RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	RRP40	Q08285	240 aa	Known RBP	0.37	□□□□□ -2.35
HMRA2	YCR096C	MSA1	Q08471	629 aa		0.37	□□□□□ -2.35
HMRA2	YCR096C	SYC1	Q08553	188 aa	Predicted RBP	0.37	□□□□□ -2.35
HMRA2	YCR096C	YOR186W	Q08560	144 aa		0.37	□□□□□ -2.35
HMRA2	YCR096C	SSA3	P09435	649 aa	Known RBP	0.36	□□□□□ -2.35
HMRA2	YCR096C	SNA3	P14359	133 aa		0.36	□□□□□ -2.35
HMRA2	YCR096C	PET9	P18239	318 aa	Known RBP	0.36	□□□□□ -2.35
HMRA2	YCR096C	RPS5	P26783	225 aa	Known RBP	0.36	□□□□□ -2.35
HMRA2	YCR096C	UPS2	P35200	230 aa		0.36	□□□□□ -2.35
HMRA2	YCR096C	YPT52	P36018	234 aa	Known RBP	0.36	□□□□□ -2.35
HMRA2	YCR096C	THO1	P40040	218 aa	Known RBP	0.36	□□□□□ -2.35
HMRA2	YCR096C	RPA43	P46669	326 aa		0.36	□□□□□ -2.35
HMRA2	YCR096C	GLG2	P47011	380 aa		0.36	□□□□□ -2.35
HMRA2	YCR096C	KAP114	P53067	1004 aa		0.36	□□□□□ -2.35
HMRA2	YCR096C	YNL046W	P53956	172 aa		0.36	□□□□□ -2.35
HMRA2	YCR096C	SPG3	Q04398	127 aa	Predicted RBP	0.36	□□□□□ -2.35
HMRA2	YCR096C	SPG4	Q04438	115 aa		0.36	□□□□□ -2.35
HMRA2	YCR096C	FAR8	Q05040	523 aa		0.36	□□□□□ -2.35
HMRA2	YCR096C	ATG39	Q06159	398 aa		0.36	□□□□□ -2.35
HMRA2	YCR096C	YPR172W	Q06608	200 aa		0.36	□□□□□ -2.35
HMRA2	YCR096C	HEM25	Q07534	307 aa		0.36	□□□□□ -2.35
HMRA2	YCR096C	USB1	Q12208	290 aa	Known RBP	0.36	□□□□□ -2.35
HMRA2	YCR096C	SNF8	Q12483	233 aa		0.36	□□□□□ -2.35
HMRA2	YCR096C	SLH1	P53327	1967 aa	Known RBP	0.36	□□□□□ -2.35
HMRA2	YCR096C	RPL9A	P05738	191 aa	Known RBP	0.35	□□□□□ -2.35
HMRA2	YCR096C	POL30	P15873	258 aa	Known RBP	0.35	□□□□□ -2.35
HMRA2	YCR096C	VPS3	P23643	1011 aa		0.35	□□□□□ -2.35
HMRA2	YCR096C	HOM6	P31116	359 aa	Known RBP	0.35	□□□□□ -2.35
HMRA2	YCR096C	FZO1	P38297	855 aa		0.35	□□□□□ -2.35
HMRA2	YCR096C	RPL13B	P40212	199 aa	Known RBP	0.35	□□□□□ -2.35
HMRA2	YCR096C	YIL001W	P40560	513 aa		0.35	□□□□□ -2.35
HMRA2	YCR096C	RPL9B	P51401	191 aa	Known RBP	0.35	□□□□□ -2.35
HMRA2	YCR096C	TOS8	P53147	276 aa		0.35	□□□□□ -2.35
HMRA2	YCR096C	ERV25	P54837	211 aa	Known RBP	0.35	□□□□□ -2.35
HMRA2	YCR096C	BUD25	P85052	153 aa		0.35	□□□□□ -2.35
HMRA2	YCR096C	YPR098C	Q06089	161 aa		0.35	□□□□□ -2.35
HMRA2	YCR096C	ATG17	Q06410	417 aa		0.35	□□□□□ -2.35
HMRA2	YCR096C	NIP7	Q08962	181 aa	Known RBP	0.35	□□□□□ -2.35
HMRA2	YCR096C	RPL13A	Q12690	199 aa	Predicted RBP	0.35	□□□□□ -2.35
HMRA2	YCR096C	ACC1	Q00955	2233 aa	Known RBP	0.34	□□□□□ -2.35
HMRA2	YCR096C	TCD1	P38756	429 aa		0.34	□□□□□ -2.36
HMRA2	YCR096C	FIS1	P40515	155 aa		0.34	□□□□□ -2.36
HMRA2	YCR096C	RPL33B	P41056	107 aa	Known RBP	0.34	□□□□□ -2.36
HMRA2	YCR096C	JHD2	P47156	728 aa	Predicted RBP	0.34	□□□□□ -2.36
HMRA2	YCR096C	RPL37A	P49166	88 aa	Known RBP	0.34	□□□□□ -2.36
HMRA2	YCR096C	ALG11	P53954	548 aa	Known RBP	0.34	□□□□□ -2.36
HMRA2	YCR096C	TRM12	Q04235	462 aa		0.34	□□□□□ -2.36
HMRA2	YCR096C	YPL257W	Q08974	193 aa		0.34	□□□□□ -2.36
HMRA2	YCR096C	IPP1	P00817	287 aa	Known RBP	0.33	□□□□□ -2.36
HMRA2	YCR096C	QCR8	P08525	94 aa		0.33	□□□□□ -2.36
HMRA2	YCR096C	GPA2	P10823	449 aa		0.33	□□□□□ -2.36
HMRA2	YCR096C	TCP1	P12612	559 aa	Known RBP	0.33	□□□□□ -2.36
HMRA2	YCR096C	DAL80	P26343	269 aa		0.33	□□□□□ -2.36
HMRA2	YCR096C	SGE1	P33335	543 aa		0.33	□□□□□ -2.36
HMRA2	YCR096C	MRPL39	P36533	70 aa		0.33	□□□□□ -2.36
HMRA2	YCR096C	ECM33	P38248	429 aa	Known RBP	0.33	□□□□□ -2.36
HMRA2	YCR096C	BIG1	P38813	335 aa		0.33	□□□□□ -2.36
HMRA2	YCR096C	YAR068W	P39564	161 aa		0.33	□□□□□ -2.36
HMRA2	YCR096C	MEP1	P40260	492 aa		0.33	□□□□□ -2.36
HMRA2	YCR096C	YAR1	P46683	200 aa		0.33	□□□□□ -2.36
HMRA2	YCR096C	BOL2	P53082	120 aa		0.33	□□□□□ -2.36
HMRA2	YCR096C	MPA43	P53583	542 aa	Predicted RBP	0.33	□□□□□ -2.36
HMRA2	YCR096C	RHO3	Q00245	231 aa	Known RBP	0.33	□□□□□ -2.36
HMRA2	YCR096C	EGD1	Q02642	157 aa	Known RBP	0.33	□□□□□ -2.36
HMRA2	YCR096C	AQY2	P0CD90	149 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	MRP1	P10662	321 aa	Known RBP	0.32	□□□□□ -2.36
HMRA2	YCR096C	RSR1	P13856	272 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	FCY2	P17064	533 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	ERD2	P18414	219 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	FZF1	P32805	299 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	VPS21	P36017	210 aa	Known RBP	0.32	□□□□□ -2.36
HMRA2	YCR096C	MRPL37	P36532	105 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	RRF1	P38771	230 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	RPF1	P38805	295 aa	Known RBP	0.32	□□□□□ -2.36
HMRA2	YCR096C	SVP26	P38869	228 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	YRB2	P40517	327 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	CAT5	P41735	233 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	YJR079W	P47126	109 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	RMR1	P53060	241 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	USE1	P53146	245 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	ERV29	P53337	310 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	YDR209C	Q03480	137 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	RIO1	Q12196	484 aa	Known RBP	0.32	□□□□□ -2.36
HMRA2	YCR096C	YIL002W-A	Q3E7Z5	69 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	HTL1	Q9URQ5	78 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	PDR18	P53756	1333 aa		0.32	□□□□□ -2.36
HMRA2	YCR096C	VAR1	P02381	398 aa		0.31	□□□□□ -2.36
HMRA2	YCR096C	RPL27B	P0C2H7	136 aa	Known RBP	0.31	□□□□□ -2.36
HMRA2	YCR096C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.31	□□□□□ -2.36	not detected
HMRA2	YCR096C	TIR3	P40552	269 aa		0.31	□□□□□ -2.36
HMRA2	YCR096C	YJR056C	P47115	236 aa		0.31	□□□□□ -2.36
HMRA2	YCR096C	EMC2	P47133	292 aa	Known RBP	0.31	□□□□□ -2.36
HMRA2	YCR096C	YNR077C	P53758	84 aa		0.31	□□□□□ -2.36
HMRA2	YCR096C	ADH6	Q04894	360 aa	Known RBP	0.31	□□□□□ -2.36
HMRA2	YCR096C	SEI1	Q06058	285 aa		0.31	□□□□□ -2.36
HMRA2	YCR096C	RRS1	Q08746	203 aa	Known RBP	0.31	□□□□□ -2.36
HMRA2	YCR096C	CDC8	P00572	216 aa		0.3	□□□□□ -2.36
HMRA2	YCR096C	CPA1	P07258	411 aa	Known RBP	0.3	□□□□□ -2.36
HMRA2	YCR096C	DAL82	P21705	255 aa		0.3	□□□□□ -2.36
HMRA2	YCR096C	MEI4	P29467	408 aa		0.3	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 184.3 ms