RNA–Protein interactions for RNA: YGR081C

SLX9, Transcript of Protein required for pre-rRNA processing, yeastyeast

Gene SLX9, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX9YGR081C NPT1P39683 429 aaKnown RBP1.54□□□□□ -2.16
SLX9YGR081C TIF34P40217 347 aaKnown RBP1.54□□□□□ -2.16
SLX9YGR081C YNL260CP53846 198 aa1.54□□□□□ -2.16
SLX9YGR081C YNL050CP53952 270 aa1.54□□□□□ -2.16
SLX9YGR081C EBS1Q03466 884 aaKnown RBP1.54□□□□□ -2.16
SLX9YGR081C VBA1Q04301 562 aa1.54□□□□□ -2.16
SLX9YGR081C SEC10Q06245 871 aa1.54□□□□□ -2.16
SLX9YGR081C YOS9Q99220 542 aa1.54□□□□□ -2.16
SLX9YGR081C AI5_BETAQ9ZZX0 354 aa1.54□□□□□ -2.16
SLX9YGR081C UGA1P17649 471 aa1.53□□□□□ -2.16
SLX9YGR081C YCR102CP25608 368 aa1.53□□□□□ -2.16
SLX9YGR081C SPT8P38915 602 aa1.53□□□□□ -2.16
SLX9YGR081C AGX1P43567 385 aa1.53□□□□□ -2.16
SLX9YGR081C YJL028WP47062 111 aa1.53□□□□□ -2.16
SLX9YGR081C NIF3P53081 288 aa1.53□□□□□ -2.16
SLX9YGR081C MDM34P53083 459 aa1.53□□□□□ -2.16
SLX9YGR081C PNC1P53184 216 aaKnown RBP1.53□□□□□ -2.16
SLX9YGR081C CDC14Q00684 551 aa1.53□□□□□ -2.16
SLX9YGR081C SFH1Q06168 426 aa1.53□□□□□ -2.16
SLX9YGR081C YOL024WQ08172 172 aa1.53□□□□□ -2.16
SLX9YGR081C SSK22P25390 1331 aaPredicted RBP1.52□□□□□ -2.17
SLX9YGR081C RPP0P05317 312 aaKnown RBP1.52□□□□□ -2.17
SLX9YGR081C POX1P13711 748 aa1.52□□□□□ -2.17
SLX9YGR081C TEM1P38987 245 aa1.52□□□□□ -2.17
SLX9YGR081C YGL185CP53100 379 aa1.52□□□□□ -2.17
SLX9YGR081C CPD1P53314 239 aa1.52□□□□□ -2.17
SLX9YGR081C ATC1Q04005 294 aa1.52□□□□□ -2.17
SLX9YGR081C ERV41Q04651 352 aa1.52□□□□□ -2.17
SLX9YGR081C BCP1Q06338 283 aa1.52□□□□□ -2.17
SLX9YGR081C GEP5Q12393 293 aa1.52□□□□□ -2.17
SLX9YGR081C YIL046W-AQ3E7Z4 54 aa1.52□□□□□ -2.17
SLX9YGR081C HKR1P41809 1802 aa1.52□□□□□ -2.17
SLX9YGR081C UTP10P42945 1769 aaKnown RBP1.52□□□□□ -2.17
SLX9YGR081C RPC40P07703 335 aaKnown RBP1.51□□□□□ -2.17
SLX9YGR081C ECM13P38195 257 aa1.51□□□□□ -2.17
SLX9YGR081C YJL118WP47022 219 aa1.51□□□□□ -2.17
SLX9YGR081C TAD2P47058 250 aa1.51□□□□□ -2.17
SLX9YGR081C SWS2P53937 143 aa1.51□□□□□ -2.17
SLX9YGR081C PEX12Q04370 399 aa1.51□□□□□ -2.17
SLX9YGR081C EMI1Q04406 187 aa1.51□□□□□ -2.17
SLX9YGR081C FKS1P38631 1876 aaKnown RBP1.51□□□□□ -2.17
SLX9YGR081C STF1P01098 86 aa1.5□□□□□ -2.17
SLX9YGR081C POF1P25576 258 aa1.5□□□□□ -2.17
SLX9YGR081C RNP1P32385 249 aa1.5□□□□□ -2.17
SLX9YGR081C NBP35P52920 328 aa1.5□□□□□ -2.17
SLX9YGR081C LSB1P53281 241 aa1.5□□□□□ -2.17
SLX9YGR081C ECM29P38737 1868 aa1.5□□□□□ -2.17
SLX9YGR081C RAD3P06839 778 aa1.49□□□□□ -2.17
SLX9YGR081C MEK1P24719 497 aaPredicted RBP1.49□□□□□ -2.17
SLX9YGR081C YHL049CP38722 271 aa1.49□□□□□ -2.17
SLX9YGR081C LSM4P40070 187 aaKnown RBP1.49□□□□□ -2.17
SLX9YGR081C FMP33P46998 180 aa1.49□□□□□ -2.17
SLX9YGR081C BOP2Q06150 570 aa1.49□□□□□ -2.17
SLX9YGR081C ARV1Q06541 321 aa1.49□□□□□ -2.17
SLX9YGR081C BRR2P32639 2163 aaKnown RBP1.48□□□□□ -2.17
SLX9YGR081C SWI1P09547 1314 aa1.48□□□□□ -2.17
SLX9YGR081C SGA1P08019 549 aa1.48□□□□□ -2.17
SLX9YGR081C DAL82P21705 255 aa1.48□□□□□ -2.17
SLX9YGR081C SCM4P32564 187 aa1.48□□□□□ -2.17
SLX9YGR081C MAL32P38158 584 aa1.48□□□□□ -2.17
SLX9YGR081C HEK2P38199 381 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
SLX9YGR081C PRM9P39551 298 aa1.48□□□□□ -2.17
SLX9YGR081C YFR054CP43622 192 aa1.48□□□□□ -2.17
SLX9YGR081C SLX9P53251 210 aaPredicted RBP1.48□□□□□ -2.17
SLX9YGR081C MAL12P53341 584 aa1.48□□□□□ -2.17
SLX9YGR081C YSR3P23501 404 aa1.47□□□□□ -2.17
SLX9YGR081C MRPL40P36534 297 aa1.47□□□□□ -2.17
SLX9YGR081C TVP23P38962 199 aa1.47□□□□□ -2.17
SLX9YGR081C AAH1P53909 347 aa1.47□□□□□ -2.17
SLX9YGR081C PST1Q12355 444 aa1.47□□□□□ -2.17
SLX9YGR081C DBP3P20447 523 aaKnown RBP1.46□□□□□ -2.18
SLX9YGR081C DOA4P32571 926 aa1.46□□□□□ -2.18
SLX9YGR081C SRX1P36077 127 aa1.46□□□□□ -2.18
SLX9YGR081C SNX4P47057 423 aa1.46□□□□□ -2.18
SLX9YGR081C TIM21P53220 239 aa1.46□□□□□ -2.18
SLX9YGR081C MNT4P53745 580 aa1.46□□□□□ -2.18
SLX9YGR081C PER33Q12144 273 aa1.46□□□□□ -2.18
SLX9YGR081C FMP16Q12497 93 aa1.46□□□□□ -2.18
SLX9YGR081C SAS5Q99314 248 aa1.46□□□□□ -2.18
SLX9YGR081C LAA1P39526 2014 aa1.45□□□□□ -2.18
SLX9YGR081C ARP5P53946 755 aa1.45□□□□□ -2.18
SLX9YGR081C PUT1P09368 476 aa1.44□□□□□ -2.18
SLX9YGR081C CWP1P28319 239 aa1.44□□□□□ -2.18
SLX9YGR081C HSM3P38348 480 aa1.44□□□□□ -2.18
SLX9YGR081C RCY1P39531 840 aa1.44□□□□□ -2.18
SLX9YGR081C SMD3P43321 101 aaKnown RBP1.44□□□□□ -2.18
SLX9YGR081C SPP2Q02521 185 aa1.44□□□□□ -2.18
SLX9YGR081C SME1Q12330 94 aaPredicted RBP1.44□□□□□ -2.18
SLX9YGR081C MRPL23Q12487 163 aaPredicted RBP1.44□□□□□ -2.18
SLX9YGR081C IKI3Q06706 1349 aaKnown RBP1.43□□□□□ -2.18
SLX9YGR081C URA2P07259 2214 aaKnown RBP1.43□□□□□ -2.18
SLX9YGR081C CCA1P21269 546 aa1.43□□□□□ -2.18
SLX9YGR081C PEX34P25584 144 aa1.43□□□□□ -2.18
SLX9YGR081C YKL070WP36087 169 aa1.43□□□□□ -2.18
SLX9YGR081C AYR1P40471 297 aa1.43□□□□□ -2.18
SLX9YGR081C MRX5P47007 382 aa1.43□□□□□ -2.18
SLX9YGR081C DAD3P69850 94 aa1.43□□□□□ -2.18
SLX9YGR081C PEX10Q05568 337 aa1.43□□□□□ -2.18
SLX9YGR081C CTR3Q06686 241 aa1.43□□□□□ -2.18
SLX9YGR081C SLD7Q08457 257 aa1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 68.5 ms