RNA–Protein interactions for RNA: YPL124W

SPC29, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC29, Length 762 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC29YPL124W PHB1P40961 287 aa1.48□□□□□ -2.17
SPC29YPL124W SNZ3P43545 298 aa1.48□□□□□ -2.17
SPC29YPL124W GLG2P47011 380 aa1.48□□□□□ -2.17
SPC29YPL124W SNZ2P53824 298 aa1.48□□□□□ -2.17
SPC29YPL124W EBS1Q03466 884 aaKnown RBP1.48□□□□□ -2.17
SPC29YPL124W TVP15Q03860 143 aa1.48□□□□□ -2.17
SPC29YPL124W FUS2Q05670 677 aa1.48□□□□□ -2.17
SPC29YPL124W ATG17Q06410 417 aa1.48□□□□□ -2.17
SPC29YPL124W ABP140Q08641 628 aaKnown RBP1.48□□□□□ -2.17
SPC29YPL124W PRR2Q12310 699 aa1.48□□□□□ -2.17
SPC29YPL124W TIM22Q12328 207 aa1.48□□□□□ -2.17
SPC29YPL124W LSO2Q3E772 92 aaKnown RBP1.48□□□□□ -2.17
SPC29YPL124W AI5_BETAQ9ZZX0 354 aa1.48□□□□□ -2.17
SPC29YPL124W STH1P32597 1359 aa1.47□□□□□ -2.17
SPC29YPL124W DPB2P24482 689 aaPredicted RBP1.47□□□□□ -2.17
SPC29YPL124W RPS5P26783 225 aaKnown RBP1.47□□□□□ -2.17
SPC29YPL124W HOM6P31116 359 aaKnown RBP1.47□□□□□ -2.17
SPC29YPL124W CAT2P32796 670 aaKnown RBP1.47□□□□□ -2.17
SPC29YPL124W SSO1P32867 290 aa1.47□□□□□ -2.17
SPC29YPL124W GDH2P33327 1092 aaKnown RBP1.47□□□□□ -2.17
SPC29YPL124W JEN1P36035 616 aa1.47□□□□□ -2.17
SPC29YPL124W LDB7P38210 180 aa1.47□□□□□ -2.17
SPC29YPL124W TRM7P38238 310 aaKnown RBP1.47□□□□□ -2.17
SPC29YPL124W PHO89P38361 574 aa1.47□□□□□ -2.17
SPC29YPL124W RTR1P40084 226 aaPredicted RBP1.47□□□□□ -2.17
SPC29YPL124W TMA22P47089 198 aaPredicted RBP1.47□□□□□ -2.17
SPC29YPL124W HOC1P47124 396 aa1.47□□□□□ -2.17
SPC29YPL124W VMA10P48836 114 aaKnown RBP1.47□□□□□ -2.17
SPC29YPL124W SYF2P53277 215 aaPredicted RBP1.47□□□□□ -2.17
SPC29YPL124W FMP41P53889 259 aaKnown RBP1.47□□□□□ -2.17
SPC29YPL124W ASI3P53983 676 aa1.47□□□□□ -2.17
SPC29YPL124W GIM5Q04493 163 aa1.47□□□□□ -2.17
SPC29YPL124W YPL119C-AQ3E751 87 aa1.47□□□□□ -2.17
SPC29YPL124W CDC36P06100 191 aaPredicted RBP1.46□□□□□ -2.18
SPC29YPL124W MATALPHA1P0CY06 175 aa1.46□□□□□ -2.18
SPC29YPL124W HMLALPHA1P0CY07 175 aa1.46□□□□□ -2.18
SPC29YPL124W POX1P13711 748 aa1.46□□□□□ -2.18
SPC29YPL124W RPO26P20435 155 aa1.46□□□□□ -2.18
SPC29YPL124W BMH1P29311 267 aaKnown RBP1.46□□□□□ -2.18
SPC29YPL124W MEI4P29467 408 aa1.46□□□□□ -2.18
SPC29YPL124W ERG2P32352 222 aa1.46□□□□□ -2.18
SPC29YPL124W UBC6P33296 250 aaPredicted RBP1.46□□□□□ -2.18
SPC29YPL124W CPR5P35176 225 aa1.46□□□□□ -2.18
SPC29YPL124W HMT1P38074 348 aa1.46□□□□□ -2.18
SPC29YPL124W FZO1P38297 855 aa1.46□□□□□ -2.18
SPC29YPL124W YHL049CP38722 271 aa1.46□□□□□ -2.18
SPC29YPL124W VMA22P38784 181 aa1.46□□□□□ -2.18
SPC29YPL124W THO1P40040 218 aaKnown RBP1.46□□□□□ -2.18
SPC29YPL124W OTU1P43558 301 aa1.46□□□□□ -2.18
SPC29YPL124W SNX4P47057 423 aa1.46□□□□□ -2.18
SPC29YPL124W HAM1P47119 197 aaKnown RBP1.46□□□□□ -2.18
SPC29YPL124W USE1P53146 245 aa1.46□□□□□ -2.18
SPC29YPL124W SLX9P53251 210 aaPredicted RBP1.46□□□□□ -2.18
SPC29YPL124W SSU72P53538 206 aaPredicted RBP1.46□□□□□ -2.18
SPC29YPL124W SWT21P53873 357 aaPredicted RBP1.46□□□□□ -2.18
SPC29YPL124W NOP13P53883 403 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
SPC29YPL124W AAH1P53909 347 aa1.46□□□□□ -2.18
SPC29YPL124W BNA7Q04066 261 aa1.46□□□□□ -2.18
SPC29YPL124W MYO5Q04439 1219 aaKnown RBP1.46□□□□□ -2.18
SPC29YPL124W GET4Q12125 312 aa1.46□□□□□ -2.18
SPC29YPL124W YCT1Q12235 531 aa1.46□□□□□ -2.18
SPC29YPL124W SNU23Q12368 194 aaPredicted RBP1.46□□□□□ -2.18
SPC29YPL124W ATG5Q12380 294 aa1.46□□□□□ -2.18
SPC29YPL124W GIS3Q12418 502 aa1.46□□□□□ -2.18
SPC29YPL124W NOT5Q12514 560 aaPredicted RBP1.46□□□□□ -2.18
SPC29YPL124W CFT1Q06632 1357 aaKnown RBP1.46□□□□□ -2.18
SPC29YPL124W SWI1P09547 1314 aa1.45□□□□□ -2.18
SPC29YPL124W HIS3P06633 220 aa1.45□□□□□ -2.18
SPC29YPL124W ARG80P07249 177 aa1.45□□□□□ -2.18
SPC29YPL124W COS2P0CX12 379 aa1.45□□□□□ -2.18
SPC29YPL124W COS3P0CX13 379 aa1.45□□□□□ -2.18
SPC29YPL124W TCP1P12612 559 aaKnown RBP1.45□□□□□ -2.18
SPC29YPL124W RPL24BP24000 155 aaKnown RBP1.45□□□□□ -2.18
SPC29YPL124W PPA2P28239 310 aa1.45□□□□□ -2.18
SPC29YPL124W EHD3P28817 500 aa1.45□□□□□ -2.18
SPC29YPL124W ATP7P30902 174 aa1.45□□□□□ -2.18
SPC29YPL124W CSG2P35206 410 aa1.45□□□□□ -2.18
SPC29YPL124W CAF4P36130 643 aa1.45□□□□□ -2.18
SPC29YPL124W HEK2P38199 381 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
SPC29YPL124W YAP3P38749 330 aa1.45□□□□□ -2.18
SPC29YPL124W AGE2P40529 298 aa1.45□□□□□ -2.18
SPC29YPL124W RPE1P46969 238 aa1.45□□□□□ -2.18
SPC29YPL124W LSM1P47017 172 aaKnown RBP1.45□□□□□ -2.18
SPC29YPL124W RPC17P47076 161 aa1.45□□□□□ -2.18
SPC29YPL124W YJR079WP47126 109 aa1.45□□□□□ -2.18
SPC29YPL124W BAT2P47176 376 aaKnown RBP1.45□□□□□ -2.18
SPC29YPL124W RMR1P53060 241 aa1.45□□□□□ -2.18
SPC29YPL124W ALG9P53868 555 aaKnown RBP1.45□□□□□ -2.18
SPC29YPL124W FYV6P53913 173 aa1.45□□□□□ -2.18
SPC29YPL124W YMR226CQ05016 267 aaKnown RBP1.45□□□□□ -2.18
SPC29YPL124W PEX10Q05568 337 aa1.45□□□□□ -2.18
SPC29YPL124W YPR098CQ06089 161 aa1.45□□□□□ -2.18
SPC29YPL124W SPO77Q06134 477 aa1.45□□□□□ -2.18
SPC29YPL124W COQ10Q08058 207 aa1.45□□□□□ -2.18
SPC29YPL124W RRS1Q08746 203 aaKnown RBP1.45□□□□□ -2.18
SPC29YPL124W YPL150WQ12152 901 aa1.45□□□□□ -2.18
SPC29YPL124W NCB2Q92317 146 aa1.45□□□□□ -2.18
SPC29YPL124W RPL27AP0C2H6 136 aaKnown RBP1.44□□□□□ -2.18
SPC29YPL124W RPL27BP0C2H7 136 aaKnown RBP1.44□□□□□ -2.18
SPC29YPL124W PBN1P25580 416 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms