RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	UTP30	P36144	274 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	DAD2	P36162	133 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	MRPS9	P38120	278 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	MIX23	P38162	196 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	YBR032W	P38223	100 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	RPF1	P38805	295 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	AIM18	P38884	321 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	VFA1	P40080	203 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	IKS1	P47042	667 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	AIM24	P47127	394 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	MGA1	P53050	456 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	SLD3	P53135	668 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	EFR3	Q03653	782 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	MRPL35	Q06678	367 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	MCH4	Q08268	501 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	BSC6	Q08280	497 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	YPL199C	Q08954	240 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	DFG16	Q99234	619 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	ALG7	P07286	448 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	RPL3	P14126	387 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	DAL2	P25335	343 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	YJU3	P28321	313 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	HRR25	P29295	494 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	URA10	P30402	227 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	YKL162C	P36052	402 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	PRS4	P38063	326 aa	Predicted RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	RRT2	P38332	387 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	LAG1	P38703	411 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	LYS1	P38998	373 aa	RIP-Chip data	1.35	□□□□□ -2.19	not detected
SSK2	YNR031C	PEX7	P39108	375 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	GDI1	P39958	451 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	RMD6	P39975	231 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	SMB1	P40018	196 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	YIL054W	P40524	105 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	CDC1	P40986	491 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	YJR011C	P47086	261 aa	Predicted RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	YJR096W	P47137	282 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	RIB4	P50861	169 aa	Predicted RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	YNR064C	P53750	290 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	ECM9	Q02202	377 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	PET191	Q02772	108 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	DPP1	Q05521	289 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	MRH1	Q12117	320 aa	Predicted RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	BSC1	Q12140	328 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	UPC2	Q12151	913 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	YLR361C-A	Q3E795	98 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	YBR126W-A	Q8TGU7	68 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	RIB3	Q99258	208 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	PET20	Q99373	253 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	BPH1	P25356	2167 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	ADH2	P00331	348 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	YSF3	P0C074	85 aa	Predicted RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	RPS4A	P0CX35	261 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	RPS4B	P0CX36	261 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	MRP2	P10663	115 aa	Predicted RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	SAT4	P25333	603 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	BUB3	P26449	341 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	APE2	P32454	952 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	YKL107W	P34251	309 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	YKR041W	P36134	250 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	PTC7	P38797	343 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	1.35	□□□□□ -2.19	not detected
SSK2	YNR031C	YGR201C	P42936	225 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	LIA1	P47120	325 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	GTR2	P53290	341 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	HHT1	P61830	136 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	CWC27	Q02770	301 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	EBS1	Q03466	884 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	GTO3	Q04806	366 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	MRPL51	Q06090	140 aa	Predicted RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	YPR127W	Q06494	345 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	YET3	Q07451	203 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	ZEO1	Q08245	113 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	YPL245W	Q12179	454 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	TPT1	Q12272	230 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	AHA1	Q12449	350 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	YOR304C-A	O14468	76 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	BI2	P03873	423 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	TPK3	P05986	398 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	1.35	□□□□□ -2.19	not detected
SSK2	YNR031C	SNF6	P18888	332 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	YEF1	P32622	495 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	CLB6	P32943	380 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	YOR062C	P36025	268 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	SRP102	P36057	244 aa	Predicted RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	AIM29	P36154	155 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	ECM14	P38836	430 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	LCP5	P40079	357 aa	Predicted RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	PFK26	P40433	827 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	MSY1	P48527	492 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	CWC23	P52868	283 aa	Predicted RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	YGL204C	P53089	101 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	HSP31	Q04432	237 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	PEX10	Q05568	337 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	YPQ1	Q12010	308 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	YPL162C	Q12042	273 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	YDL085C-A	Q3E7B7	68 aa	Known RBP	1.35	□□□□□ -2.19
SSK2	YNR031C	YBL112C	Q3E7Y4	105 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	BI3	Q9ZZW7	517 aa		1.35	□□□□□ -2.19
SSK2	YNR031C	URA2	P07259	2214 aa	Known RBP	1.35	□□□□□ -2.19

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms