RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDB1	YPR184W	IRC18	P47056	224 aa		4.58	□□□□□ -1.68
GDB1	YPR184W	YGR149W	P48236	432 aa		4.58	□□□□□ -1.68
GDB1	YPR184W	FMP48	P53233	369 aa		4.58	□□□□□ -1.68
GDB1	YPR184W	VHT1	P53241	593 aa		4.58	□□□□□ -1.68
GDB1	YPR184W	TY1A-MR1	Q04215	440 aa		4.58	□□□□□ -1.68
GDB1	YPR184W	YLR179C	Q06252	201 aa	Known RBP	4.58	□□□□□ -1.68
GDB1	YPR184W	RAF1	Q06891	181 aa		4.58	□□□□□ -1.68
GDB1	YPR184W	TY1A-BL	Q12266	440 aa		4.58	□□□□□ -1.68
GDB1	YPR184W	SCS22	Q6Q595	175 aa		4.58	□□□□□ -1.68
GDB1	YPR184W	IPP1	P00817	287 aa	Known RBP	4.58	□□□□□ -1.68
GDB1	YPR184W	PTC6	P25646	442 aa		4.58	□□□□□ -1.68
GDB1	YPR184W	AGP3	P43548	558 aa		4.58	□□□□□ -1.68
GDB1	YPR184W	PAU12	P53343	120 aa		4.58	□□□□□ -1.68
GDB1	YPR184W	ACT1	P60010	375 aa	Known RBP	4.58	□□□□□ -1.68
GDB1	YPR184W	YPL062W	Q02781	134 aa		4.58	□□□□□ -1.68
GDB1	YPR184W	YPL066W	Q12194	479 aa		4.58	□□□□□ -1.68
GDB1	YPR184W	YRM1	Q12340	786 aa		4.58	□□□□□ -1.68
GDB1	YPR184W	PAA1	Q12447	191 aa	Known RBP	4.58	□□□□□ -1.68
GDB1	YPR184W	ODC2	Q99297	307 aa		4.58	□□□□□ -1.68
GDB1	YPR184W	RPS13	P05756	151 aa	Known RBP	4.57	□□□□□ -1.68
GDB1	YPR184W	RPS2	P25443	254 aa	Known RBP	4.57	□□□□□ -1.68
GDB1	YPR184W	YKL077W	P36081	392 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	GGC1	P38988	300 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	SNO3	P43544	222 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	YJR012C	P47087	207 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	SDH1	Q00711	640 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	CTL1	Q03220	320 aa	Known RBP	4.57	□□□□□ -1.68
GDB1	YPR184W	NGL2	Q03264	515 aa	Known RBP	4.57	□□□□□ -1.68
GDB1	YPR184W	RCE1	Q03530	315 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	YDR131C	Q03899	556 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	HLR1	Q04429	423 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	YDL218W	Q07629	317 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	RPS23A	P0CX29	145 aa	Known RBP	4.57	□□□□□ -1.68
GDB1	YPR184W	RPS23B	P0CX30	145 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	PRE9	P23638	258 aa	Known RBP	4.57	□□□□□ -1.68
GDB1	YPR184W	LHP1	P33399	275 aa	Known RBP	4.57	□□□□□ -1.68
GDB1	YPR184W	FRM2	P37261	193 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	GEP4	P38812	185 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	BIO3	P50277	480 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	YPL077C	Q02831	240 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	YDC1	Q02896	317 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	UTP15	Q04305	513 aa	Known RBP	4.57	□□□□□ -1.68
GDB1	YPR184W	FIT1	Q04433	528 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	ISR1	Q06098	443 aa	Known RBP	4.57	□□□□□ -1.68
GDB1	YPR184W	YOR186W	Q08560	144 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	YPL247C	Q12523	523 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	QCR7	P00128	127 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	SOD2	P00447	233 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	RPB3	P16370	318 aa	Known RBP	4.57	□□□□□ -1.68
GDB1	YPR184W	ECT1	P33412	323 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	MEP3	P53390	489 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	NCE101	Q02820	53 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	MRPS17	Q03246	237 aa	Predicted RBP	4.57	□□□□□ -1.68
GDB1	YPR184W	YOR105W	Q08504	108 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	YPL162C	Q12042	273 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	YGK3	Q12222	375 aa	Predicted RBP	4.57	□□□□□ -1.68
GDB1	YPR184W	TUB1	P09733	447 aa	Known RBP	4.57	□□□□□ -1.68
GDB1	YPR184W	RRT1	P38192	103 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	YBR184W	P38299	523 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	MCM22	P47167	239 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	PEF1	P53238	335 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	RNH1	Q04740	348 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	COQ11	Q05892	277 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	RNH203	Q12338	110 aa		4.57	□□□□□ -1.68
GDB1	YPR184W	CDC28	P00546	298 aa	Known RBP	4.56	□□□□□ -1.68
GDB1	YPR184W	ATP6	P00854	259 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	UMP1	P38293	148 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	QDR1	P40475	563 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	CFD1	P40558	293 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	GPI14	P47088	403 aa	Known RBP	4.56	□□□□□ -1.68
GDB1	YPR184W	TOS2	P50078	622 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	RHO5	P53879	331 aa	Known RBP	4.56	□□□□□ -1.68
GDB1	YPR184W	YOR289W	Q12012	251 aa	Predicted RBP	4.56	□□□□□ -1.68
GDB1	YPR184W	JID1	Q12350	301 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	YOS1	Q3E834	85 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	DPM1	P14020	267 aa	Known RBP	4.56	□□□□□ -1.68
GDB1	YPR184W	SEC59	P20048	519 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	DOA4	P32571	926 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	KEG1	P43614	200 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
GDB1	YPR184W	IRC23	Q08416	157 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	ISN1	Q99312	450 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	RPL9A	P05738	191 aa	Known RBP	4.56	□□□□□ -1.68
GDB1	YPR184W	EHD3	P28817	500 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	MKK1	P32490	508 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	TCM62	P38228	572 aa	Known RBP	4.56	□□□□□ -1.68
GDB1	YPR184W	BAP3	P41815	604 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	LOC1	P43586	204 aa	Predicted RBP	4.56	□□□□□ -1.68
GDB1	YPR184W	YAR1	P46683	200 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	OST6	Q03723	332 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	RFM1	Q12192	310 aa		4.56	□□□□□ -1.68
GDB1	YPR184W	MSK1	P32048	576 aa		4.55	□□□□□ -1.68
GDB1	YPR184W	NDC1	P32500	655 aa		4.55	□□□□□ -1.68
GDB1	YPR184W	BXI1	P48558	297 aa		4.55	□□□□□ -1.68
GDB1	YPR184W	YGL159W	P53110	370 aa		4.55	□□□□□ -1.68
GDB1	YPR184W	RPN14	P53196	417 aa		4.55	□□□□□ -1.68
GDB1	YPR184W	SYF2	P53277	215 aa	Predicted RBP	4.55	□□□□□ -1.68
GDB1	YPR184W	RBG2	P53295	368 aa	Known RBP	4.55	□□□□□ -1.68
GDB1	YPR184W	INP1	Q03694	420 aa		4.55	□□□□□ -1.68
GDB1	YPR184W	TY1A-DR2	Q03964	440 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 31 ms