RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W EMP24P32803 203 aaKnown RBP3.26□□□□□ -1.89
TSR1YDL060W RPS1AP33442 255 aaKnown RBP3.26□□□□□ -1.89
TSR1YDL060W PTI1P39927 425 aaPredicted RBP3.26□□□□□ -1.89
TSR1YDL060W HPA3P39979 161 aa3.26□□□□□ -1.89
TSR1YDL060W ERG28P40030 148 aa3.26□□□□□ -1.89
TSR1YDL060W IDP2P41939 412 aa3.26□□□□□ -1.89
TSR1YDL060W RPE1P46969 238 aa3.26□□□□□ -1.89
TSR1YDL060W YJR056CP47115 236 aa3.26□□□□□ -1.89
TSR1YDL060W SAM50P53969 484 aa3.26□□□□□ -1.89
TSR1YDL060W EMI1Q04406 187 aa3.26□□□□□ -1.89
TSR1YDL060W YLR108CQ12259 485 aa3.26□□□□□ -1.89
TSR1YDL060W SNF8Q12483 233 aa3.26□□□□□ -1.89
TSR1YDL060W VMA9Q3E7B6 73 aa3.26□□□□□ -1.89
TSR1YDL060W CCH1P50077 2039 aa3.26□□□□□ -1.89
TSR1YDL060W REP2P03872 296 aa3.25□□□□□ -1.89
TSR1YDL060W STE18P18852 110 aa3.25□□□□□ -1.89
TSR1YDL060W AIM17P23180 465 aaKnown RBP3.25□□□□□ -1.89
TSR1YDL060W RNA14P25298 677 aaKnown RBP3.25□□□□□ -1.89
TSR1YDL060W DCC1P25559 380 aa3.25□□□□□ -1.89
TSR1YDL060W TAH1P25638 111 aaPredicted RBP3.25□□□□□ -1.89
TSR1YDL060W ATG15P25641 520 aa3.25□□□□□ -1.89
TSR1YDL060W CSG2P35206 410 aa3.25□□□□□ -1.89
TSR1YDL060W YBR241CP38142 488 aa3.25□□□□□ -1.89
TSR1YDL060W KEG1P43614 200 aa3.25□□□□□ -1.89
TSR1YDL060W VPS25P47142 202 aa3.25□□□□□ -1.89
TSR1YDL060W RIF2Q06208 395 aa3.25□□□□□ -1.89
TSR1YDL060W ASR1Q06834 288 aa3.25□□□□□ -1.89
TSR1YDL060W YLR112WQ12130 139 aa3.25□□□□□ -1.89
TSR1YDL060W BSC1Q12140 328 aa3.25□□□□□ -1.89
TSR1YDL060W MEX67Q99257 599 aaKnown RBP3.25□□□□□ -1.89
TSR1YDL060W HIS1P00498 297 aaKnown RBP3.25□□□□□ -1.89
TSR1YDL060W RPL25P04456 142 aaKnown RBP3.25□□□□□ -1.89
TSR1YDL060W COS2P0CX12 379 aa3.25□□□□□ -1.89
TSR1YDL060W COS3P0CX13 379 aa3.25□□□□□ -1.89
TSR1YDL060W AMD1P15274 810 aaKnown RBP3.25□□□□□ -1.89
TSR1YDL060W NDC1P32500 655 aa3.25□□□□□ -1.89
TSR1YDL060W YEF1P32622 495 aa3.25□□□□□ -1.89
TSR1YDL060W ZRT1P32804 376 aa3.25□□□□□ -1.89
TSR1YDL060W PDC2P32896 925 aa3.25□□□□□ -1.89
TSR1YDL060W SSS1P35179 80 aa3.25□□□□□ -1.89
TSR1YDL060W ECM15P35195 104 aa3.25□□□□□ -1.89
TSR1YDL060W SRP102P36057 244 aaPredicted RBP3.25□□□□□ -1.89
TSR1YDL060W SSH1P38353 490 aaKnown RBP3.25□□□□□ -1.89
TSR1YDL060W NSG1P38837 291 aa3.25□□□□□ -1.89
TSR1YDL060W VPS52P39904 641 aa3.25□□□□□ -1.89
TSR1YDL060W ALG8P40351 577 aa3.25□□□□□ -1.89
TSR1YDL060W HHO1P53551 258 aa3.25□□□□□ -1.89
TSR1YDL060W YNR062CP53748 327 aa3.25□□□□□ -1.89
TSR1YDL060W YNL234WP53857 426 aa3.25□□□□□ -1.89
TSR1YDL060W LSM7P53905 115 aaKnown RBP3.25□□□□□ -1.89
TSR1YDL060W RPL15BP54780 204 aaPredicted RBP3.25□□□□□ -1.89
TSR1YDL060W MRPS16Q02608 121 aa3.25□□□□□ -1.89
TSR1YDL060W VBA1Q04301 562 aa3.25□□□□□ -1.89
TSR1YDL060W CDC123Q05791 360 aa3.25□□□□□ -1.89
TSR1YDL060W CDD1Q06549 142 aa3.25□□□□□ -1.89
TSR1YDL060W RRP40Q08285 240 aaKnown RBP3.25□□□□□ -1.89
TSR1YDL060W AKR2Q12013 749 aa3.25□□□□□ -1.89
TSR1YDL060W SRO7Q12038 1033 aa3.25□□□□□ -1.89
TSR1YDL060W MHF1Q3E835 90 aa3.25□□□□□ -1.89
TSR1YDL060W PAB1P04147 577 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
TSR1YDL060W RPL9AP05738 191 aaKnown RBP3.24□□□□□ -1.89
TSR1YDL060W ADH3P07246 375 aaKnown RBP3.24□□□□□ -1.89
TSR1YDL060W PET54P10834 293 aa3.24□□□□□ -1.89
TSR1YDL060W RBK1P25332 333 aa3.24□□□□□ -1.89
TSR1YDL060W TMA19P35691 167 aaKnown RBP3.24□□□□□ -1.89
TSR1YDL060W YBR096WP38256 230 aa3.24□□□□□ -1.89
TSR1YDL060W SEN34P39707 275 aa3.24□□□□□ -1.89
TSR1YDL060W THO1P40040 218 aaKnown RBP3.24□□□□□ -1.89
TSR1YDL060W MPM1P40364 252 aa3.24□□□□□ -1.89
TSR1YDL060W MEP2P41948 499 aa3.24□□□□□ -1.89
TSR1YDL060W TIS11P47977 285 aa3.24□□□□□ -1.89
TSR1YDL060W RPL9BP51401 191 aaKnown RBP3.24□□□□□ -1.89
TSR1YDL060W YCL001W-AP87012 153 aa3.24□□□□□ -1.89
TSR1YDL060W CDC14Q00684 551 aa3.24□□□□□ -1.89
TSR1YDL060W CCE1Q03702 353 aa3.24□□□□□ -1.89
TSR1YDL060W MRPL51Q06090 140 aaPredicted RBP3.24□□□□□ -1.89
TSR1YDL060W YPR063CQ12160 140 aa3.24□□□□□ -1.89
TSR1YDL060W TPT1Q12272 230 aaKnown RBP3.24□□□□□ -1.89
TSR1YDL060W RRP42Q12277 265 aaPredicted RBP3.24□□□□□ -1.89
TSR1YDL060W SPS2P08459 502 aa3.24□□□□□ -1.89
TSR1YDL060W RPL27AP0C2H6 136 aaKnown RBP3.24□□□□□ -1.89
TSR1YDL060W RPL27BP0C2H7 136 aaKnown RBP3.24□□□□□ -1.89
TSR1YDL060W EXG1P23776 448 aaKnown RBP3.24□□□□□ -1.89
TSR1YDL060W TIP1P27654 210 aaPredicted RBP3.24□□□□□ -1.89
TSR1YDL060W MRPL6P32904 214 aa3.24□□□□□ -1.89
TSR1YDL060W TVP38P36164 337 aa3.24□□□□□ -1.89
TSR1YDL060W ATG8P38182 117 aaRIP-Chip data3.24□□□□□ -1.89not detected
TSR1YDL060W ERV15P38312 142 aa3.24□□□□□ -1.89
TSR1YDL060W PRS3P38689 320 aaKnown RBP3.24□□□□□ -1.89
TSR1YDL060W YER188WP40103 239 aa3.24□□□□□ -1.89
TSR1YDL060W IBA57P47158 497 aa3.24□□□□□ -1.89
TSR1YDL060W PRM8P53174 237 aa3.24□□□□□ -1.89
TSR1YDL060W ERV29P53337 310 aa3.24□□□□□ -1.89
TSR1YDL060W HCH1P53834 153 aa3.24□□□□□ -1.89
TSR1YDL060W DIA1P54005 336 aa3.24□□□□□ -1.89
TSR1YDL060W YPL077CQ02831 240 aa3.24□□□□□ -1.89
TSR1YDL060W PRM15Q03262 622 aa3.24□□□□□ -1.89
TSR1YDL060W NEJ1Q06148 342 aa3.24□□□□□ -1.89
TSR1YDL060W TIM18Q08749 192 aa3.24□□□□□ -1.89
TSR1YDL060W TMS1Q12116 473 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms