RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	ATG17	Q06410	417 aa		0.34	□□□□□ -2.36
CSN9	YDR179C	YPR147C	Q06522	304 aa	Known RBP	0.34	□□□□□ -2.36
CSN9	YDR179C	YLR030W	Q07967	263 aa		0.34	□□□□□ -2.36
CSN9	YDR179C	SSA3	P09435	649 aa	Known RBP	0.33	□□□□□ -2.36
CSN9	YDR179C	VPS3	P23643	1011 aa		0.33	□□□□□ -2.36
CSN9	YDR179C	FZF1	P32805	299 aa		0.33	□□□□□ -2.36
CSN9	YDR179C	YKL070W	P36087	169 aa		0.33	□□□□□ -2.36
CSN9	YDR179C	MRX3	P38172	270 aa		0.33	□□□□□ -2.36
CSN9	YDR179C	RRF1	P38771	230 aa		0.33	□□□□□ -2.36
CSN9	YDR179C	YEL067C	P39978	195 aa		0.33	□□□□□ -2.36
CSN9	YDR179C	DDI1	P40087	428 aa		0.33	□□□□□ -2.36
CSN9	YDR179C	YJR012C	P47087	207 aa		0.33	□□□□□ -2.36
CSN9	YDR179C	YJR056C	P47115	236 aa		0.33	□□□□□ -2.36
CSN9	YDR179C	LSB1	P53281	241 aa		0.33	□□□□□ -2.36
CSN9	YDR179C	CDC14	Q00684	551 aa		0.33	□□□□□ -2.36
CSN9	YDR179C	MET16	P18408	261 aa	Predicted RBP	0.32	□□□□□ -2.36
CSN9	YDR179C	TRX1	P22217	103 aa	Known RBP	0.32	□□□□□ -2.36
CSN9	YDR179C	MEI4	P29467	408 aa		0.32	□□□□□ -2.36
CSN9	YDR179C	TVP38	P36164	337 aa		0.32	□□□□□ -2.36
CSN9	YDR179C	THO1	P40040	218 aa	Known RBP	0.32	□□□□□ -2.36
CSN9	YDR179C	MEP1	P40260	492 aa		0.32	□□□□□ -2.36
CSN9	YDR179C	ANT1	Q06497	328 aa		0.32	□□□□□ -2.36
CSN9	YDR179C	YCT1	Q12235	531 aa		0.32	□□□□□ -2.36
CSN9	YDR179C	SWI1	P09547	1314 aa		0.32	□□□□□ -2.36
CSN9	YDR179C	NSP1	P14907	823 aa	Known RBP	0.31	□□□□□ -2.36
CSN9	YDR179C	YPT52	P36018	234 aa	Known RBP	0.31	□□□□□ -2.36
CSN9	YDR179C	MRPL39	P36533	70 aa		0.31	□□□□□ -2.36
CSN9	YDR179C	YAR068W	P39564	161 aa		0.31	□□□□□ -2.36
CSN9	YDR179C	YNL217W	P40152	326 aa		0.31	□□□□□ -2.36
CSN9	YDR179C	YPR172W	Q06608	200 aa		0.31	□□□□□ -2.36
CSN9	YDR179C	PGC1	Q08959	321 aa		0.31	□□□□□ -2.36
CSN9	YDR179C	HIS1	P00498	297 aa	Known RBP	0.3	□□□□□ -2.36
CSN9	YDR179C	YKR104W	P0CE69	306 aa		0.3	□□□□□ -2.36
CSN9	YDR179C	BLI1	P35727	113 aa		0.3	□□□□□ -2.36
CSN9	YDR179C	GPI8	P49018	411 aa		0.3	□□□□□ -2.36
CSN9	YDR179C	BOL2	P53082	120 aa		0.3	□□□□□ -2.36
CSN9	YDR179C	SAY1	P53324	424 aa		0.3	□□□□□ -2.36
CSN9	YDR179C	GMC2	Q06201	188 aa		0.3	□□□□□ -2.36
CSN9	YDR179C	RRP40	Q08285	240 aa	Known RBP	0.3	□□□□□ -2.36
CSN9	YDR179C	YDL180W	Q12301	547 aa		0.3	□□□□□ -2.36
CSN9	YDR179C	YOR020W-A	Q3E824	90 aa		0.3	□□□□□ -2.36
CSN9	YDR179C	HTL1	Q9URQ5	78 aa		0.3	□□□□□ -2.36
CSN9	YDR179C	MSB2	P32334	1306 aa		0.3	□□□□□ -2.36
CSN9	YDR179C	MET5	P47169	1442 aa		0.3	□□□□□ -2.36
CSN9	YDR179C	RSR1	P13856	272 aa		0.29	□□□□□ -2.36
CSN9	YDR179C	PBN1	P25580	416 aa		0.29	□□□□□ -2.36
CSN9	YDR179C	OSW5	P40219	148 aa		0.29	□□□□□ -2.36
CSN9	YDR179C	PGD1	P40356	397 aa		0.29	□□□□□ -2.36
CSN9	YDR179C	HAM1	P47119	197 aa	Known RBP	0.29	□□□□□ -2.36
CSN9	YDR179C	CUS2	P53830	285 aa	Predicted RBP	0.29	□□□□□ -2.36
CSN9	YDR179C	YOR186W	Q08560	144 aa		0.29	□□□□□ -2.36
CSN9	YDR179C	YNL146C-A	Q3E7Z1	64 aa		0.29	□□□□□ -2.36
CSN9	YDR179C	IPP1	P00817	287 aa	Known RBP	0.28	□□□□□ -2.36
CSN9	YDR179C	MEK1	P24719	497 aa	Predicted RBP	0.28	□□□□□ -2.36
CSN9	YDR179C	TFC1	P32367	649 aa		0.28	□□□□□ -2.36
CSN9	YDR179C	RPF1	P38805	295 aa	Known RBP	0.28	□□□□□ -2.36
CSN9	YDR179C	GAA1	P39012	614 aa		0.28	□□□□□ -2.36
CSN9	YDR179C	SOK1	P40317	901 aa		0.28	□□□□□ -2.36
CSN9	YDR179C	SNZ3	P43545	298 aa		0.28	□□□□□ -2.36
CSN9	YDR179C	FMP33	P46998	180 aa		0.28	□□□□□ -2.36
CSN9	YDR179C	PNC1	P53184	216 aa	Known RBP	0.28	□□□□□ -2.36
CSN9	YDR179C	YDR286C	Q05530	114 aa		0.28	□□□□□ -2.36
CSN9	YDR179C	COQ10	Q08058	207 aa		0.28	□□□□□ -2.36
CSN9	YDR179C	RPL27B	P0C2H7	136 aa	Known RBP	0.27	□□□□□ -2.37
CSN9	YDR179C	QRI5	P32344	111 aa		0.27	□□□□□ -2.37
CSN9	YDR179C	JEN1	P36035	616 aa		0.27	□□□□□ -2.37
CSN9	YDR179C	SPG4	Q04438	115 aa		0.27	□□□□□ -2.37
CSN9	YDR179C	YIL002W-A	Q3E7Z5	69 aa		0.27	□□□□□ -2.37
CSN9	YDR179C	CDC8	P00572	216 aa		0.26	□□□□□ -2.37
CSN9	YDR179C	TPM1	P17536	199 aa	Known RBP	0.26	□□□□□ -2.37
CSN9	YDR179C	COA1	P40452	197 aa		0.26	□□□□□ -2.37
CSN9	YDR179C	RPA43	P46669	326 aa		0.26	□□□□□ -2.37
CSN9	YDR179C	GCD14	P46959	383 aa	Predicted RBP	0.26	□□□□□ -2.37
CSN9	YDR179C	ILM1	P47155	203 aa		0.26	□□□□□ -2.37
CSN9	YDR179C	AIF1	P52923	378 aa		0.26	□□□□□ -2.37
CSN9	YDR179C	KAP114	P53067	1004 aa		0.26	□□□□□ -2.37
CSN9	YDR179C	ALG11	P53954	548 aa	Known RBP	0.26	□□□□□ -2.37
CSN9	YDR179C	SSQ1	Q05931	657 aa	Predicted RBP	0.26	□□□□□ -2.37
CSN9	YDR179C	YPR098C	Q06089	161 aa		0.26	□□□□□ -2.37
CSN9	YDR179C	MSA1	Q08471	629 aa		0.26	□□□□□ -2.37
CSN9	YDR179C	MDY2	Q12285	212 aa		0.26	□□□□□ -2.37
CSN9	YDR179C	FMP16	Q12497	93 aa		0.26	□□□□□ -2.37
CSN9	YDR179C	SSK22	P25390	1331 aa	Predicted RBP	0.25	□□□□□ -2.37
CSN9	YDR179C	AQY2	P0CD90	149 aa		0.25	□□□□□ -2.37
CSN9	YDR179C	FCY2	P17064	533 aa		0.25	□□□□□ -2.37
CSN9	YDR179C	SGE1	P33335	543 aa		0.25	□□□□□ -2.37
CSN9	YDR179C	ECM33	P38248	429 aa	Known RBP	0.25	□□□□□ -2.37
CSN9	YDR179C	EDC3	P39998	551 aa	Known RBP	0.25	□□□□□ -2.37
CSN9	YDR179C	ABF2	Q02486	183 aa		0.25	□□□□□ -2.37
CSN9	YDR179C	NIP7	Q08962	181 aa	Known RBP	0.25	□□□□□ -2.37
CSN9	YDR179C	YHR139C-A	O13536	103 aa		0.24	□□□□□ -2.37
CSN9	YDR179C	STF1	P01098	86 aa		0.24	□□□□□ -2.37
CSN9	YDR179C	YET1	P35723	206 aa		0.24	□□□□□ -2.37
CSN9	YDR179C	PRS2	P38620	318 aa	Known RBP	0.24	□□□□□ -2.37
CSN9	YDR179C	ERJ5	P43613	295 aa	Predicted RBP	0.24	□□□□□ -2.37
CSN9	YDR179C	RCE1	Q03530	315 aa		0.24	□□□□□ -2.37
CSN9	YDR179C	REX3	Q12090	404 aa		0.24	□□□□□ -2.37
CSN9	YDR179C	MRP1	P10662	321 aa	Known RBP	0.23	□□□□□ -2.37
CSN9	YDR179C	MRPS28	P21771	286 aa		0.23	□□□□□ -2.37
CSN9	YDR179C	EHD3	P28817	500 aa		0.23	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms