RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C YDR124WQ04608 324 aa2.28□□□□□ -2.04
DNL4YOR005C YMR254CQ04838 102 aa2.28□□□□□ -2.04
DNL4YOR005C SYC1Q08553 188 aaPredicted RBP2.28□□□□□ -2.04
DNL4YOR005C YPQ1Q12010 308 aa2.28□□□□□ -2.04
DNL4YOR005C MDM32Q12171 622 aa2.28□□□□□ -2.04
DNL4YOR005C RGT2Q12300 763 aa2.28□□□□□ -2.04
DNL4YOR005C YDL199CQ12407 687 aa2.28□□□□□ -2.04
DNL4YOR005C SUS1Q6WNK7 96 aa2.28□□□□□ -2.04
DNL4YOR005C TOR1P35169 2470 aa2.28□□□□□ -2.04
DNL4YOR005C LAA1P39526 2014 aa2.28□□□□□ -2.05
DNL4YOR005C TFS1P14306 219 aa2.27□□□□□ -2.05
DNL4YOR005C DAL81P21657 970 aa2.27□□□□□ -2.05
DNL4YOR005C AIM17P23180 465 aaKnown RBP2.27□□□□□ -2.05
DNL4YOR005C PBN1P25580 416 aa2.27□□□□□ -2.05
DNL4YOR005C TAH1P25638 111 aaPredicted RBP2.27□□□□□ -2.05
DNL4YOR005C PMT2P31382 759 aa2.27□□□□□ -2.05
DNL4YOR005C PTM1P32857 523 aa2.27□□□□□ -2.05
DNL4YOR005C JEN1P36035 616 aa2.27□□□□□ -2.05
DNL4YOR005C LDB7P38210 180 aa2.27□□□□□ -2.05
DNL4YOR005C YBR137WP38276 179 aa2.27□□□□□ -2.05
DNL4YOR005C FLO5P38894 1075 aa2.27□□□□□ -2.05
DNL4YOR005C AZF1P41696 914 aa2.27□□□□□ -2.05
DNL4YOR005C CDC14Q00684 551 aa2.27□□□□□ -2.05
DNL4YOR005C YPL080CQ02826 108 aa2.27□□□□□ -2.05
DNL4YOR005C TDA1Q03533 586 aa2.27□□□□□ -2.05
DNL4YOR005C ADH6Q04894 360 aaKnown RBP2.27□□□□□ -2.05
DNL4YOR005C YLR446WQ06204 433 aa2.27□□□□□ -2.05
DNL4YOR005C ERP3Q12403 225 aa2.27□□□□□ -2.05
DNL4YOR005C SET6Q12529 373 aa2.27□□□□□ -2.05
DNL4YOR005C YKL018C-AQ3E7A7 99 aa2.27□□□□□ -2.05
DNL4YOR005C SPS2P08459 502 aa2.27□□□□□ -2.05
DNL4YOR005C CNB1P25296 175 aa2.27□□□□□ -2.05
DNL4YOR005C ECM31P38122 312 aa2.27□□□□□ -2.05
DNL4YOR005C SHE3P38272 425 aaKnown RBP2.27□□□□□ -2.05
DNL4YOR005C GRE3P38715 327 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
DNL4YOR005C YHR035WP38769 630 aa2.27□□□□□ -2.05
DNL4YOR005C VAB2P40003 282 aa2.27□□□□□ -2.05
DNL4YOR005C YJL218WP40892 196 aaKnown RBP2.27□□□□□ -2.05
DNL4YOR005C PMT4P46971 762 aa2.27□□□□□ -2.05
DNL4YOR005C YAE1P47118 141 aaPredicted RBP2.27□□□□□ -2.05
DNL4YOR005C TIS11P47977 285 aa2.27□□□□□ -2.05
DNL4YOR005C LSM7P53905 115 aaKnown RBP2.27□□□□□ -2.05
DNL4YOR005C YPL077CQ02831 240 aa2.27□□□□□ -2.05
DNL4YOR005C YHC1Q05900 231 aaKnown RBP2.27□□□□□ -2.05
DNL4YOR005C SAL1D6W196 494 aa2.27□□□□□ -2.05
DNL4YOR005C SPT3P06844 337 aa2.27□□□□□ -2.05
DNL4YOR005C RPL4AP10664 362 aaKnown RBP2.27□□□□□ -2.05
DNL4YOR005C PET54P10834 293 aa2.27□□□□□ -2.05
DNL4YOR005C PTP1P25044 335 aa2.27□□□□□ -2.05
DNL4YOR005C YBR063CP38083 404 aa2.27□□□□□ -2.05
DNL4YOR005C RRP3P38712 501 aaKnown RBP2.27□□□□□ -2.05
DNL4YOR005C COS8P38723 381 aa2.27□□□□□ -2.05
DNL4YOR005C YPT35P38815 214 aaKnown RBP2.27□□□□□ -2.05
DNL4YOR005C NVJ1P38881 321 aa2.27□□□□□ -2.05
DNL4YOR005C COG3P40094 801 aa2.27□□□□□ -2.05
DNL4YOR005C YER186CP40101 306 aa2.27□□□□□ -2.05
DNL4YOR005C PRE6P40303 254 aaKnown RBP2.27□□□□□ -2.05
DNL4YOR005C GDS1P41913 522 aa2.27□□□□□ -2.05
DNL4YOR005C RPL4BP49626 362 aaKnown RBP2.27□□□□□ -2.05
DNL4YOR005C PRM8P53174 237 aa2.27□□□□□ -2.05
DNL4YOR005C CAF40P53829 373 aa2.27□□□□□ -2.05
DNL4YOR005C IGO1P53897 168 aa2.27□□□□□ -2.05
DNL4YOR005C ERG13P54839 491 aaKnown RBP2.27□□□□□ -2.05
DNL4YOR005C PRM15Q03262 622 aa2.27□□□□□ -2.05
DNL4YOR005C BNA7Q04066 261 aa2.27□□□□□ -2.05
DNL4YOR005C RTN1Q04947 295 aaKnown RBP2.27□□□□□ -2.05
DNL4YOR005C LDB18Q07887 179 aa2.27□□□□□ -2.05
DNL4YOR005C YOR289WQ12012 251 aaPredicted RBP2.27□□□□□ -2.05
DNL4YOR005C MEX67Q99257 599 aaKnown RBP2.27□□□□□ -2.05
DNL4YOR005C RAS2P01120 322 aaKnown RBP2.26□□□□□ -2.05
DNL4YOR005C YGL041W-AP0C5N3 154 aa2.26□□□□□ -2.05
DNL4YOR005C NHP6BP11633 99 aaKnown RBP2.26□□□□□ -2.05
DNL4YOR005C MDM10P18409 493 aa2.26□□□□□ -2.05
DNL4YOR005C GLN3P18494 730 aa2.26□□□□□ -2.05
DNL4YOR005C ZRC1P20107 442 aa2.26□□□□□ -2.05
DNL4YOR005C ARO7P32178 256 aa2.26□□□□□ -2.05
DNL4YOR005C ZRT1P32804 376 aa2.26□□□□□ -2.05
DNL4YOR005C SCO2P38072 301 aa2.26□□□□□ -2.05
DNL4YOR005C PFS1P38872 237 aa2.26□□□□□ -2.05
DNL4YOR005C YMR144WP40214 342 aaKnown RBP2.26□□□□□ -2.05
DNL4YOR005C HIT1P46973 164 aa2.26□□□□□ -2.05
DNL4YOR005C IKS1P47042 667 aa2.26□□□□□ -2.05
DNL4YOR005C LSM8P47093 109 aaKnown RBP2.26□□□□□ -2.05
DNL4YOR005C JHD2P47156 728 aaPredicted RBP2.26□□□□□ -2.05
DNL4YOR005C TRM112P53738 135 aaPredicted RBP2.26□□□□□ -2.05
DNL4YOR005C GRX5Q02784 150 aa2.26□□□□□ -2.05
DNL4YOR005C SPO77Q06134 477 aa2.26□□□□□ -2.05
DNL4YOR005C SWC7Q06707 132 aa2.26□□□□□ -2.05
DNL4YOR005C ATP14Q12349 124 aa2.26□□□□□ -2.05
DNL4YOR005C TIM9O74700 87 aa2.26□□□□□ -2.05
DNL4YOR005C HIS1P00498 297 aaKnown RBP2.26□□□□□ -2.05
DNL4YOR005C REP2P03872 296 aa2.26□□□□□ -2.05
DNL4YOR005C RPL31AP0C2H8 113 aaKnown RBP2.26□□□□□ -2.05
DNL4YOR005C YFL068WP0CX99 160 aa2.26□□□□□ -2.05
DNL4YOR005C YLL066W-AP0CY00 160 aa2.26□□□□□ -2.05
DNL4YOR005C YLL067W-AP0CY01 160 aa2.26□□□□□ -2.05
DNL4YOR005C PPA2P28239 310 aa2.26□□□□□ -2.05
DNL4YOR005C MDM31P38880 579 aa2.26□□□□□ -2.05
DNL4YOR005C SEN34P39707 275 aa2.26□□□□□ -2.05
DNL4YOR005C YER184CP39961 794 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms