RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C EMC5P40540 141 aa7.68□□□□□ -1.18
RPD3YNL330C YGR066CP53242 292 aa7.68□□□□□ -1.18
RPD3YNL330C PDR16P53860 351 aaKnown RBP7.68□□□□□ -1.18
RPD3YNL330C FMP41P53889 259 aaKnown RBP7.68□□□□□ -1.18
RPD3YNL330C AAH1P53909 347 aa7.68□□□□□ -1.18
RPD3YNL330C YDR248CQ03786 193 aa7.68□□□□□ -1.18
RPD3YNL330C CAB5Q03941 241 aa7.68□□□□□ -1.18
RPD3YNL330C HNT3Q08702 217 aa7.68□□□□□ -1.18
RPD3YNL330C SCP1Q08873 200 aa7.68□□□□□ -1.18
RPD3YNL330C SGA1P08019 549 aa7.67□□□□□ -1.18
RPD3YNL330C RFA3P26755 122 aaKnown RBP7.67□□□□□ -1.18
RPD3YNL330C MTC7P32633 139 aa7.67□□□□□ -1.18
RPD3YNL330C VAM7P32912 316 aa7.67□□□□□ -1.18
RPD3YNL330C SHG1P38337 142 aa7.67□□□□□ -1.18
RPD3YNL330C RPL13BP40212 199 aaKnown RBP7.67□□□□□ -1.18
RPD3YNL330C PGD1P40356 397 aa7.67□□□□□ -1.18
RPD3YNL330C POG1P40473 351 aa7.67□□□□□ -1.18
RPD3YNL330C YIL086CP40503 102 aa7.67□□□□□ -1.18
RPD3YNL330C MRX5P47007 382 aa7.67□□□□□ -1.18
RPD3YNL330C UBP8P50102 471 aa7.67□□□□□ -1.18
RPD3YNL330C SUN4P53616 420 aa7.67□□□□□ -1.18
RPD3YNL330C YNR014WP53719 212 aa7.67□□□□□ -1.18
RPD3YNL330C NIS1P53939 407 aa7.67□□□□□ -1.18
RPD3YNL330C YMR210WQ03649 449 aa7.67□□□□□ -1.18
RPD3YNL330C DIC1Q06143 298 aa7.67□□□□□ -1.18
RPD3YNL330C SDO1Q07953 250 aaKnown RBP7.67□□□□□ -1.18
RPD3YNL330C TGS1Q12052 315 aa7.67□□□□□ -1.18
RPD3YNL330C VAM3Q12241 283 aa7.67□□□□□ -1.18
RPD3YNL330C RPL13AQ12690 199 aaPredicted RBP7.67□□□□□ -1.18
RPD3YNL330C YLR146W-AQ2V2P1 62 aa7.67□□□□□ -1.18
RPD3YNL330C SCEIP03882 235 aa7.66□□□□□ -1.18
RPD3YNL330C MSK1P32048 576 aa7.66□□□□□ -1.18
RPD3YNL330C ERG3P32353 365 aa7.66□□□□□ -1.18
RPD3YNL330C ARO4P32449 370 aaKnown RBP7.66□□□□□ -1.18
RPD3YNL330C PMT3P47190 753 aa7.66□□□□□ -1.18
RPD3YNL330C NUP42P49686 430 aaKnown RBP7.66□□□□□ -1.18
RPD3YNL330C YCL001W-AP87012 153 aa7.66□□□□□ -1.18
RPD3YNL330C RTT103Q05543 409 aa7.66□□□□□ -1.18
RPD3YNL330C YPR147CQ06522 304 aaKnown RBP7.66□□□□□ -1.18
RPD3YNL330C RRT7Q07829 113 aa7.66□□□□□ -1.18
RPD3YNL330C MCH4Q08268 501 aa7.66□□□□□ -1.18
RPD3YNL330C TAD3Q9URQ3 322 aa7.66□□□□□ -1.18
RPD3YNL330C Q0142Q9ZZW4 58 aa7.66□□□□□ -1.18
RPD3YNL330C TY1A-DR4O74302 440 aa7.65□□□□□ -1.18
RPD3YNL330C TY1A-AP0CX57 440 aa7.65□□□□□ -1.18
RPD3YNL330C TY1A-PR1P0CX58 440 aa7.65□□□□□ -1.18
RPD3YNL330C TY1A-ORP0CX59 440 aa7.65□□□□□ -1.18
RPD3YNL330C TY1A-PR2P0CX60 440 aa7.65□□□□□ -1.18
RPD3YNL330C TY1A-DR5P0CX65 440 aa7.65□□□□□ -1.18
RPD3YNL330C TY1A-ER2P0CX66 440 aa7.65□□□□□ -1.18
RPD3YNL330C TY1A-GR3P0CX67 440 aa7.65□□□□□ -1.18
RPD3YNL330C TY1A-LR1P0CX68 440 aa7.65□□□□□ -1.18
RPD3YNL330C TY1A-MR2P0CX69 440 aa7.65□□□□□ -1.18
RPD3YNL330C GLK1P17709 500 aaKnown RBP7.65□□□□□ -1.18
RPD3YNL330C EHD3P28817 500 aa7.65□□□□□ -1.18
RPD3YNL330C EMP70P32802 667 aa7.65□□□□□ -1.18
RPD3YNL330C APD1P38281 316 aa7.65□□□□□ -1.18
RPD3YNL330C PRS3P38689 320 aaKnown RBP7.65□□□□□ -1.18
RPD3YNL330C SPG5P42933 373 aa7.65□□□□□ -1.18
RPD3YNL330C TY1A-JR2P47099 440 aa7.65□□□□□ -1.18
RPD3YNL330C MOG1P47123 218 aa7.65□□□□□ -1.18
RPD3YNL330C YGR026WP53217 278 aa7.65□□□□□ -1.18
RPD3YNL330C CUZ1P53899 274 aa7.65□□□□□ -1.18
RPD3YNL330C RNH201P53942 307 aa7.65□□□□□ -1.18
RPD3YNL330C HAS1Q03532 505 aaKnown RBP7.65□□□□□ -1.18
RPD3YNL330C TY1A-DR1Q03856 440 aa7.65□□□□□ -1.18
RPD3YNL330C TY1A-ML1Q04706 440 aaKnown RBP7.65□□□□□ -1.18
RPD3YNL330C TY1A-BRQ12217 440 aa7.65□□□□□ -1.18
RPD3YNL330C TY1A-NL2Q12470 440 aa7.65□□□□□ -1.18
RPD3YNL330C TY1A-GR2Q12485 440 aa7.65□□□□□ -1.18
RPD3YNL330C LSO2Q3E772 92 aaKnown RBP7.65□□□□□ -1.18
RPD3YNL330C CWP1P28319 239 aa7.64□□□□□ -1.19
RPD3YNL330C HSP150P32478 413 aa7.64□□□□□ -1.19
RPD3YNL330C YBL010CP32788 280 aa7.64□□□□□ -1.19
RPD3YNL330C COS9P36034 407 aa7.64□□□□□ -1.19
RPD3YNL330C GPI16P38875 610 aa7.64□□□□□ -1.19
RPD3YNL330C QRI1P43123 477 aaKnown RBP7.64□□□□□ -1.19
RPD3YNL330C AGX1P43567 385 aa7.64□□□□□ -1.19
RPD3YNL330C YJR115WP47152 169 aa7.64□□□□□ -1.19
RPD3YNL330C TRM9P49957 279 aa7.64□□□□□ -1.19
RPD3YNL330C UFD1P53044 361 aa7.64□□□□□ -1.19
RPD3YNL330C LCL3P53153 274 aa7.64□□□□□ -1.19
RPD3YNL330C ALG9P53868 555 aaKnown RBP7.64□□□□□ -1.19
RPD3YNL330C APJ1P53940 528 aa7.64□□□□□ -1.19
RPD3YNL330C EST3Q03096 181 aa7.64□□□□□ -1.19
RPD3YNL330C TPP1Q03796 238 aa7.64□□□□□ -1.19
RPD3YNL330C AGE1Q04412 482 aa7.64□□□□□ -1.19
RPD3YNL330C SEI1Q06058 285 aa7.64□□□□□ -1.19
RPD3YNL330C YPD1Q07688 167 aa7.64□□□□□ -1.19
RPD3YNL330C DAP1Q12091 152 aa7.64□□□□□ -1.19
RPD3YNL330C PRP46Q12417 451 aaPredicted RBP7.64□□□□□ -1.19
RPD3YNL330C ERP4Q12450 207 aa7.64□□□□□ -1.19
RPD3YNL330C PAR32Q12515 295 aaKnown RBP7.64□□□□□ -1.19
RPD3YNL330C QCR2P07257 368 aa7.63□□□□□ -1.19
RPD3YNL330C FAA1P30624 700 aaKnown RBP7.63□□□□□ -1.19
RPD3YNL330C NUD1P32336 851 aa7.63□□□□□ -1.19
RPD3YNL330C ADO1P47143 340 aaKnown RBP7.63□□□□□ -1.19
RPD3YNL330C HSV2P50079 448 aaPredicted RBP7.63□□□□□ -1.19
RPD3YNL330C SKP1P52286 194 aa7.63□□□□□ -1.19
RPD3YNL330C PKP2P53170 491 aa7.63□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms