RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A RPS16AP0CX51 143 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A RPS16BP0CX52 143 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A PET54P10834 293 aa-0.29□□□□□ -2.46
TFB5YDR079C-A GCD2P12754 651 aaPredicted RBP-0.29□□□□□ -2.46
TFB5YDR079C-A RPB3P16370 318 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A PHO80P20052 293 aa-0.29□□□□□ -2.46
TFB5YDR079C-A RPB4P20433 221 aaPredicted RBP-0.29□□□□□ -2.46
TFB5YDR079C-A FAR1P21268 830 aa-0.29□□□□□ -2.46
TFB5YDR079C-A AAT2P23542 418 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A PRE7P23724 241 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A EXG1P23776 448 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A GPI12P23797 304 aa-0.29□□□□□ -2.46
TFB5YDR079C-A YIH1P25637 258 aa-0.29□□□□□ -2.46
TFB5YDR079C-A TAH1P25638 111 aaPredicted RBP-0.29□□□□□ -2.46
TFB5YDR079C-A ADE1P27616 306 aa-0.29□□□□□ -2.46
TFB5YDR079C-A IDH1P28834 360 aaKnown RBP RIP-Chip data-0.29□□□□□ -2.46not detected
TFB5YDR079C-A TRR1P29509 319 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A ZIP1P31111 875 aa-0.29□□□□□ -2.46
TFB5YDR079C-A NTG1P31378 399 aa-0.29□□□□□ -2.46
TFB5YDR079C-A FUN26P31381 517 aa-0.29□□□□□ -2.46
TFB5YDR079C-A PUP2P32379 260 aa-0.29□□□□□ -2.46
TFB5YDR079C-A RIM1P32445 135 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A SRB4P32569 687 aa-0.29□□□□□ -2.46
TFB5YDR079C-A SUA5P32579 426 aa-0.29□□□□□ -2.46
TFB5YDR079C-A RAD23P32628 398 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A NPL6P32832 435 aa-0.29□□□□□ -2.46
TFB5YDR079C-A PEX5P35056 612 aa-0.29□□□□□ -2.46
TFB5YDR079C-A TOM20P35180 183 aa-0.29□□□□□ -2.46
TFB5YDR079C-A CBT1P36038 271 aaPredicted RBP-0.29□□□□□ -2.46
TFB5YDR079C-A PAN3P36102 679 aaPredicted RBP-0.29□□□□□ -2.46
TFB5YDR079C-A ETR1P38071 380 aa-0.29□□□□□ -2.46
TFB5YDR079C-A SMP1P38128 452 aa-0.29□□□□□ -2.46
TFB5YDR079C-A OLA1P38219 394 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A CSH1P38287 376 aa-0.29□□□□□ -2.46
TFB5YDR079C-A SLM6P38343 150 aa-0.29□□□□□ -2.46
TFB5YDR079C-A DBP8P38719 431 aa-0.29□□□□□ -2.46
TFB5YDR079C-A YHL041WP38730 149 aa-0.29□□□□□ -2.46
TFB5YDR079C-A YHR045WP38775 560 aa-0.29□□□□□ -2.46
TFB5YDR079C-A COX23P38824 151 aa-0.29□□□□□ -2.46
TFB5YDR079C-A PRM9P39551 298 aa-0.29□□□□□ -2.46
TFB5YDR079C-A BDH1P39714 382 aa-0.29□□□□□ -2.46
TFB5YDR079C-A EDC2P40023 145 aaPredicted RBP-0.29□□□□□ -2.46
TFB5YDR079C-A NSA2P40078 261 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A COX15P40086 486 aa-0.29□□□□□ -2.46
TFB5YDR079C-A LSM5P40089 93 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A PUG1P40100 303 aa-0.29□□□□□ -2.46
TFB5YDR079C-A NDE1P40215 560 aa-0.29□□□□□ -2.46
TFB5YDR079C-A POR2P40478 281 aa-0.29□□□□□ -2.46
TFB5YDR079C-A CAB2P40506 365 aa-0.29□□□□□ -2.46
TFB5YDR079C-A FIS1P40515 155 aa-0.29□□□□□ -2.46
TFB5YDR079C-A GPD2P41911 440 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A PTR3P43606 678 aa-0.29□□□□□ -2.46
TFB5YDR079C-A ALB1P47019 175 aaPredicted RBP-0.29□□□□□ -2.46
TFB5YDR079C-A PET130P47065 347 aa-0.29□□□□□ -2.46
TFB5YDR079C-A TDA4P47153 279 aa-0.29□□□□□ -2.46
TFB5YDR079C-A XPT1P47165 209 aa-0.29□□□□□ -2.46
TFB5YDR079C-A TAN1P53072 289 aaPredicted RBP-0.29□□□□□ -2.46
TFB5YDR079C-A MRM2P53123 320 aa-0.29□□□□□ -2.46
TFB5YDR079C-A CUE3P53137 624 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A MPS2P53159 387 aa-0.29□□□□□ -2.46
TFB5YDR079C-A YGR021WP53212 290 aa-0.29□□□□□ -2.46
TFB5YDR079C-A THG1P53215 237 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A FMP48P53233 369 aa-0.29□□□□□ -2.46
TFB5YDR079C-A RET3P53600 189 aa-0.29□□□□□ -2.46
TFB5YDR079C-A FMP41P53889 259 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A NRK1P53915 240 aa-0.29□□□□□ -2.46
TFB5YDR079C-A RNH201P53942 307 aa-0.29□□□□□ -2.46
TFB5YDR079C-A SLT2Q00772 484 aa-0.29□□□□□ -2.46
TFB5YDR079C-A RPT6Q01939 405 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A MRPL13Q02204 264 aa-0.29□□□□□ -2.46
TFB5YDR079C-A UTP6Q02354 440 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A CTF19Q02732 369 aa-0.29□□□□□ -2.46
TFB5YDR079C-A RPL21AQ02753 160 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A KAP120Q02932 1032 aa-0.29□□□□□ -2.46
TFB5YDR079C-A SNO1Q03144 224 aa-0.29□□□□□ -2.46
TFB5YDR079C-A GOT1Q03554 138 aa-0.29□□□□□ -2.46
TFB5YDR079C-A YMR130WQ04223 302 aa-0.29□□□□□ -2.46
TFB5YDR079C-A LPP1Q04396 274 aa-0.29□□□□□ -2.46
TFB5YDR079C-A YDR115WQ04598 105 aa-0.29□□□□□ -2.46
TFB5YDR079C-A ECM18Q04623 453 aa-0.29□□□□□ -2.46
TFB5YDR079C-A SEI1Q06058 285 aa-0.29□□□□□ -2.46
TFB5YDR079C-A SPO77Q06134 477 aa-0.29□□□□□ -2.46
TFB5YDR079C-A CUR1Q06469 252 aa-0.29□□□□□ -2.46
TFB5YDR079C-A ARV1Q06541 321 aa-0.29□□□□□ -2.46
TFB5YDR079C-A MDM36Q06820 579 aa-0.29□□□□□ -2.46
TFB5YDR079C-A HEM25Q07534 307 aa-0.29□□□□□ -2.46
TFB5YDR079C-A RRP40Q08285 240 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A RDL2Q08742 149 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A RRS1Q08746 203 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A SNX3Q08826 162 aaKnown RBP-0.29□□□□□ -2.46
TFB5YDR079C-A SIA1Q12212 622 aa-0.29□□□□□ -2.46
TFB5YDR079C-A MCT1Q12283 360 aa-0.29□□□□□ -2.46
TFB5YDR079C-A YLR126CQ12288 251 aa-0.29□□□□□ -2.46
TFB5YDR079C-A MED4Q12343 284 aa-0.29□□□□□ -2.46
TFB5YDR079C-A RRI2Q12348 645 aa-0.29□□□□□ -2.46
TFB5YDR079C-A TRM10Q12400 293 aa-0.29□□□□□ -2.46
TFB5YDR079C-A IZH2Q12442 317 aa-0.29□□□□□ -2.46
TFB5YDR079C-A YPR1Q12458 312 aa-0.29□□□□□ -2.46
TFB5YDR079C-A RMD5Q12508 421 aa-0.29□□□□□ -2.46
TFB5YDR079C-A RPL21BQ12672 160 aaKnown RBP-0.29□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 122.5 ms