RNA–Protein interactions for RNA: YAL009W

SPO7, Transcript of Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme, yeast

Gene SPO7, Length 780 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO7	YAL009W	YER079W	P40052	210 aa	Known RBP	4.87	□□□□□ -1.63
SPO7	YAL009W	PMT6	P42934	759 aa		4.87	□□□□□ -1.63
SPO7	YAL009W	GON7	P46984	123 aa		4.87	□□□□□ -1.63
SPO7	YAL009W	UTP15	Q04305	513 aa	Known RBP	4.87	□□□□□ -1.63
SPO7	YAL009W	YOL114C	Q12322	202 aa		4.87	□□□□□ -1.63
SPO7	YAL009W	FRE6	Q12473	712 aa		4.87	□□□□□ -1.63
SPO7	YAL009W	YMR105W-A	Q8TGS8	64 aa		4.87	□□□□□ -1.63
SPO7	YAL009W	VCX1	Q99385	411 aa		4.87	□□□□□ -1.63
SPO7	YAL009W	HXT2	P23585	541 aa		4.86	□□□□□ -1.63
SPO7	YAL009W	TIF3	P34167	436 aa	Known RBP	4.86	□□□□□ -1.63
SPO7	YAL009W	SSH1	P38353	490 aa	Known RBP	4.86	□□□□□ -1.63
SPO7	YAL009W	YLF2	P38746	405 aa		4.86	□□□□□ -1.63
SPO7	YAL009W	YND1	P40009	630 aa		4.86	□□□□□ -1.63
SPO7	YAL009W	ERJ5	P43613	295 aa	Predicted RBP	4.86	□□□□□ -1.63
SPO7	YAL009W	YJR120W	P47157	116 aa		4.86	□□□□□ -1.63
SPO7	YAL009W	SRB7	P47822	140 aa		4.86	□□□□□ -1.63
SPO7	YAL009W	TAF4	P50105	388 aa		4.86	□□□□□ -1.63
SPO7	YAL009W	PAU12	P53343	120 aa		4.86	□□□□□ -1.63
SPO7	YAL009W	YKR005C	Q02203	525 aa		4.86	□□□□□ -1.63
SPO7	YAL009W	YDR248C	Q03786	193 aa		4.86	□□□□□ -1.63
SPO7	YAL009W	TSR2	Q06672	205 aa	Known RBP	4.86	□□□□□ -1.63
SPO7	YAL009W	ASR1	Q06834	288 aa		4.86	□□□□□ -1.63
SPO7	YAL009W	HEM25	Q07534	307 aa		4.86	□□□□□ -1.63
SPO7	YAL009W	RFU1	Q08003	200 aa		4.86	□□□□□ -1.63
SPO7	YAL009W	FCY22	Q12119	530 aa		4.86	□□□□□ -1.63
SPO7	YAL009W	TRM10	Q12400	293 aa		4.86	□□□□□ -1.63
SPO7	YAL009W	YPR1	Q12458	312 aa		4.86	□□□□□ -1.63
SPO7	YAL009W	TDH2	P00358	332 aa	Known RBP	4.85	□□□□□ -1.63
SPO7	YAL009W	AFG1	P32317	509 aa		4.85	□□□□□ -1.63
SPO7	YAL009W	PPZ2	P33329	710 aa		4.85	□□□□□ -1.63
SPO7	YAL009W	MTH1	P35198	433 aa		4.85	□□□□□ -1.63
SPO7	YAL009W	PAU24	P38155	120 aa		4.85	□□□□□ -1.63
SPO7	YAL009W	GPI18	P38211	433 aa		4.85	□□□□□ -1.63
SPO7	YAL009W	IES5	P40060	125 aa		4.85	□□□□□ -1.63
SPO7	YAL009W	AVT4	P50944	713 aa		4.85	□□□□□ -1.63
SPO7	YAL009W	YGL204C	P53089	101 aa		4.85	□□□□□ -1.63
SPO7	YAL009W	NSA1	P53136	463 aa	Predicted RBP	4.85	□□□□□ -1.63
SPO7	YAL009W	POP6	P53218	158 aa		4.85	□□□□□ -1.63
SPO7	YAL009W	CAC2	Q04199	468 aa		4.85	□□□□□ -1.63
SPO7	YAL009W	PRP11	Q07350	266 aa	Predicted RBP	4.85	□□□□□ -1.63
SPO7	YAL009W	GRC3	Q07845	632 aa		4.85	□□□□□ -1.63
SPO7	YAL009W	IRC25	Q07951	179 aa		4.85	□□□□□ -1.63
SPO7	YAL009W	TGS1	Q12052	315 aa		4.85	□□□□□ -1.63
SPO7	YAL009W	TMA17	Q12513	150 aa		4.85	□□□□□ -1.63
SPO7	YAL009W	Q0142	Q9ZZW4	58 aa		4.85	□□□□□ -1.63
SPO7	YAL009W	COX9	P07255	59 aa		4.84	□□□□□ -1.63
SPO7	YAL009W	MRP1	P10662	321 aa	Known RBP	4.84	□□□□□ -1.63
SPO7	YAL009W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
SPO7	YAL009W	IES6	P32617	166 aa		4.84	□□□□□ -1.63
SPO7	YAL009W	VPS17	P32913	551 aa		4.84	□□□□□ -1.63
SPO7	YAL009W	SSZ1	P38788	538 aa	Known RBP	4.84	□□□□□ -1.63
SPO7	YAL009W	AVT6	P40074	448 aa		4.84	□□□□□ -1.63
SPO7	YAL009W	RIO2	P40160	425 aa	Known RBP	4.84	□□□□□ -1.63
SPO7	YAL009W	PMT5	P52867	743 aa		4.84	□□□□□ -1.63
SPO7	YAL009W	PIN3	Q06449	215 aa		4.84	□□□□□ -1.63
SPO7	YAL009W	YDL009C	Q12210	107 aa		4.84	□□□□□ -1.63
SPO7	YAL009W	MPD1	Q12404	318 aa	Known RBP	4.84	□□□□□ -1.63
SPO7	YAL009W	MED11	Q99278	115 aa		4.84	□□□□□ -1.63
SPO7	YAL009W	CDC28	P00546	298 aa	Known RBP	4.83	□□□□□ -1.64
SPO7	YAL009W	REP2	P03872	296 aa		4.83	□□□□□ -1.64
SPO7	YAL009W	MRPS28	P21771	286 aa		4.83	□□□□□ -1.64
SPO7	YAL009W	IMP1	P28627	190 aa		4.83	□□□□□ -1.64
SPO7	YAL009W	MTC7	P32633	139 aa		4.83	□□□□□ -1.64
SPO7	YAL009W	MSS2	P40990	351 aa		4.83	□□□□□ -1.64
SPO7	YAL009W	BUD8	P41698	603 aa		4.83	□□□□□ -1.64
SPO7	YAL009W	PIR5	P46999	287 aa		4.83	□□□□□ -1.64
SPO7	YAL009W	YJR096W	P47137	282 aa		4.83	□□□□□ -1.64
SPO7	YAL009W	WSC2	P53832	503 aa		4.83	□□□□□ -1.64
SPO7	YAL009W	ARG5,6	Q01217	863 aa		4.83	□□□□□ -1.64
SPO7	YAL009W	ASM4	Q05166	528 aa		4.83	□□□□□ -1.64
SPO7	YAL009W	MCM21	Q06675	368 aa		4.83	□□□□□ -1.64
SPO7	YAL009W	EAF3	Q12432	401 aa		4.83	□□□□□ -1.64
SPO7	YAL009W	HUT1	Q12520	339 aa		4.83	□□□□□ -1.64
SPO7	YAL009W	MET17	P06106	444 aa		4.82	□□□□□ -1.64
SPO7	YAL009W	ADK1	P07170	222 aa	Known RBP	4.82	□□□□□ -1.64
SPO7	YAL009W	MATALPHA1	P0CY06	175 aa		4.82	□□□□□ -1.64
SPO7	YAL009W	HMLALPHA1	P0CY07	175 aa		4.82	□□□□□ -1.64
SPO7	YAL009W	PRE7	P23724	241 aa	Known RBP	4.82	□□□□□ -1.64
SPO7	YAL009W	CNE1	P27825	502 aa		4.82	□□□□□ -1.64
SPO7	YAL009W	ERG24	P32462	438 aa	Known RBP	4.82	□□□□□ -1.64
SPO7	YAL009W	DOA4	P32571	926 aa		4.82	□□□□□ -1.64
SPO7	YAL009W	RCN1	P36054	211 aa		4.82	□□□□□ -1.64
SPO7	YAL009W	PDS1	P40316	373 aa	Predicted RBP	4.82	□□□□□ -1.64
SPO7	YAL009W	MAK3	Q03503	176 aa		4.82	□□□□□ -1.64
SPO7	YAL009W	YMR254C	Q04838	102 aa		4.82	□□□□□ -1.64
SPO7	YAL009W	PEX30	Q06169	523 aa		4.82	□□□□□ -1.64
SPO7	YAL009W	LUC7	Q07508	261 aa	Predicted RBP	4.82	□□□□□ -1.64
SPO7	YAL009W	YLR099W-A	Q3E798	87 aa		4.82	□□□□□ -1.64
SPO7	YAL009W	RPL25	P04456	142 aa	Known RBP	4.81	□□□□□ -1.64
SPO7	YAL009W	ARO7	P32178	256 aa		4.81	□□□□□ -1.64
SPO7	YAL009W	ACH1	P32316	526 aa		4.81	□□□□□ -1.64
SPO7	YAL009W	SNC2	P33328	115 aa		4.81	□□□□□ -1.64
SPO7	YAL009W	SFK1	P35735	353 aa		4.81	□□□□□ -1.64
SPO7	YAL009W	NAT2	P37293	288 aa		4.81	□□□□□ -1.64
SPO7	YAL009W	LNP1	P38878	278 aa		4.81	□□□□□ -1.64
SPO7	YAL009W	NVJ1	P38881	321 aa		4.81	□□□□□ -1.64
SPO7	YAL009W	SSN8	P47821	323 aa		4.81	□□□□□ -1.64
SPO7	YAL009W	YLR283W	Q05867	314 aa		4.81	□□□□□ -1.64
SPO7	YAL009W	RBD2	Q12270	262 aa		4.81	□□□□□ -1.64
SPO7	YAL009W	ORT1	Q12375	292 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms