RNA–Protein interactions for RNA: YCR047C

BUD23, Transcript of Methyltransferase, yeast

Gene BUD23, Length 828 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD23	YCR047C	PHO23	P50947	330 aa		11.67	□□□□□ -0.54
BUD23	YCR047C	YNR048W	P53740	393 aa		11.67	□□□□□ -0.54
BUD23	YCR047C	CWC25	P53854	179 aa	Known RBP	11.67	□□□□□ -0.54
BUD23	YCR047C	DFG5	Q05031	458 aa		11.67	□□□□□ -0.54
BUD23	YCR047C	ACC1	Q00955	2233 aa	Known RBP	11.67	□□□□□ -0.54
BUD23	YCR047C	QCR2	P07257	368 aa		11.66	□□□□□ -0.54
BUD23	YCR047C	RPL30	P14120	105 aa	Known RBP	11.66	□□□□□ -0.54
BUD23	YCR047C	MRT4	P33201	236 aa	Known RBP	11.66	□□□□□ -0.54
BUD23	YCR047C	LAG1	P38703	411 aa		11.66	□□□□□ -0.54
BUD23	YCR047C	RPL13B	P40212	199 aa	Known RBP	11.66	□□□□□ -0.54
BUD23	YCR047C	GNA1	P43577	159 aa	Predicted RBP	11.66	□□□□□ -0.54
BUD23	YCR047C	ALG9	P53868	555 aa	Known RBP	11.66	□□□□□ -0.54
BUD23	YCR047C	ODC1	Q03028	310 aa		11.66	□□□□□ -0.54
BUD23	YCR047C	RPL13A	Q12690	199 aa	Predicted RBP	11.66	□□□□□ -0.54
BUD23	YCR047C	UBA3	Q99344	299 aa		11.66	□□□□□ -0.54
BUD23	YCR047C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	11.65	□□□□□ -0.54	not detected
BUD23	YCR047C	SSA3	P09435	649 aa	Known RBP	11.65	□□□□□ -0.54
BUD23	YCR047C	KAE1	P36132	386 aa		11.65	□□□□□ -0.54
BUD23	YCR047C	YBR197C	P38306	217 aa		11.65	□□□□□ -0.54
BUD23	YCR047C	BUL1	P48524	976 aa		11.65	□□□□□ -0.54
BUD23	YCR047C	HAS1	Q03532	505 aa	Known RBP	11.65	□□□□□ -0.54
BUD23	YCR047C	YDL086W	Q07505	273 aa		11.65	□□□□□ -0.54
BUD23	YCR047C	CDC28	P00546	298 aa	Known RBP	11.64	□□□□□ -0.55
BUD23	YCR047C	YFR010W-A	P0C5N0	62 aa		11.64	□□□□□ -0.55
BUD23	YCR047C	PEX4	P29340	183 aa		11.64	□□□□□ -0.55
BUD23	YCR047C	LDS1	P31379	325 aa		11.64	□□□□□ -0.55
BUD23	YCR047C	ECM25	P32525	599 aa		11.64	□□□□□ -0.55
BUD23	YCR047C	SRB6	P32570	121 aa		11.64	□□□□□ -0.55
BUD23	YCR047C	FAT1	P38225	669 aa		11.64	□□□□□ -0.55
BUD23	YCR047C	PRY1	P47032	299 aa		11.64	□□□□□ -0.55
BUD23	YCR047C	GNP1	P48813	663 aa		11.64	□□□□□ -0.55
BUD23	YCR047C	YGL117W	P53133	265 aa		11.64	□□□□□ -0.55
BUD23	YCR047C	EST3	Q03096	181 aa		11.64	□□□□□ -0.55
BUD23	YCR047C	NUP53	Q03790	475 aa		11.64	□□□□□ -0.55
BUD23	YCR047C	THI74	Q04083	370 aa		11.64	□□□□□ -0.55
BUD23	YCR047C	USB1	Q12208	290 aa	Known RBP	11.64	□□□□□ -0.55
BUD23	YCR047C	RPS16A	P0CX51	143 aa	Known RBP	11.63	□□□□□ -0.55
BUD23	YCR047C	RPS16B	P0CX52	143 aa	Known RBP	11.63	□□□□□ -0.55
BUD23	YCR047C	MCM1	P11746	286 aa		11.63	□□□□□ -0.55
BUD23	YCR047C	SED4	P25365	1065 aa		11.63	□□□□□ -0.55
BUD23	YCR047C	LNP1	P38878	278 aa		11.63	□□□□□ -0.55
BUD23	YCR047C	YJL016W	P47072	561 aa		11.63	□□□□□ -0.55
BUD23	YCR047C	YJR011C	P47086	261 aa	Predicted RBP	11.63	□□□□□ -0.55
BUD23	YCR047C	SRP1	Q02821	542 aa	Known RBP	11.63	□□□□□ -0.55
BUD23	YCR047C	YDR209C	Q03480	137 aa		11.63	□□□□□ -0.55
BUD23	YCR047C	BER1	Q06688	274 aa	Known RBP	11.63	□□□□□ -0.55
BUD23	YCR047C	YCT1	Q12235	531 aa		11.63	□□□□□ -0.55
BUD23	YCR047C	TDH1	P00360	332 aa	Known RBP	11.62	□□□□□ -0.55
BUD23	YCR047C	UBI4	P0CG63	381 aa	Known RBP	11.62	□□□□□ -0.55
BUD23	YCR047C	RPL40A	P0CH08	128 aa	Known RBP	11.62	□□□□□ -0.55
BUD23	YCR047C	RPL40B	P0CH09	128 aa	Known RBP	11.62	□□□□□ -0.55
BUD23	YCR047C	YND1	P40009	630 aa		11.62	□□□□□ -0.55
BUD23	YCR047C	MID1	P41821	548 aa		11.62	□□□□□ -0.55
BUD23	YCR047C	MRPL19	P53875	158 aa		11.62	□□□□□ -0.55
BUD23	YCR047C	MED4	Q12343	284 aa		11.62	□□□□□ -0.55
BUD23	YCR047C	NUD1	P32336	851 aa		11.61	□□□□□ -0.55
BUD23	YCR047C	ATF1	P40353	525 aa		11.61	□□□□□ -0.55
BUD23	YCR047C	GPP1	P41277	250 aa	Known RBP	11.61	□□□□□ -0.55
BUD23	YCR047C	ADO1	P47143	340 aa	Known RBP	11.61	□□□□□ -0.55
BUD23	YCR047C	SNN1	P48232	102 aa		11.61	□□□□□ -0.55
BUD23	YCR047C	UFD1	P53044	361 aa		11.61	□□□□□ -0.55
BUD23	YCR047C	RRT7	Q07829	113 aa		11.61	□□□□□ -0.55
BUD23	YCR047C	HUT1	Q12520	339 aa		11.61	□□□□□ -0.55
BUD23	YCR047C	ZRC1	P20107	442 aa		11.6	□□□□□ -0.55
BUD23	YCR047C	MGE1	P38523	228 aa		11.6	□□□□□ -0.55
BUD23	YCR047C	GPI16	P38875	610 aa		11.6	□□□□□ -0.55
BUD23	YCR047C	PBP1	P53297	722 aa	Known RBP	11.6	□□□□□ -0.55
BUD23	YCR047C	TNA1	P53322	534 aa		11.6	□□□□□ -0.55
BUD23	YCR047C	HOL1	P53389	586 aa		11.6	□□□□□ -0.55
BUD23	YCR047C	YLR146W-A	Q2V2P1	62 aa		11.6	□□□□□ -0.55
BUD23	YCR047C	VMA9	Q3E7B6	73 aa		11.6	□□□□□ -0.55
BUD23	YCR047C	YCR101C	P25607	182 aa		11.59	□□□□□ -0.55
BUD23	YCR047C	COQ2	P32378	372 aa		11.59	□□□□□ -0.55
BUD23	YCR047C	XBP1	P40489	647 aa		11.59	□□□□□ -0.55
BUD23	YCR047C	YIL024C	P40543	189 aa		11.59	□□□□□ -0.55
BUD23	YCR047C	SDO1	Q07953	250 aa	Known RBP	11.59	□□□□□ -0.55
BUD23	YCR047C	RFU1	Q08003	200 aa		11.59	□□□□□ -0.55
BUD23	YCR047C	THI72	Q08579	599 aa		11.59	□□□□□ -0.55
BUD23	YCR047C	ATP16	Q12165	160 aa		11.59	□□□□□ -0.55
BUD23	YCR047C	IZH2	Q12442	317 aa		11.59	□□□□□ -0.55
BUD23	YCR047C	YLR365W	Q7LIF2	110 aa		11.59	□□□□□ -0.55
BUD23	YCR047C	CBP6	P07253	162 aa	Predicted RBP	11.58	□□□□□ -0.56
BUD23	YCR047C	STE4	P18851	423 aa		11.58	□□□□□ -0.56
BUD23	YCR047C	VMA3	P25515	160 aa		11.58	□□□□□ -0.56
BUD23	YCR047C	VMA8	P32610	256 aa	Known RBP	11.58	□□□□□ -0.56
BUD23	YCR047C	POP2	P39008	433 aa		11.58	□□□□□ -0.56
BUD23	YCR047C	AGX1	P43567	385 aa		11.58	□□□□□ -0.56
BUD23	YCR047C	SSN8	P47821	323 aa		11.58	□□□□□ -0.56
BUD23	YCR047C	ATG4	P53867	494 aa		11.58	□□□□□ -0.56
BUD23	YCR047C	GPI15	P53961	229 aa		11.58	□□□□□ -0.56
BUD23	YCR047C	ERP1	Q05359	219 aa	Known RBP	11.58	□□□□□ -0.56
BUD23	YCR047C	SPS4	P09937	338 aa		11.57	□□□□□ -0.56
BUD23	YCR047C	OCH1	P31755	480 aa		11.57	□□□□□ -0.56
BUD23	YCR047C	REC114	P32841	428 aa		11.57	□□□□□ -0.56
BUD23	YCR047C	IRC24	P40580	263 aa		11.57	□□□□□ -0.56
BUD23	YCR047C	RPA34	P47006	233 aa	Predicted RBP	11.57	□□□□□ -0.56
BUD23	YCR047C	FMP41	P53889	259 aa	Known RBP	11.57	□□□□□ -0.56
BUD23	YCR047C	YDR391C	Q04170	232 aa		11.57	□□□□□ -0.56
BUD23	YCR047C	COQ11	Q05892	277 aa		11.57	□□□□□ -0.56
BUD23	YCR047C	FCF2	Q12035	217 aa	Predicted RBP	11.57	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 57 ms