RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W SEI1Q06058 285 aa2.04□□□□□ -2.08
RPN9YDR427W YPR172WQ06608 200 aa2.04□□□□□ -2.08
RPN9YDR427W YLR030WQ07967 263 aa2.04□□□□□ -2.08
RPN9YDR427W ERD2P18414 219 aa2.03□□□□□ -2.08
RPN9YDR427W YCR016WP25617 290 aaKnown RBP2.03□□□□□ -2.08
RPN9YDR427W RPS5P26783 225 aaKnown RBP2.03□□□□□ -2.08
RPN9YDR427W NUP84P52891 726 aa2.03□□□□□ -2.08
RPN9YDR427W YHR086W-AQ3E746 53 aa2.03□□□□□ -2.08
RPN9YDR427W YPL229WQ99395 206 aa2.03□□□□□ -2.08
RPN9YDR427W Q0255P03881 472 aa2.02□□□□□ -2.09
RPN9YDR427W ERG24P32462 438 aaKnown RBP2.02□□□□□ -2.09
RPN9YDR427W DOA4P32571 926 aa2.02□□□□□ -2.09
RPN9YDR427W ARC15P40518 154 aaRIP-Chip data2.02□□□□□ -2.09not detected
RPN9YDR427W BAT2P47176 376 aaKnown RBP2.02□□□□□ -2.09
RPN9YDR427W GTR2P53290 341 aa2.02□□□□□ -2.09
RPN9YDR427W INM2Q05533 292 aa2.02□□□□□ -2.09
RPN9YDR427W YLR126CQ12288 251 aa2.02□□□□□ -2.09
RPN9YDR427W CFT1Q06632 1357 aaKnown RBP2.01□□□□□ -2.09
RPN9YDR427W COX5AP00424 153 aa2.01□□□□□ -2.09
RPN9YDR427W YHR032W-AP0C5N6 59 aa2.01□□□□□ -2.09
RPN9YDR427W MATALPHA1P0CY06 175 aa2.01□□□□□ -2.09
RPN9YDR427W HMLALPHA1P0CY07 175 aa2.01□□□□□ -2.09
RPN9YDR427W MRPL25P23369 157 aa2.01□□□□□ -2.09
RPN9YDR427W YHR125WP38831 101 aa2.01□□□□□ -2.09
RPN9YDR427W LIA1P47120 325 aaKnown RBP2.01□□□□□ -2.09
RPN9YDR427W DAD3P69850 94 aa2.01□□□□□ -2.09
RPN9YDR427W MSA1Q08471 629 aa2.01□□□□□ -2.09
RPN9YDR427W ADH3P07246 375 aaKnown RBP2□□□□□ -2.09
RPN9YDR427W PUT1P09368 476 aa2□□□□□ -2.09
RPN9YDR427W SNA3P14359 133 aa2□□□□□ -2.09
RPN9YDR427W SRB4P32569 687 aa2□□□□□ -2.09
RPN9YDR427W MSN4P33749 630 aa2□□□□□ -2.09
RPN9YDR427W DOG1P38774 246 aa2□□□□□ -2.09
RPN9YDR427W CTR2P38865 189 aa2□□□□□ -2.09
RPN9YDR427W RMR1P53060 241 aa2□□□□□ -2.09
RPN9YDR427W YMR279CQ03263 540 aa2□□□□□ -2.09
RPN9YDR427W YPL257WQ08974 193 aa2□□□□□ -2.09
RPN9YDR427W SWR1Q05471 1514 aa2□□□□□ -2.09
RPN9YDR427W IPP1P00817 287 aaKnown RBP1.99□□□□□ -2.09
RPN9YDR427W YER085CP40058 173 aa1.99□□□□□ -2.09
RPN9YDR427W YMR144WP40214 342 aaKnown RBP1.99□□□□□ -2.09
RPN9YDR427W RPC17P47076 161 aa1.99□□□□□ -2.09
RPN9YDR427W YJR149WP47177 404 aa1.99□□□□□ -2.09
RPN9YDR427W NOP13P53883 403 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
RPN9YDR427W HTL1Q9URQ5 78 aa1.99□□□□□ -2.09
RPN9YDR427W HSL1P34244 1518 aa1.99□□□□□ -2.09
RPN9YDR427W YHR139C-AO13536 103 aa1.98□□□□□ -2.09
RPN9YDR427W DSF1P0CX08 502 aa1.98□□□□□ -2.09
RPN9YDR427W YNR073CP0CX09 502 aa1.98□□□□□ -2.09
RPN9YDR427W NTF2P33331 125 aaKnown RBP1.98□□□□□ -2.09
RPN9YDR427W VPS21P36017 210 aaKnown RBP1.98□□□□□ -2.09
RPN9YDR427W YPT52P36018 234 aaKnown RBP1.98□□□□□ -2.09
RPN9YDR427W CUE1P38428 203 aa1.98□□□□□ -2.09
RPN9YDR427W CAT5P41735 233 aa1.98□□□□□ -2.09
RPN9YDR427W RPA43P46669 326 aa1.98□□□□□ -2.09
RPN9YDR427W YGR026WP53217 278 aa1.98□□□□□ -2.09
RPN9YDR427W AKR2Q12013 749 aa1.98□□□□□ -2.09
RPN9YDR427W MHT1Q12525 324 aa1.98□□□□□ -2.09
RPN9YDR427W BCY1P07278 416 aaKnown RBP1.97□□□□□ -2.09
RPN9YDR427W RPF1P38805 295 aaKnown RBP1.97□□□□□ -2.09
RPN9YDR427W AYR1P40471 297 aa1.97□□□□□ -2.09
RPN9YDR427W FIS1P40515 155 aa1.97□□□□□ -2.09
RPN9YDR427W HAM1P47119 197 aaKnown RBP1.97□□□□□ -2.09
RPN9YDR427W MCM22P47167 239 aa1.97□□□□□ -2.09
RPN9YDR427W TRM9P49957 279 aa1.97□□□□□ -2.09
RPN9YDR427W TOS8P53147 276 aa1.97□□□□□ -2.09
RPN9YDR427W NIP7Q08962 181 aaKnown RBP1.97□□□□□ -2.09
RPN9YDR427W SIR4P11978 1358 aa1.97□□□□□ -2.09
RPN9YDR427W TCB3Q03640 1545 aaKnown RBP1.96□□□□□ -2.09
RPN9YDR427W CDC10P25342 322 aaKnown RBP1.96□□□□□ -2.1
RPN9YDR427W YJR056CP47115 236 aa1.96□□□□□ -2.1
RPN9YDR427W ILM1P47155 203 aa1.96□□□□□ -2.1
RPN9YDR427W BOL1Q3E793 110 aa1.96□□□□□ -2.1
RPN9YDR427W SPT3P06844 337 aa1.95□□□□□ -2.1
RPN9YDR427W RIB1P38066 345 aa1.95□□□□□ -2.1
RPN9YDR427W PEX17P40155 199 aa1.95□□□□□ -2.1
RPN9YDR427W PRM15Q03262 622 aa1.95□□□□□ -2.1
RPN9YDR427W ATG39Q06159 398 aa1.95□□□□□ -2.1
RPN9YDR427W YOR020W-AQ3E824 90 aa1.95□□□□□ -2.1
RPN9YDR427W RAS2P01120 322 aaKnown RBP1.94□□□□□ -2.1
RPN9YDR427W RHO1P06780 209 aaKnown RBP1.94□□□□□ -2.1
RPN9YDR427W SCL1P21243 252 aaKnown RBP1.94□□□□□ -2.1
RPN9YDR427W ECM33P38248 429 aaKnown RBP1.94□□□□□ -2.1
RPN9YDR427W RTR1P40084 226 aaPredicted RBP1.94□□□□□ -2.1
RPN9YDR427W PRE6P40303 254 aaKnown RBP1.94□□□□□ -2.1
RPN9YDR427W OTU1P43558 301 aa1.94□□□□□ -2.1
RPN9YDR427W TPO4Q12256 659 aa1.94□□□□□ -2.1
RPN9YDR427W SPT6P23615 1451 aaKnown RBP1.94□□□□□ -2.1
RPN9YDR427W DNA2P38859 1522 aa1.93□□□□□ -2.1
RPN9YDR427W HIR3P47171 1648 aa1.93□□□□□ -2.1
RPN9YDR427W THP2O13539 261 aaKnown RBP1.93□□□□□ -2.1
RPN9YDR427W FCY2P17064 533 aa1.93□□□□□ -2.1
RPN9YDR427W GRX2P17695 143 aaKnown RBP1.93□□□□□ -2.1
RPN9YDR427W RPL24BP24000 155 aaKnown RBP1.93□□□□□ -2.1
RPN9YDR427W VMA6P32366 345 aaKnown RBP1.93□□□□□ -2.1
RPN9YDR427W VMA11P32842 164 aa1.93□□□□□ -2.1
RPN9YDR427W BMH2P34730 273 aaKnown RBP1.93□□□□□ -2.1
RPN9YDR427W URA8P38627 578 aaPredicted RBP1.93□□□□□ -2.1
RPN9YDR427W YAR068WP39564 161 aa1.93□□□□□ -2.1
RPN9YDR427W MIC26P50087 233 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms