1.83□□□□□ -2.12
CUP1-2YHR055C JHD2P47156 728 aaPredicted RBP1.83□□□□□ -2.12
CUP1-2YHR055C SSQ1Q05931 657 aaPredicted RBP1.83□□□□□ -2.12
CUP1-2YHR055C HEM25Q07534 307 aa1.83□□□□□ -2.12
CUP1-2YHR055C FCY2P17064 533 aa1.82□□□□□ -2.12
CUP1-2YHR055C GRX2P17695 143 aaKnown RBP1.82□□□□□ -2.12
CUP1-2YHR055C ERD2P18414 219 aa1.82□□□□□ -2.12
CUP1-2YHR055C RPF1P38805 295 aaKnown RBP1.82□□□□□ -2.12
CUP1-2YHR055C YER135CP40082 130 aa1.82□□□□□ -2.12
CUP1-2YHR055C ARR2Q06597 130 aa1.82□□□□□ -2.12
CUP1-2YHR055C NIP7Q08962 181 aaKnown RBP1.82□□□□□ -2.12
CUP1-2YHR055C DDI2P0CH63 225 aa1.81□□□□□ -2.12
CUP1-2YHR055C DDI3P0CH64 225 aa1.81□□□□□ -2.12
CUP1-2YHR055C YKR045CP36138 183 aa1.81□□□□□ -2.12
CUP1-2YHR055C YHR180WP38868 163 aa1.81□□□□□ -2.12
CUP1-2YHR055C CAT5P41735 233 aa1.81□□□□□ -2.12
CUP1-2YHR055C PAM18Q07914 168 aa1.81□□□□□ -2.12
CUP1-2YHR055C RRT8Q08219 342 aa1.81□□□□□ -2.12
CUP1-2YHR055C YLR126CQ12288 251 aa1.81□□□□□ -2.12
CUP1-2YHR055C TCP1P12612 559 aaKnown RBP1.8□□□□□ -2.12
CUP1-2YHR055C YKL075CP36083 450 aa1.8□□□□□ -2.12
CUP1-2YHR055C RPA43P46669 326 aa1.8□□□□□ -2.12
CUP1-2YHR055C YNR062CP53748 327 aa1.8□□□□□ -2.12
CUP1-2YHR055C BUD25P85052 153 aa1.8□□□□□ -2.12
CUP1-2YHR055C KRE28Q04431 385 aa1.8□□□□□ -2.12
CUP1-2YHR055C YML096WQ04489 525 aa1.8□□□□□ -2.12
CUP1-2YHR055C YLR173WQ06247 608 aa1.8□□□□□ -2.12
CUP1-2YHR055C MSA1Q08471 629 aa1.8□□□□□ -2.12
CUP1-2YHR055C TPO4Q12256 659 aa1.8□□□□□ -2.12
CUP1-2YHR055C YBR063CP38083 404 aa1.79□□□□□ -2.12
CUP1-2YHR055C ECM33P38248 429 aaKnown RBP1.79□□□□□ -2.12
CUP1-2YHR055C AVT2P39981 480 aa1.79□□□□□ -2.12
CUP1-2YHR055C RSM25P40496 264 aa1.79□□□□□ -2.12
CUP1-2YHR055C AGE2P40529 298 aa1.79□□□□□ -2.12
CUP1-2YHR055C HOC1P47124 396 aa1.79□□□□□ -2.12
CUP1-2YHR055C MED4Q12343 284 aa1.79□□□□□ -2.12
CUP1-2YHR055C UBR2Q07963 1872 aa1.78□□□□□ -2.12
CUP1-2YHR055C RPS5P26783 225 aaKnown RBP1.78□□□□□ -2.12
CUP1-2YHR055C RIB1P38066 345 aa1.78□□□□□ -2.12
CUP1-2YHR055C YBR219CP38317 127 aa1.78□□□□□ -2.12
CUP1-2YHR055C YNL134CP53912 376 aaKnown RBP1.78□□□□□ -2.12
CUP1-2YHR055C ABF2Q02486 183 aa1.78□□□□□ -2.12
CUP1-2YHR055C CDC8P00572 216 aa1.77□□□□□ -2.13
CUP1-2YHR055C PET9P18239 318 aaKnown RBP1.77□□□□□ -2.13
CUP1-2YHR055C RPT5P33297 434 aaKnown RBP1.77□□□□□ -2.13
CUP1-2YHR055C SVP26P38869 228 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 128.5 ms